EWM27465.1, cds3210 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|585109725|gb|EWM27465.1| (dual specificity protein phosphatase 12 [Nannochloropsis gaditana]) HSP 1 Score: 396.741 bits (1018), Expect = 8.058e-140 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query: 1 MTERQDSIVDPTKSTCFTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRKGTEETEGLMVVDFGAQVRKNLEVPQQQENCAEKDKTREGSEEATRS 192
MTERQDSIVDPTKSTCFTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRKGTEETEGLMVVDFGAQVRKNLEVPQQQENCAEKDKTREGSEEATRS
Sbjct: 1 MTERQDSIVDPTKSTCFTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRKGTEETEGLMVVDFGAQVRKNLEVPQQQENCAEKDKTREGSEEATRS 192
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|553186647|ref|XP_005854460.1| (dual specificity protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294600|gb|EKU21900.1| dual specificity protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 121.324 bits (303), Expect = 5.861e-33 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 101 IEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRKGTEETEGLMVV 157
IEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRKGTEETEGLMVV
Sbjct: 1 IEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRKGTEETEGLMVV 57
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|1173936257|gb|OQR87240.1| (hypothetical protein ACHHYP_09329 [Achlya hypogyna]) HSP 1 Score: 107.071 bits (266), Expect = 2.931e-26 Identity = 55/130 (42.31%), Postives = 74/130 (56.92%), Query Frame = 0
Query: 17 FTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRK 146
+ CR+CR LF+ +DL H RI+ RK + + + H C+SYFL E +L W+ AL A EGKL CP A+C ARLGSF+WSG+QCSCG+WV P++Q+ S+VD K
Sbjct: 15 YMCRMCRVKLFTSEDLLEHDPHQHRISLRKTIKERNPNGLH--ECSSYFLTE----TLPWMDEALLA------------------EGKLHCPVAKCNARLGSFDWSGSQCSCGTWVTPSIQITKSRVDIK 120
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|301112517|ref|XP_002998029.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112323|gb|EEY70375.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 99.7525 bits (247), Expect = 2.128e-23 Identity = 53/136 (38.97%), Postives = 74/136 (54.41%), Query Frame = 0
Query: 10 DPTKSTCFTCRLCRSALFSDKDLEPHATGAQRIN-RRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVD 144
D + T F C+ CRS LF L PH +I+ RRK+ +AH+ AC+SYFL E +L W+ AL A EGK+ CP +C +RLG+ WSG+QCSCG+WV P++++ S+VD
Sbjct: 10 DESSVTKFACKKCRSVLFKSDQLTPHEPEQHQISTRRKLKDLKHQVSAHV-ACSSYFLEE----TLPWMDEALLA------------------EGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVD 122
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|1173949337|gb|OQR97387.1| (hypothetical protein THRCLA_21939 [Thraustotheca clavata]) HSP 1 Score: 98.2117 bits (243), Expect = 5.954e-23 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 0
Query: 17 FTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRK 146
F CR+CR LF+ DL H RI RK + + + + C+SYFL++ EW+ L A EGKL CP +C ARLGSF WSG+QCSCG+WV P++Q+ S+VD K
Sbjct: 5 FVCRMCRVPLFTSVDLMEHEPHQHRIALRK--KMKEGNINGVVECSSYFLSDTK----EWMDENLLA------------------EGKLHCPKQKCNARLGSFEWSGSQCSCGTWVTPSIQITKSRVDIK 110
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|698803534|ref|XP_009834796.1| (hypothetical protein H257_10057 [Aphanomyces astaci] >gi|574110165|gb|ETV75665.1| hypothetical protein H257_10057 [Aphanomyces astaci]) HSP 1 Score: 98.2117 bits (243), Expect = 1.286e-22 Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 0
Query: 17 FTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVDRKGTEETEGLMV 156
F CR+CR LF+ DL H +I++RK + +S C+S+FL +++ EW+ DEA + EGKL+CP A+C ARLGSF WSG+QCSCG+WV P+VQ S+VD K + + V
Sbjct: 11 FVCRMCRVLLFTSDDLLQHEPQKHQISQRK---KLKESKLGAVDCSSFFL----VDTKEWM-------DEASLA-----------EGKLLCPVAKCNARLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVKLKMNIQAVYV 125
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|568029631|gb|ETM03552.1| (hypothetical protein L917_00244 [Phytophthora parasitica]) HSP 1 Score: 97.8265 bits (242), Expect = 1.956e-22 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 10 DPTKSTCFTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVD 144
D + T F C+ CR LF+ + L PH +I+ R+ + + S AC+SYFL E +L W+ AL A EGK+ CP +C +RLG+ WSG+QCSCG+WV P++++ S+VD
Sbjct: 24 DASSVTKFACKKCRCVLFTSEQLMPHEPEQHQISARRKLKDLKHSVGANVACSSYFLEE----TLSWMDEALLA------------------EGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVD 136
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|570338179|gb|ETO86127.1| (hypothetical protein F444_00282 [Phytophthora parasitica P1976]) HSP 1 Score: 97.8265 bits (242), Expect = 1.977e-22 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 10 DPTKSTCFTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVD 144
D + T F C+ CR LF+ + L PH +I+ R+ + + S AC+SYFL E +L W+ AL A EGK+ CP +C +RLG+ WSG+QCSCG+WV P++++ S+VD
Sbjct: 24 DASSVTKFACKKCRCVLFTSEQLMPHEPEQHQISARRKLKDLKHSVGANVACSSYFLEE----TLSWMDEALLA------------------EGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVD 136
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|568060285|gb|ETM56824.1| (hypothetical protein L914_00266, partial [Phytophthora parasitica]) HSP 1 Score: 97.4413 bits (241), Expect = 2.035e-22 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 10 DPTKSTCFTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVD 144
D + T F C+ CR LF+ + L PH +I+ R+ + + S AC+SYFL E +L W+ AL A EGK+ CP +C +RLG+ WSG+QCSCG+WV P++++ S+VD
Sbjct: 16 DASSVTKFACKKCRCVLFTSEQLMPHEPEQHQISARRKLKDLKHSVGANVACSSYFLEE----TLSWMDEALLA------------------EGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVD 128
BLAST of EWM27465.1 vs. NCBI_GenBank
Match: gi|567972170|gb|ETK97160.1| (hypothetical protein L915_00260 [Phytophthora parasitica]) HSP 1 Score: 97.8265 bits (242), Expect = 2.063e-22 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 10 DPTKSTCFTCRLCRSALFSDKDLEPHATGAQRINRRKVGRSVDDSAAHIQACTSYFLNEAAMESLEWVRAALQAHDEAIASNSAVQTSSESIEGKLVCPNARCAARLGSFNWSGTQCSCGSWVVPAVQVVGSKVD 144
D + T F C+ CR LF+ + L PH +I+ R+ + + S AC+SYFL E +L W+ AL A EGK+ CP +C +RLG+ WSG+QCSCG+WV P++++ S+VD
Sbjct: 24 DASSVTKFACKKCRCVLFTSEQLMPHEPEQHQISARRKLKDLKHSVGANVACSSYFLEE----TLSWMDEALLA------------------EGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVD 136 The following BLAST results are available for this feature:
BLAST of EWM27465.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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