EWM27474.1, cds3196 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|585109735|gb|EWM27474.1| (smad nuclear interacting protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 760.755 bits (1963), Expect = 0.000e+0 Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0
Query: 1 MVTGGAAESRTRRPSSLHSICFLSPRPCRMPRSRSRSRSRSLHRQRKRSGSRSRYGTSSPLSSSRYHSPHRGGDQKGQSRRRRRSQESEEGDRDRRRRHRGLEREESPAPGGGNQAQGQRSRWEKGRGRQEGLSGGENGGNGRYEEERRDISLQERERDGRGARLRKSTEARAQAGAGREREALVPGGEPSRGQEERYEWGKPAISPLNGDASSRGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRHGVADLKVEHPSCSKQHAVLQFRQKHEGAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHESLVGSS 382
MVTGGAAESRTRRPSSLHSICFLSPRPCRMPRSRSRSRSRSLHRQRKRSGSRSRYGTSSPLSSSRYHSPHRGGDQKGQSRRRRRSQESEEGDRDRRRRHRGLEREESPAPGGGNQAQGQRSRWEKGRGRQEGLSGGENGGNGRYEEERRDISLQERERDGRGARLRKSTEARAQAGAGREREALVPGGEPSRGQEERYEWGKPAISPLNGDASSRGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRHGVADLKVEHPSCSKQHAVLQFRQKHEGAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHESLVGSS
Sbjct: 1 MVTGGAAESRTRRPSSLHSICFLSPRPCRMPRSRSRSRSRSLHRQRKRSGSRSRYGTSSPLSSSRYHSPHRGGDQKGQSRRRRRSQESEEGDRDRRRRHRGLEREESPAPGGGNQAQGQRSRWEKGRGRQEGLSGGENGGNGRYEEERRDISLQERERDGRGARLRKSTEARAQAGAGREREALVPGGEPSRGQEERYEWGKPAISPLNGDASSRGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRHGVADLKVEHPSCSKQHAVLQFRQKHEGAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHESLVGSS 382
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|1183368561|gb|ORX94608.1| (SMAD/FHA domain-containing protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 185.267 bits (469), Expect = 7.781e-53 Identity = 89/154 (57.79%), Postives = 111/154 (72.08%), Query Frame = 0
Query: 233 PNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFRQKHEGAEV-------KPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHESL 378
PNFGL+G LA + N Y GVV+K++EP +AR P++ WRLYVFK E D LH+HRQSAYLVGR +AD+ V+HPSCSKQHA QFRQ E EV KPY++DLE+ N T +NGE +PP RY EL+ D I+FG S+REYVL+HE+L
Sbjct: 109 PNFGLSGKLAAET---NTYNGVVVKYNEPPEARNPTKKWRLYVFKGKEQIDLLHIHRQSAYLVGRDRKIADIPVDHPSCSKQHAAFQFRQVVEKNEVGEIKRTVKPYIIDLEATNGTFVNGERIPPTRYYELKVSDVIKFGSSTREYVLLHENL 259
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|1021808403|gb|KZP00681.1| (SMAD/FHA domain-containing protein [Calocera viscosa TUFC12733]) HSP 1 Score: 179.489 bits (454), Expect = 5.872e-50 Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 0
Query: 203 PAISPLNGDASSRGEDGGKGEEKAPTL-VAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFRQK-------HEGAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHESL 378
PA P G + SR G E AP AKPNF +GALA T N GVVLK++EP +AR P+R WRLYVFK E + LH+ +QSAYLVGR VAD+ +EHPSCSKQHAV+Q+RQ + VKP+++DL+S N T +N EE+P +R+ EL+ D I+FG S+REYVL+HE +
Sbjct: 126 PAAFPTFGPSGSRSPAAGSRELSAPQEDKAKPNFNQSGALAAATNTVN---GVVLKYNEPPEARKPTRNWRLYVFKGDEQVELLHISKQSAYLVGRDRVVADIPIEHPSCSKQHAVIQYRQVTSRNEFGDTSSSVKPFIIDLDSTNGTFVNDEEIPKSRFYELKESDVIKFGQSTREYVLLHEDV 307
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|1001610382|gb|KXS14160.1| (SMAD/FHA domain-containing protein [Gonapodya prolifera JEL478]) HSP 1 Score: 177.563 bits (449), Expect = 1.577e-49 Identity = 93/177 (52.54%), Postives = 116/177 (65.54%), Query Frame = 0
Query: 211 DASSRGEDGGKGEEKAPTLVA------KPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFR----QKHEGAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHE 376
DA + D G+G E T KPNF L+G L + N YKGVVLK+SEP +AR WRLYVFK G+ D H+HRQSAYL+GR VAD+ V+HPSCSKQHAV+Q+R + EG VKPY++DL+S N T +NG +P +RYVELR D ++FG SSREYV+M E
Sbjct: 106 DAKAEVPDVGEGAEGVDTAEGSEQPKEKPNFALSGKLNAEQ---NTYKGVVLKYSEPPEARKSGVKWRLYVFKDGKETDIFHIHRQSAYLLGRDRLVADIPVDHPSCSKQHAVVQYRLVEGKDGEGKAVKPYIIDLDSANGTHVNGSRIPSSRYVELRQGDVVKFGFSSREYVVMRE 279
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|530617353|ref|XP_005298412.1| (PREDICTED: smad nuclear-interacting protein 1 [Chrysemys picta bellii]) HSP 1 Score: 179.874 bits (455), Expect = 2.005e-49 Identity = 85/170 (50.00%), Postives = 119/170 (70.00%), Query Frame = 0
Query: 216 GEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFRQKHE-------GAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHES 377
G+ G+ ++K PT KP+F L+GAL +D+ N ++GVV+K+SEP +AR+P + WRLY FK E+ +++HRQSAYL+GRH +AD+ ++HPSCSKQHAV Q+R G VKPY++DL S N T LN + + P RY EL+ +D ++FG SSREYVL+HES
Sbjct: 183 GKPDGENKDKDPTNKEKPSFELSGALLEDS---NTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNQRIEPQRYYELKEKDVLKFGFSSREYVLLHES 349
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|511832320|ref|XP_004740815.1| (PREDICTED: smad nuclear-interacting protein 1 [Mustela putorius furo]) HSP 1 Score: 179.874 bits (455), Expect = 3.795e-49 Identity = 114/309 (36.89%), Postives = 162/309 (52.43%), Query Frame = 0
Query: 77 GQSRRRRRSQESEEGDRDRRRRHRGLEREESPAPGGGNQAQGQRSRWEKGRGRQEGLSGGENGGNGRYEEERRDISLQERERDGRGARLRKSTEARAQAGAGREREALVPGGEPSRGQEERYEWGKPAISPLNGDASSRGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFRQKHE-------GAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHES 377
GQ RR R+ DRDR R H R + PG G QAQG+ + + +++ Q+ ER+ AR R++ + + +G E + VP +P GG ++K P KP+F L+GAL +D N ++GVV+K+SEP +AR+P + WRLY FK E+ +++HRQSAYL+GRH +AD+ ++HPSCSKQHAV Q+R G VKPY++DL S N T LN + + P RY EL+ +D ++FG SSREYVL+HES
Sbjct: 130 GQEHRRARN-----SDRDRHRGHSHQRRSSNERPGSG-QAQGR-------------------------DRDVQNLQAQDIEREFYNARRRENRQKNEVSASGNESQGSVP---------------RP---------------GGNNKDKEPPAKEKPSFELSGALLEDT---NTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHES 374
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|1044427671|ref|XP_017365248.1| (PREDICTED: smad nuclear-interacting protein 1 [Cebus capucinus imitator]) HSP 1 Score: 179.489 bits (454), Expect = 5.772e-49 Identity = 113/294 (38.44%), Postives = 154/294 (52.38%), Query Frame = 0
Query: 92 DRDRRRRHRGLEREESPAPGGGNQAQGQRSRWEKGRGRQEGLSGGENGGNGRYEEERRDISLQERERDGRGARLRKSTEARAQAGAGREREALVPGGEPSRGQEERYEWGKPAISPLNGDASSRGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFRQKHE-------GAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHES 377
DRDR R H R + PG G QGQ GR R + +++ QE ER+ AR R+ + G+G E + LVP GG +EK + KP+F L+GAL +D N ++GVV+K+SEP +AR+P + WRLY FK E+ +++HRQSAYL+GRH +AD+ ++HPSCSKQHAV Q+R G VKPY++DL S N T LN + + P RY EL+ +D ++FG SSREYVL+HES
Sbjct: 139 DRDRHRGHSHQRRTSNERPGSG---QGQ------GRDR-----------------DTQNLQAQEDEREFYNARRREHRQRNDVGGSGSESQELVP------------------------------RPGGNNKEKEVPVKEKPSFELSGALLEDT---NTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHES 373
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|1168893434|ref|XP_020489156.1| (smad nuclear-interacting protein 1 [Labrus bergylta]) HSP 1 Score: 179.489 bits (454), Expect = 6.021e-49 Identity = 85/170 (50.00%), Postives = 113/170 (66.47%), Query Frame = 0
Query: 215 RGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFR-------QKHEGAEVKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHE 376
R E+G AP V KPNFGL+GAL +D N ++GVV+K++EP +AR+P R WRLY FK E +++HRQSAYL+GR +AD+ ++HPSCSKQHAV Q+R G V+PY++DL S N T LN + + RY EL+ +D I+FG SSREYVL+HE
Sbjct: 208 RSEEGDDDSNPAPAEVEKPNFGLSGALTEDT---NTFRGVVIKYNEPPEARIPKRRWRLYPFKNDEPLPVMYIHRQSAYLLGRQRKIADIPIDHPSCSKQHAVFQYRLVEFTRADGTSGRRVRPYIIDLGSGNGTYLNNQRIESQRYYELKEKDVIKFGFSSREYVLLHE 374
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|548461519|ref|XP_005678741.1| (PREDICTED: smad nuclear-interacting protein 1 [Capra hircus]) HSP 1 Score: 178.333 bits (451), Expect = 1.379e-48 Identity = 86/175 (49.14%), Postives = 121/175 (69.14%), Query Frame = 0
Query: 211 DASSRGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFR-QKHEGAE------VKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHES 377
DA R GG +++ + KP+F L+GAL +D N ++GVV+K+SEP +AR+P + WRLY FK E+ +++HRQSAYL+GRH +AD+ ++HPSCSKQHAV Q+R +H A+ VKPY++DL S N T LN + + P RY EL+ +D ++FG SSREYVL+HES
Sbjct: 205 DAQPRPGPGGNNKDREVPVKEKPSFELSGALLEDT---NTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEHTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHES 376
BLAST of EWM27474.1 vs. NCBI_GenBank
Match: gi|589934678|ref|XP_006980119.1| (PREDICTED: smad nuclear-interacting protein 1 [Peromyscus maniculatus bairdii]) HSP 1 Score: 178.333 bits (451), Expect = 1.436e-48 Identity = 132/355 (37.18%), Postives = 187/355 (52.68%), Query Frame = 0
Query: 33 SRSRSRSRS-LHRQRKRSGSRSRYGTSSPLSSSRYHSPHRGGDQKGQSRRRRRSQESEEGDRDRRRRHRGLEREESPAPGGGNQAQGQRSRWEKGRGRQEGLSGGENGGNGRYEEERRDISLQERERDGRGARLRKSTEARAQ-AGAGREREALVPGGEPSRGQEERYEWGKPAISPLNGDASSRGEDGGKGEEKAPTLVAKPNFGLTGALAQDAQTGNVYKGVVLKWSEPDDARLPSRGWRLYVFKQGELKDTLHLHRQSAYLVGRH-GVADLKVEHPSCSKQHAVLQFR-QKHEGAE------VKPYLMDLESVNKTRLNGEEVPPARYVELRAQDTIQFGLSSREYVLMHES 377
SR+R SRS ++ K SG RS+ + S Y + +++ RR R ++ E +RR R ERE G Q + R G+GR + + +++ QE ERD AR R E R Q GAG E L+P +PA G +G+E + KP+F L+GAL +D N ++GVV+K+SEP +AR+P + WRLY FK E+ +++HRQSAYL+GRH +AD+ ++HPSCSKQHAV Q+R +H A+ VKPY++DL S N T LN + + P RY EL+ +D ++FG SSREYVL+HES
Sbjct: 64 SRARGASRSPAKKKNKSSGRRSKSPRTKRSRSPHYSTVKVKQEREDHPRRGREDRQHREPSEQEQRRARNSERERDRHRGHSRQKRSSDERPVSGQGR---------------DRDSQNLQAQEEERDFHNARRR---EHRQQNEGAGGEAHELIP---------------RPA--------------GNRGKEVP--VKEKPSFELSGALLEDT---NTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEHTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHES 366 The following BLAST results are available for this feature:
BLAST of EWM27474.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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