EWM27486.1, cds3187 (CDS) Nannochloropsis gaditana

Overview
NameEWM27486.1
Unique Namecds3187
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:972965..973936 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27486.1
Productnitroreductase-like protein
Orig transcript idgnl|cribi|Naga_100855g3.1136.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:972965..973936 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR000415Nitroreductase-like
IPR029479Nitroreductase
Homology
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|585109749|gb|EWM27486.1| (nitroreductase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 659.062 bits (1699), Expect = 0.000e+0
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query:    1 MAMRPILIAFLLLVLLPMQKAFLVRAVPAIPVYQPPPPCYMAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGVA 323
            MAMRPILIAFLLLVLLPMQKAFLVRAVPAIPVYQPPPPCYMAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGVA
Sbjct:    1 MAMRPILIAFLLLVLLPMQKAFLVRAVPAIPVYQPPPPCYMAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGVA 323          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|553183422|ref|XP_005853895.1| (NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295166|gb|EKU22465.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 0
Query:   41 MAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 322
            MAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVV LLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEE YGRPWKGV
Sbjct:    1 MAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVVLLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEVYGRPWKGV 282          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|298709419|emb|CBJ49232.1| (nitroreductase-like protein [Ectocarpus siliculosus])

HSP 1 Score: 187.193 bits (474), Expect = 1.677e-53
Identity = 108/262 (41.22%), Postives = 154/262 (58.78%), Query Frame = 0
Query:   62 AGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWF-KAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 322
            A  F ++  +R S  H+   +PV    L ++L L  RAPS FNIQP++ +V+     + K+  +AMLG N  RV  A  TVVFA+D+ S + + ++  +L + G +PEGF+KK+P + ++FSTG+   LLR  L   K+++  VV    K +P +   E WA K+TMLA    +LAA+SHGL TCPMEGFD RRLR  L +P RY +P+VVS+GY +    E                  +LRFP EEV+  E +G P +GV
Sbjct:   72 AEAFERVTLARRSTKHFDRRRPVPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKHKLS-RAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAKEG-WPEGFIKKVPLYLSVFSTGHN-RLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKSTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIK----------------TLRFPPEEVLHREEFGTPLEGV 314          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|585110611|gb|EWM28266.1| (nitroreductase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 157.532 bits (397), Expect = 5.205e-42
Identity = 96/261 (36.78%), Postives = 146/261 (55.94%), Query Frame = 0
Query:   65 FSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPF-FANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLP-TRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGVA 323
            F + V +R S   + + + +   TL  +L LT R P+SFN+QP+ + +++    + K+    MLG N  RV  APVT VFAAD++  +L+P+V +L R+    PE +L  +PF  A L   G+         +  K +    +   + +P +   E W+ KNT +AA  +MLA S HGL TCPMEGFD RR+ H L +P +RY +P+VVS G+A      + +  KE     +K+ P   RFP E VV ++ YG  +KG++
Sbjct:   76 FKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLA-ACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGH-------LAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKE-----AKRSP---RFPPEAVVFKDQYGHAYKGIS 320          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|299116515|emb|CBN76229.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 154.451 bits (389), Expect = 5.603e-41
Identity = 99/259 (38.22%), Postives = 142/259 (54.83%), Query Frame = 0
Query:   65 FSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 322
            F  +V SR +   + S + V    L E++ LTQ APSSFNIQP+ +VV+RD   R+++   AMLG N  +V  APVT VF AD+E S+ + ++V L R+AG  PE  + K     NLFS  G   + +R            +    +  P +   E W+ KNT LA  T++L+ ++HGL T PMEGFDARR+R  L +P RY +P++V  GY   P     +G   G  V+ +      R+P +EVV +  +G    GV
Sbjct:   71 FRDVVTSRTAAISF-SDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERL-STAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAG-MPEAEITKFCLAVNLFSGEGVVGNAVR-------NAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGY---PAPSKPEGQGGGGGVARR-----WRYPPQEVVFDGTFGVGMTGV 311          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|873236239|emb|CEL99380.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 154.066 bits (388), Expect = 2.512e-40
Identity = 94/270 (34.81%), Postives = 146/270 (54.07%), Query Frame = 0
Query:   67 QIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQ-------------AGTFPEG------FLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGR 317
             ++ SR  N      K V +  L +L+   QRAPS FN+QP+  +++R+ ++R+++    +   N ++++ APV  VF AD+ES R MP++VAL+++             +   P+        L++IPF+ +LF+      L+R+  +  + V   V+  F+ +P     ETWA KNTMLA  T+ML AS++GL T PMEGFD  RLR +L LP R+ +P+VV+ GY A               +S   P  S R PM+E V  + Y R
Sbjct:   99 DVIFSR-RNCRTFLPKEVPLEVLTDLMTAAQRAPSGFNMQPWVCILVREASVRERLAATMLGEKNRSKIKEAPVVAVFCADLESQRQMPRIVALIKKDRERRLAYRATQASSKSPQKPPAKSKSLQRIPFYVSLFAGALRGWLIRYLWFLIRYVIFAVLRVFQPLPVPSMAETWAYKNTMLAVQTYMLLASAYGLGTAPMEGFDMVRLRRVLMLPDRFSVPLVVATGYPA------------DAPISRTYPLLSGRLPMDEQVFSDFYDR 355          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|970629523|gb|KUF76758.1| (NADH dehydrogenase [Phytophthora nicotianae] >gi|970657950|gb|KUF95774.1| hypothetical protein AM588_10006839 [Phytophthora nicotianae])

HSP 1 Score: 150.599 bits (379), Expect = 2.634e-40
Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 0
Query:   83 PVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYA 276
            PV   TL E+LRLTQRAP+ FN+QP+  V++R+   R+K+  +AM+ +N  +V+ APV  VFAAD+E S+ +P++  L+   G  P  F+  +P    LFS  G   S LR  +          V      P     E WA K T  AA TF+ AA +HGL TCPMEGFD  R+R+ L +P RY +PVV++LG+A
Sbjct:   18 PVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLA-EAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGA-PADFVANMPHVVRLFSGEGVVASTLRAAIATA-------VSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHA 203          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|568010707|gb|ETL84890.1| (hypothetical protein L917_15410, partial [Phytophthora parasitica])

HSP 1 Score: 150.599 bits (379), Expect = 6.736e-40
Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 0
Query:   83 PVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYA 276
            PV   TL E+LRLTQRAP+ FN+QP+  V++R+   R+K+  +AM+ +N  +V+ APV  VFAAD+E S+ +P++  L+   G  P  F+  +P    LFS  G   S LR  +          V      P     E WA K T  AA TF+ AA +HGL TCPMEGFD  R+R+ L +P RY +PVV++LG+A
Sbjct:   59 PVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLA-EAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGA-PADFVANMPHVVRLFSGEGVVASTLRAAIATA-------VSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHA 244          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|570973268|gb|ETP35937.1| (hypothetical protein F442_15999 [Phytophthora parasitica P10297])

HSP 1 Score: 150.214 bits (378), Expect = 6.850e-40
Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 0
Query:   83 PVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYA 276
            PV   TL E+LRLTQRAP+ FN+QP+  V++R+   R+K+  +AM+ +N  +V+ APV  VFAAD+E S+ +P++  L+   G  P  F+  +P    LFS  G   S LR  +          V      P     E WA K T  AA TF+ AA +HGL TCPMEGFD  R+R+ L +P RY +PVV++LG+A
Sbjct:   43 PVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLA-EAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGA-PADFVANMPHVVRLFSGEGVVASTLRAAIATA-------VSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHA 228          
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|301108053|ref|XP_002903108.1| (nitroreductase family, putative [Phytophthora infestans T30-4] >gi|262097480|gb|EEY55532.1| nitroreductase family, putative [Phytophthora infestans T30-4])

HSP 1 Score: 147.517 bits (371), Expect = 7.825e-39
Identity = 85/209 (40.67%), Postives = 122/209 (58.37%), Query Frame = 0
Query:   69 VHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYA 276
            +  R++   + S  PV   TL E+L+LT RAP+ FN+QP+  V++R+P  R+K+  +AM+ +N  +V+ APV  VFAAD+E S+ +P++  L    G   + F+  +P F  LFS  G   S LR  +          V     VP     E WA K T  AA TF+ AA +H L TCPMEGFD  R+R+ L +P RY +PVV++LG+A
Sbjct:   30 IEERYACKAFLS-TPVSDETLKEILKLTLRAPTGFNVQPYACVLVREPKDREKLA-EAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQQLAHDNGASAD-FVANLPHFVRLFSGEGVVASGLRAAIATA-------VSPLLPVPSNVSTEAWAFKQTAFAAATFLYAAQAHDLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHA 228          
The following BLAST results are available for this feature:
BLAST of EWM27486.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109749|gb|EWM27486.1|0.000e+0100.00nitroreductase-like protein [Nannochloropsis gadit... [more]
gi|553183422|ref|XP_005853895.1|0.000e+099.29NADH dehydrogenase [Nannochloropsis gaditana CCMP5... [more]
gi|298709419|emb|CBJ49232.1|1.677e-5341.22nitroreductase-like protein [Ectocarpus siliculosu... [more]
gi|585110611|gb|EWM28266.1|5.205e-4236.78nitroreductase-like protein [Nannochloropsis gadit... [more]
gi|299116515|emb|CBN76229.1|5.603e-4138.22conserved unknown protein [Ectocarpus siliculosus][more]
gi|873236239|emb|CEL99380.1|2.512e-4034.81unnamed protein product [Vitrella brassicaformis C... [more]
gi|970629523|gb|KUF76758.1|2.634e-4043.08NADH dehydrogenase [Phytophthora nicotianae] >gi|9... [more]
gi|568010707|gb|ETL84890.1|6.736e-4043.08hypothetical protein L917_15410, partial [Phytopht... [more]
gi|570973268|gb|ETP35937.1|6.850e-4043.08hypothetical protein F442_15999 [Phytophthora para... [more]
gi|301108053|ref|XP_002903108.1|7.825e-3940.67nitroreductase family, putative [Phytophthora infe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3195rna3195Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications