EWM27486.1, cds3187 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|585109749|gb|EWM27486.1| (nitroreductase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 659.062 bits (1699), Expect = 0.000e+0 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query: 1 MAMRPILIAFLLLVLLPMQKAFLVRAVPAIPVYQPPPPCYMAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGVA 323
MAMRPILIAFLLLVLLPMQKAFLVRAVPAIPVYQPPPPCYMAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGVA
Sbjct: 1 MAMRPILIAFLLLVLLPMQKAFLVRAVPAIPVYQPPPPCYMAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGVA 323
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|553183422|ref|XP_005853895.1| (NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295166|gb|EKU22465.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 0
Query: 41 MAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 322
MAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVV LLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEE YGRPWKGV
Sbjct: 1 MAVHGAGDAISAPSGASVSLLAGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVVLLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEVYGRPWKGV 282
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|298709419|emb|CBJ49232.1| (nitroreductase-like protein [Ectocarpus siliculosus]) HSP 1 Score: 187.193 bits (474), Expect = 1.677e-53 Identity = 108/262 (41.22%), Postives = 154/262 (58.78%), Query Frame = 0
Query: 62 AGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWF-KAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 322
A F ++ +R S H+ +PV L ++L L RAPS FNIQP++ +V+ + K+ +AMLG N RV A TVVFA+D+ S + + ++ +L + G +PEGF+KK+P + ++FSTG+ LLR L K+++ VV K +P + E WA K+TMLA +LAA+SHGL TCPMEGFD RRLR L +P RY +P+VVS+GY + E +LRFP EEV+ E +G P +GV
Sbjct: 72 AEAFERVTLARRSTKHFDRRRPVPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKHKLS-RAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAKEG-WPEGFIKKVPLYLSVFSTGHN-RLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKSTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIK----------------TLRFPPEEVLHREEFGTPLEGV 314
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|585110611|gb|EWM28266.1| (nitroreductase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 157.532 bits (397), Expect = 5.205e-42 Identity = 96/261 (36.78%), Postives = 146/261 (55.94%), Query Frame = 0
Query: 65 FSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPF-FANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLP-TRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGVA 323
F + V +R S + + + + TL +L LT R P+SFN+QP+ + +++ + K+ MLG N RV APVT VFAAD++ +L+P+V +L R+ PE +L +PF A L G+ + K + + + +P + E W+ KNT +AA +MLA S HGL TCPMEGFD RR+ H L +P +RY +P+VVS G+A + + KE +K+ P RFP E VV ++ YG +KG++
Sbjct: 76 FKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDTKQKLA-ACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVAFLAGKGH-------LAHAFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLACSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNKE-----AKRSP---RFPPEAVVFKDQYGHAYKGIS 320
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|299116515|emb|CBN76229.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 154.451 bits (389), Expect = 5.603e-41 Identity = 99/259 (38.22%), Postives = 142/259 (54.83%), Query Frame = 0
Query: 65 FSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 322
F +V SR + + S + V L E++ LTQ APSSFNIQP+ +VV+RD R+++ AMLG N +V APVT VF AD+E S+ + ++V L R+AG PE + K NLFS G + +R + + P + E W+ KNT LA T++L+ ++HGL T PMEGFDARR+R L +P RY +P++V GY P +G G V+ + R+P +EVV + +G GV
Sbjct: 71 FRDVVTSRTAAISF-SDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERL-STAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAG-MPEAEITKFCLAVNLFSGEGVVGNAVR-------NAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGY---PAPSKPEGQGGGGGVARR-----WRYPPQEVVFDGTFGVGMTGV 311
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|873236239|emb|CEL99380.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 154.066 bits (388), Expect = 2.512e-40 Identity = 94/270 (34.81%), Postives = 146/270 (54.07%), Query Frame = 0
Query: 67 QIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQ-------------AGTFPEG------FLKKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGR 317
++ SR N K V + L +L+ QRAPS FN+QP+ +++R+ ++R+++ + N ++++ APV VF AD+ES R MP++VAL+++ + P+ L++IPF+ +LF+ L+R+ + + V V+ F+ +P ETWA KNTMLA T+ML AS++GL T PMEGFD RLR +L LP R+ +P+VV+ GY A +S P S R PM+E V + Y R
Sbjct: 99 DVIFSR-RNCRTFLPKEVPLEVLTDLMTAAQRAPSGFNMQPWVCILVREASVRERLAATMLGEKNRSKIKEAPVVAVFCADLESQRQMPRIVALIKKDRERRLAYRATQASSKSPQKPPAKSKSLQRIPFYVSLFAGALRGWLIRYLWFLIRYVIFAVLRVFQPLPVPSMAETWAYKNTMLAVQTYMLLASAYGLGTAPMEGFDMVRLRRVLMLPDRFSVPLVVATGYPA------------DAPISRTYPLLSGRLPMDEQVFSDFYDR 355
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|970629523|gb|KUF76758.1| (NADH dehydrogenase [Phytophthora nicotianae] >gi|970657950|gb|KUF95774.1| hypothetical protein AM588_10006839 [Phytophthora nicotianae]) HSP 1 Score: 150.599 bits (379), Expect = 2.634e-40 Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 0
Query: 83 PVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYA 276
PV TL E+LRLTQRAP+ FN+QP+ V++R+ R+K+ +AM+ +N +V+ APV VFAAD+E S+ +P++ L+ G P F+ +P LFS G S LR + V P E WA K T AA TF+ AA +HGL TCPMEGFD R+R+ L +P RY +PVV++LG+A
Sbjct: 18 PVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLA-EAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGA-PADFVANMPHVVRLFSGEGVVASTLRAAIATA-------VSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHA 203
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|568010707|gb|ETL84890.1| (hypothetical protein L917_15410, partial [Phytophthora parasitica]) HSP 1 Score: 150.599 bits (379), Expect = 6.736e-40 Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 0
Query: 83 PVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYA 276
PV TL E+LRLTQRAP+ FN+QP+ V++R+ R+K+ +AM+ +N +V+ APV VFAAD+E S+ +P++ L+ G P F+ +P LFS G S LR + V P E WA K T AA TF+ AA +HGL TCPMEGFD R+R+ L +P RY +PVV++LG+A
Sbjct: 59 PVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLA-EAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGA-PADFVANMPHVVRLFSGEGVVASTLRAAIATA-------VSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHA 244
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|570973268|gb|ETP35937.1| (hypothetical protein F442_15999 [Phytophthora parasitica P10297]) HSP 1 Score: 150.214 bits (378), Expect = 6.850e-40 Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 0
Query: 83 PVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYA 276
PV TL E+LRLTQRAP+ FN+QP+ V++R+ R+K+ +AM+ +N +V+ APV VFAAD+E S+ +P++ L+ G P F+ +P LFS G S LR + V P E WA K T AA TF+ AA +HGL TCPMEGFD R+R+ L +P RY +PVV++LG+A
Sbjct: 43 PVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLA-EAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGA-PADFVANMPHVVRLFSGEGVVASTLRAAIATA-------VSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHA 228
BLAST of EWM27486.1 vs. NCBI_GenBank
Match: gi|301108053|ref|XP_002903108.1| (nitroreductase family, putative [Phytophthora infestans T30-4] >gi|262097480|gb|EEY55532.1| nitroreductase family, putative [Phytophthora infestans T30-4]) HSP 1 Score: 147.517 bits (371), Expect = 7.825e-39 Identity = 85/209 (40.67%), Postives = 122/209 (58.37%), Query Frame = 0
Query: 69 VHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKVGHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLKKIPFFANLFS-TGYPFSLLRWCLYWGKRVAMHVVGWFKAVPRLERPETWAVKNTMLAAMTFMLAASSHGLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYA 276
+ R++ + S PV TL E+L+LT RAP+ FN+QP+ V++R+P R+K+ +AM+ +N +V+ APV VFAAD+E S+ +P++ L G + F+ +P F LFS G S LR + V VP E WA K T AA TF+ AA +H L TCPMEGFD R+R+ L +P RY +PVV++LG+A
Sbjct: 30 IEERYACKAFLS-TPVSDETLKEILKLTLRAPTGFNVQPYACVLVREPKDREKLA-EAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQQLAHDNGASAD-FVANLPHFVRLFSGEGVVASGLRAAIATA-------VSPLLPVPSNVSTEAWAFKQTAFAAATFLYAAQAHDLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHA 228 The following BLAST results are available for this feature:
BLAST of EWM27486.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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