EWM27495.1, cds3175 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|585109759|gb|EWM27495.1| (protein rer1a [Nannochloropsis gaditana]) HSP 1 Score: 652.514 bits (1682), Expect = 0.000e+0 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0 Query: 1 MEAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRATPRQAARVRRGLLPISLPACQRKDLCRLSRLRPAISVREIALKGRIQRGHGGAPRDGWKTLCRVHDVEKMGKVAHAPQGWPPRDKARGVKQREGEKGRRGDGRAPGLQLSKNHTTKCAAKGHLNPTLVHTAPKMC 314 MEAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRATPRQAARVRRGLLPISLPACQRKDLCRLSRLRPAISVREIALKGRIQRGHGGAPRDGWKTLCRVHDVEKMGKVAHAPQGWPPRDKARGVKQREGEKGRRGDGRAPGLQLSKNHTTKCAAKGHLNPTLVHTAPKMC Sbjct: 1 MEAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRATPRQAARVRRGLLPISLPACQRKDLCRLSRLRPAISVREIALKGRIQRGHGGAPRDGWKTLCRVHDVEKMGKVAHAPQGWPPRDKARGVKQREGEKGRRGDGRAPGLQLSKNHTTKCAAKGHLNPTLVHTAPKMC 314
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|553179382|ref|XP_005852692.1| (protein rer1a [Nannochloropsis gaditana CCMP526] >gi|422295841|gb|EKU23140.1| protein rer1a [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 380.563 bits (976), Expect = 1.742e-131 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0 Query: 1 MEAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRATPR 182 MEAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRATPR Sbjct: 1 MEAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRATPR 182
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|698792056|ref|XP_009829060.1| (hypothetical protein H257_05786 [Aphanomyces astaci] >gi|574115717|gb|ETV81202.1| hypothetical protein H257_05786 [Aphanomyces astaci]) HSP 1 Score: 239.195 bits (609), Expect = 1.352e-75 Identity = 109/174 (62.64%), Postives = 139/174 (79.89%), Query Frame = 0 Query: 6 ESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRA 179 E + +E+ S+ RKWQH+LDQST++V RW+ A +LT Y VRV+Y+N + I+TYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+ SEE+RPF+RR+PEFKFWY KAT++A +TFFE F+VPV+WPILL+YF+ LF LTMKRQI+HM KH YVPWS+ K Y G G K + Sbjct: 17 EPAFLERVFASFGRKWQHVLDQSTIYVYGRWIASAVLLTSYIVRVYYLNAFHIITYGLGIYLLNLFIGFLSPQIDPETEGPVLPSTNSEEFRPFSRRVPEFKFWYTSTKATFMATLLTFFEVFNVPVFWPILLMYFILLFTLTMKRQIKHMWKHNYVPWSSGKQVYKGKGGKDS 190
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|1173959947|gb|OQS06120.1| (hypothetical protein THRCLA_01817 [Thraustotheca clavata]) HSP 1 Score: 234.958 bits (598), Expect = 3.690e-74 Identity = 106/174 (60.92%), Postives = 137/174 (78.74%), Query Frame = 0 Query: 6 ESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRA 179 E + +E+ S RKWQH+LDQST+HV RWV+ +L++Y +RV IN + I+TYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+ +SEE+RPF+RR+PEFKFWY KAT+ A MTFFE F++PV+WPILL+YF+ LF LTMKRQI+HM KH YVPW++ K Y G +K + Sbjct: 11 EPAFLERVASSVGRKWQHVLDQSTIHVTGRWVLSLVLLSIYLIRVLTINAFHIITYGLGIYLLNLFIGFLSPQIDPETEGPVLPSSKSEEFRPFSRRVPEFKFWYATTKATFYALCMTFFEIFNIPVFWPILLMYFIVLFTLTMKRQIKHMWKHNYVPWNHGKQVYKGKPQKDS 184
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|813118794|ref|XP_012196064.1| (hypothetical protein SPRG_02123 [Saprolegnia parasitica CBS 223.65] >gi|641539505|gb|KDO33314.1| hypothetical protein SPRG_02123 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 234.958 bits (598), Expect = 5.361e-74 Identity = 110/184 (59.78%), Postives = 138/184 (75.00%), Query Frame = 0 Query: 2 EAGGES------SVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRA 179 AGG+S +E+ S RKWQH+LDQST+HV RWV A +L +Y RV IN + I+TYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+ +SEE+RPF+RR+PEFKFWY KAT+ A MTFFE F++PV+WPILL+YF+ LF LTMKRQI+HM KH YVPW++ K Y G +K + Sbjct: 7 SAGGDSRSLTEPVFLERVAASVGRKWQHVLDQSTIHVTGRWVFSAVLLVVYLARVLTINSFHIITYGLGIYLLNLFIGFLSPQIDPETEGPVLPSSKSEEFRPFSRRVPEFKFWYATTKATFYALLMTFFEIFNIPVFWPILLMYFIVLFTLTMKRQIKHMWKHNYVPWNHGKQVYKGKPQKDS 190
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|669159136|ref|XP_008615130.1| (hypothetical protein SDRG_10892 [Saprolegnia diclina VS20] >gi|530733047|gb|EQC31289.1| hypothetical protein SDRG_10892 [Saprolegnia diclina VS20]) HSP 1 Score: 232.261 bits (591), Expect = 5.630e-73 Identity = 108/184 (58.70%), Postives = 138/184 (75.00%), Query Frame = 0 Query: 2 EAGGES------SVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRA 179 AGG+S +E+ S RKWQH+LDQST+HV RWV A +L +Y RV +N + I+TYGLGIYLLN FIGFLSPQ+DPE++GP+LP+ +SEE+RPF+RR+PEFKFWY KAT+ A MTFFE F++PV+WPILL+YF+ LF LTMKRQI+HM KH YVPW++ K Y G +K + Sbjct: 8 SAGGDSRSLTEPVFLERVAASVGRKWQHVLDQSTIHVTGRWVFSAVLLVVYLARVLTLNSFHIITYGLGIYLLNLFIGFLSPQIDPETDGPVLPSSKSEEFRPFSRRVPEFKFWYATTKATFYALFMTFFEIFNIPVFWPILLMYFIVLFTLTMKRQIKHMWKHNYVPWNHGKQVYKGKPQKDS 191
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|1173943779|gb|OQR92589.1| (protein RER1A [Achlya hypogyna]) HSP 1 Score: 230.72 bits (587), Expect = 3.598e-72 Identity = 103/161 (63.98%), Postives = 129/161 (80.12%), Query Frame = 0 Query: 19 RKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRA 179 RKWQH+LDQST+HV RW+ A ++ +Y RV IN + IVTYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+ +SEE+RPF+RR+PEFKFWY KAT+ A MTFFE F++PV+WPILL+YF+ LF LTMKRQI+HM KH YVPW++ K Y G +K + Sbjct: 46 RKWQHLLDQSTIHVTGRWIFSAVLIFVYLARVLSINSFHIVTYGLGIYLLNLFIGFLSPQIDPETEGPVLPSAKSEEFRPFSRRVPEFKFWYATTKATFYALLMTFFEIFNIPVFWPILLMYFIVLFTLTMKRQIKHMWKHNYVPWNHGKQVYKGKAQKDS 206
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|673043775|ref|XP_008875848.1| (hypothetical protein H310_11074 [Aphanomyces invadans] >gi|574468637|gb|ETV95655.1| hypothetical protein H310_11074 [Aphanomyces invadans]) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-71 Identity = 104/161 (64.60%), Postives = 131/161 (81.37%), Query Frame = 0 Query: 6 ESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSN 166 E + +E+ S RKWQH+LDQST++V RW A +LT+Y +RV+Y+N + I+TYGLGIYLLN FIGFLSPQ+DPE+EGP+LP+ SEE+RPF+RR+PEFKFWY KAT+IA +TFFE F+VPV+WPILL+YF+ LF LTMKRQI+HM KH YVPWS Sbjct: 17 EPAFLERVFASVGRKWQHLLDQSTIYVYGRWAASALLLTVYILRVYYLNAFHIITYGLGIYLLNLFIGFLSPQIDPETEGPVLPSTSSEEFRPFSRRVPEFKFWYSATKATFIATLLTFFEVFNVPVFWPILLMYFILLFTLTMKRQIKHMWKHNYVPWST 177
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|922868291|gb|KOO34716.1| (rer1a protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 223.787 bits (569), Expect = 1.023e-69 Identity = 104/184 (56.52%), Postives = 135/184 (73.37%), Query Frame = 0 Query: 2 EAGGESSVVEQFVVSWQRKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRATPRQAA 185 E E V +F RKWQH++DQS H RW++ ++ +Y +RV++++GW+I+TYGLGIY+LN IGFLSPQ+DPE+EGP LPT +E+RPF RRLPEFKFWY KA +AF MTFF F++PV+WPILLLYF++LF LTMKRQI+HM+K+RYVP+S K RY G + A PR A Sbjct: 4 EVEMEEGQVGKFQSMVARKWQHLMDQSAPHTVPRWILTLLIVIIYCLRVYFLHGWYIITYGLGIYVLNLLIGFLSPQVDPEAEGPTLPTTRDDEFRPFIRRLPEFKFWYSLTKAFCVAFVMTFFSVFNIPVFWPILLLYFIALFALTMKRQIKHMVKYRYVPFSLGKTRYQGRDDD-APPRGRA 186
BLAST of EWM27495.1 vs. NCBI_GenBank
Match: gi|168011853|ref|XP_001758617.1| (predicted protein [Physcomitrella patens] >gi|162690227|gb|EDQ76595.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 224.172 bits (570), Expect = 1.082e-69 Identity = 106/186 (56.99%), Postives = 139/186 (74.73%), Query Frame = 0 Query: 4 GGESSVVEQFVVSWQ----RKWQHILDQSTVHVGLRWVIFAAMLTLYAVRVFYINGWFIVTYGLGIYLLNNFIGFLSPQMDPESEGPLLPTQESEEYRPFARRLPEFKFWYQCAKATWIAFTMTFFEFFDVPVYWPILLLYFVSLFILTMKRQIRHMIKHRYVPWSNSKARYAGAGEKRATPRQAA 185 G E ++ W+ R++Q+ LD+ST H G+RWV + +Y +R +Y+ G++IVTYGLGIYLLN IGFLSPQ+DPESEGP LPT+ S+E++PF RRLPEFKFWY KA +AFT+TFF FDVPV+WPILLLY++ LF+LTMKRQIRHMIK+RYVP+S K RY G ++ +P +A+ Sbjct: 6 GEEGDASSNALLKWRNQMGRRFQYYLDKSTPHAGMRWVATLVVAAIYCLRAYYVKGFYIVTYGLGIYLLNLLIGFLSPQVDPESEGPALPTKGSDEFKPFIRRLPEFKFWYAFTKALIVAFTLTFFSIFDVPVFWPILLLYWIVLFVLTMKRQIRHMIKYRYVPFSLGKQRYTG---RKPSPEKAS 188 The following BLAST results are available for this feature:
BLAST of EWM27495.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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