EWM27503.1, cds3173 (CDS) Nannochloropsis gaditana

Overview
NameEWM27503.1
Unique Namecds3173
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:933221..935164 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27503.1
Productatp synthase alpha subunit
Orig transcript idgnl|cribi|Naga_100099g7.8539.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:933221..935164 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0016740transferase activity
GO:0000166nucleotide binding
GO:0046961proton-transporting ATPase activity, rotational mechanism
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0016020membrane
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0046034ATP metabolic process
GO:0015986ATP synthesis coupled proton transport
Vocabulary: INTERPRO
TermDefinition
IPR004100ATPase_F1_a/bsu_N
IPR005294ATPase_F1-cplx_asu
IPR027417P-loop_NTPase
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR023366ATPase_asu-like
IPR003593AAA+_ATPase
Homology
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|585109767|gb|EWM27503.1| (atp synthase alpha subunit [Nannochloropsis gaditana])

HSP 1 Score: 1317.37 bits (3408), Expect = 0.000e+0
Identity = 647/647 (100.00%), Postives = 647/647 (100.00%), Query Frame = 0
Query:    1 MAPHADLFLAELFGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPVEGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKPEVEHGLALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGKVEWLEYLKKVRILFEQRAPSGEGAVLWTDEAGLVLLLMCCLQRQVLGHLDAGTVRALERIMAEELPRAAGWRKLRREVEALTQHADVRTVAEAFAEAHMTAQRRVKGVEREGDGGRGEFGQGGVTSPSMGKEGLALNEEVNRVYKRCSDVLAHAINYAQKKQQIAKLTNSADEAGDIARSRSQTNVSRRR 647
            MAPHADLFLAELFGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPVEGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKPEVEHGLALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGKVEWLEYLKKVRILFEQRAPSGEGAVLWTDEAGLVLLLMCCLQRQVLGHLDAGTVRALERIMAEELPRAAGWRKLRREVEALTQHADVRTVAEAFAEAHMTAQRRVKGVEREGDGGRGEFGQGGVTSPSMGKEGLALNEEVNRVYKRCSDVLAHAINYAQKKQQIAKLTNSADEAGDIARSRSQTNVSRRR
Sbjct:    1 MAPHADLFLAELFGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPVEGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKPEVEHGLALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGKVEWLEYLKKVRILFEQRAPSGEGAVLWTDEAGLVLLLMCCLQRQVLGHLDAGTVRALERIMAEELPRAAGWRKLRREVEALTQHADVRTVAEAFAEAHMTAQRRVKGVEREGDGGRGEFGQGGVTSPSMGKEGLALNEEVNRVYKRCSDVLAHAINYAQKKQQIAKLTNSADEAGDIARSRSQTNVSRRR 647          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|788100002|gb|KJV69300.1| (ATP synthase F1, alpha subunit [Candidatus Neoehrlichia lotoris str. RAC413])

HSP 1 Score: 202.601 bits (514), Expect = 3.825e-54
Identity = 143/464 (30.82%), Postives = 235/464 (50.65%), Query Frame = 0
Query:   10 AELFGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPV-EGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAA-TQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGKVEWLEYLKK 466
             E F   + +   G ++ + +  +A V GL +AK  ++V F+      T+G+++ LE +T +V + D    + EG      ++ + +PVG  +LGRVVDPLG P+                      + +   + S  LP       + +APGI+ R+P+   L+TGVK +D+  P+G GQ   + G   +GK+++A+  I NQ       S    L+C+YVAIGQ+  ++   V +L       + TVVAA   D  P +++LAP++ CA GE++RD+G   L+V DDLS+HA AY +M+  +++P   E   G    +H  LLER A+MS+ KGGG++T L ++E      Q G V          +   + S+ D  I L   L  + + PAV+V   +++   G+A   +  K     +++  A+  + E  AK    L   + +  E GKV  +E LK+
Sbjct:   14 VENFSNPIKEESIGEVISV-KDGIAVVYGLEKAKFSEVVIFNNG----TKGVILSLEYDTASVVIFDDDRNIKEGDIVKCTNSLMDVPVGFEMLGRVVDPLGNPI----------------------DGEGDINFSERLPV------EAKAPGIIDRQPVTEPLQTGVKTIDMLIPIGRGQRELIIGDRKTGKTSIAIDAIINQKAINDAVSEDEKLYCIYVAIGQKNSSIARVVNKLKESGAMNYTTVVAAGAADHVP-IQYLAPYSACAMGEFFRDRGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKMSNDKGGGSLTALPIIE-----TQAGDVSA-------YIPTNVISITDGQIFLESELFYKGIRPAVNVG--LSVSRVGSAAQIKSVKQVAGSVKLSLAQYRELEDFAKFGSDLDSHSQKMLERGKV-MMELLKQ 428          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|796978317|ref|WP_045809039.1| (ATP synthase subunit alpha [Candidatus Neoehrlichia lotoris])

HSP 1 Score: 202.601 bits (514), Expect = 3.914e-54
Identity = 143/464 (30.82%), Postives = 235/464 (50.65%), Query Frame = 0
Query:   10 AELFGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPV-EGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAA-TQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGKVEWLEYLKK 466
             E F   + +   G ++ + +  +A V GL +AK  ++V F+      T+G+++ LE +T +V + D    + EG      ++ + +PVG  +LGRVVDPLG P+                      + +   + S  LP       + +APGI+ R+P+   L+TGVK +D+  P+G GQ   + G   +GK+++A+  I NQ       S    L+C+YVAIGQ+  ++   V +L       + TVVAA   D  P +++LAP++ CA GE++RD+G   L+V DDLS+HA AY +M+  +++P   E   G    +H  LLER A+MS+ KGGG++T L ++E      Q G V          +   + S+ D  I L   L  + + PAV+V   +++   G+A   +  K     +++  A+  + E  AK    L   + +  E GKV  +E LK+
Sbjct:   17 VENFSNPIKEESIGEVISV-KDGIAVVYGLEKAKFSEVVIFNNG----TKGVILSLEYDTASVVIFDDDRNIKEGDIVKCTNSLMDVPVGFEMLGRVVDPLGNPI----------------------DGEGDINFSERLPV------EAKAPGIIDRQPVTEPLQTGVKTIDMLIPIGRGQRELIIGDRKTGKTSIAIDAIINQKAINDAVSEDEKLYCIYVAIGQKNSSIARVVNKLKESGAMNYTTVVAAGAADHVP-IQYLAPYSACAMGEFFRDRGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKMSNDKGGGSLTALPIIE-----TQAGDVSA-------YIPTNVISITDGQIFLESELFYKGIRPAVNVG--LSVSRVGSAAQIKSVKQVAGSVKLSLAQYRELEDFAKFGSDLDSHSQKMLERGKV-MMELLKQ 431          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|973053075|gb|KUK26688.1| (ATP synthase subunit alpha [Acetothermia bacterium 64_32])

HSP 1 Score: 202.216 bits (513), Expect = 5.616e-54
Identity = 146/425 (34.35%), Postives = 213/425 (50.12%), Query Frame = 0
Query:   33 LARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPV-EGAHAVLADTALSMPVGPSLLGRVVDPLGRPL---PDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVE---GEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERL 445
            +ARV GLR A   +L+ F  P   +  GLV+DL++++V VALL     + EG         L  PVG   LGRVVDPLGRPL   P +EPA   K                               +  +APG++ARKP+   L+TG+K +D   P+G GQ   + G   +GK+ +A+  I NQ            + C+YVAIGQ+   + + V  L R    ++  VVAA  + P  L+++AP+AGCA GEY+RD+G   L++ DDLS+HA AY E++  +++P   E   G     H  LLER A++SD  GGG++T L +VE   G++TS                +   + S+ D  I L   L  +   PA++    ++    GAA +P   K    QLR+  A+  D  A A+ A+ L
Sbjct:   37 IARVWGLRSAVASELLRF--PGDIY--GLVLDLQEDSVGVALLGPDEGIKEGDEVRRTGRVLQTPVGEGFLGRVVDPLGRPLDGGPPIEPAGYRK-------------------------------TDEKAPGVIARKPVDTPLQTGIKCIDALTPIGRGQRELIIGDRRTGKTAIAIDTIINQKGQG--------VFCIYVAIGQKSSTIAKVVDALKRYGAMEYTVVVAAAAEDPAPLQYIAPYAGCAMGEYFRDKGQDALIIYDDLSKHAVAYREISLLLRRPPGREAYPGDIFYTHSRLLERAARLSDEHGGGSLTALPIVETKAGDITS---------------YIPTNLISITDGQIYLEADLFNKGQRPAMNAGLSVSR-VGGAAQIPA-MKEVAGQLRLELAQYRDLAAFAEFAQEL 401          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|973089497|gb|KUK49585.1| (ATP synthase subunit alpha, partial [Parcubacteria bacterium 33_209])

HSP 1 Score: 199.519 bits (506), Expect = 1.641e-53
Identity = 140/435 (32.18%), Postives = 215/435 (49.43%), Query Frame = 0
Query:   30 QSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALL--DKTMPVEGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGK 457
            +  +AR+SGLR  +  ++V F   DG+  QGLV++LE+  V   +L  DK +  EG          S+PVG +LLGRVVDPLGRPL                      + K    +  SLP       +R+ P ++ R+P+   + TG+K++D   P+G GQ   + G  G GK+ +AL  I NQ      P       C+YVA GQ+   V+  +  L +    ++ TVV A  D P G  +LAPFAG + GEY+RD     L+V DDL+R A A+ E++  +++P   E   G    LH  LLER A +SD  GGG++T L ++E      Q G + G        +   + S+ D  I L+  L ++   PA++V   ++   + A +  +  K    +L++  A+  + E  ++  E L  Q  +  E GK
Sbjct:   30 KDGVARISGLRSVENFEMVEF---DGAGVQGLVLNLEEYEVGAIILGSDKKIK-EGTVVKRTKKVFSVPVGENLLGRVVDPLGRPL----------------------DGKGEIKTDQSLPL------ERKGPSVIERQPVTKPIHTGIKMVDALIPIGRGQRELIIGDRGLGKTAVALDAIINQKNEKDRP------KCIYVACGQKKSKVKRIIATLEKAGAMEYTTVVCAFPDDPAGFVYLAPFAGASIGEYFRDNKQDALIVYDDLTRQAWAWREISLILRRPPGREAYPGDVFFLHSRLLERAAMLSDEMGGGSLTALPIIE-----TQAGDISG-------YIPTNVISITDGQIFLDATLFKKEQKPAINVGTSVSRVGSSAQI--KATKKVAGRLKLDLAQFQELERFSEFTEELDPQTKKTIERGK 412          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|1200568088|gb|OUW79016.1| (F0F1 ATP synthase subunit alpha [Candidatus Marinimicrobia bacterium TMED217])

HSP 1 Score: 200.29 bits (508), Expect = 2.790e-53
Identity = 151/477 (31.66%), Postives = 237/477 (49.69%), Query Frame = 0
Query:   11 ELFGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPV-EGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGK--VEWL---EYL-----KKVRILF 471
            E +  VV+ +  G ++++    +AR SGL      +LV    P+  F  G+ ++LE++ V + L  +T  + EG  A      + +PVG  +LGRVV+PLG+P+                      + K   +SS +LP       +R+A G+MAR P+   L+TG+K +D   P+G GQ   + G   +GK+ +A+  I NQ       +P   ++CVYVAIGQ+   V   V EL  +   ++  VVAA    P  ++++AP+AGCA GEY+RD G   L+V DDLS+ A AY +M+  +++P   E   G    LH  LLER +++S   GGG++T L V+E      QEG V          +   + S+ D  I L   L    + PA+DV   +++   G     +  K     LR+  A+  + EA AK    L    +++   G+  VE L   +Y+     K+V I+F
Sbjct:   17 EKYDNVVDVSEVGEIIEVG-DGVARASGLENVMSSELVEL--PNDVF--GMALNLEEDNVGLVLFGETRLIKEGDIAKRTGRVVEVPVGKEMLGRVVNPLGQPI----------------------DGKGPINSSETLPI------ERKALGVMARSPVKEPLQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKYTHETDNP---VYCVYVAIGQKASTVASLVSELESQGAMEYTIVVAANASDPAPMQYIAPYAGCAMGEYFRDNGQHSLIVYDDLSKQAVAYRQMSLVLRRPPGREAFPGDVFYLHSRLLERASKLSADHGGGSLTALPVIE-----TQEGDVSA-------YIPTNVISITDGQIYLETNLFNSGIRPAIDVG--LSVSRVGGNAQIKAMKSVAGTLRLDLAQYRELEAFAKFGSDLDKSTIDQLTRGERMVEILKQNQYVPMPVEKQVAIIF 443          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|1200485285|gb|OUV99953.1| (F0F1 ATP synthase subunit alpha [Candidatus Marinimicrobia bacterium TMED144])

HSP 1 Score: 199.519 bits (506), Expect = 5.571e-53
Identity = 159/544 (29.23%), Postives = 256/544 (47.06%), Query Frame = 0
Query:   13 FGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALL-DKTMPVEGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERL----------GIQAVEEGEEGKVEWLEYLKKVRILFEQRAPSGEGAVLWTDEAGLVLLLMCCLQRQVLGHLDAGTVRALERIMAEELPRAAGWRKLRREVEALTQ 540
            F   ++ +  G ++ +    +ARVSGL      +LV    P+G +  G+ ++LE++ V + L  D  +  EG  A    + + +PVG ++LGRVV+PLG+P+    P      +D+ ES                    PI S   +A G+MAR P+   L+TG+K +D   P+G GQ   + G   +GK+ +A+  I NQ        P   ++C+YVAIGQ+   V   V EL      ++ TVVAA       L+++AP++GCA GEY RD G   L+V DDLS+ A AY +M+  +++P   E   G    LH  LLER +++S   GGG++T L ++E      QEG V          +   + S+ D  I L   L    + PA+DV   +++   G     +  K     LR+  A+  + EA AK    L          G + VE  ++G+   ++  K++ I+F     +     L   E   V       +  +  +LDA     L+ I++E L   +  + L + +   T+
Sbjct:   19 FDSSIDVSEVGEVIDVGD-GVARVSGLENVMSSELVEL--PNGIY--GMALNLEEDNVGLVLFGDSRLVKEGDLAKRTGSVVEVPVGDAMLGRVVNPLGQPIDGKGP------IDTKES-------------------LPIES---KAHGVMARSPVNQPLQTGIKAVDSMIPIGRGQRELIIGDRQTGKTAVAIDXIINQKYTHQTDQP---VYCIYVAIGQKASTVASIVSELESNGAMEYTTVVAANASDEAPLQYIAPYSGCAMGEYXRDNGKHGLIVYDDLSKQAVAYRQMSLVLRRPPGREAFPGDVFYLHSRLLERASKLSSELGGGSLTALPIIE-----TQEGDVSA-------YIPTNVXSITDGQIYLEKNLFNSGIRPAIDVG--ISVSRVGGNAQIKAMKGVAGTLRLDLAQYRELEAFAKFGSDLDKSTQAQLTRGERMVEVLKQGQYMPMDVEKQISIIF-----AASKGFLDNIEVEKV----SVYENDLFDYLDANNSEDLKAIVSEGLISGSVEKNLEKAISEFTR 503          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|1084185604|gb|OGL78253.1| (F0F1 ATP synthase subunit alpha [Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_54_23] >gi|1084191097|gb|OGL83503.1| F0F1 ATP synthase subunit alpha [Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_55_36] >gi|1084198182|gb|OGL90174.1| F0F1 ATP synthase subunit alpha [Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_54_37])

HSP 1 Score: 199.904 bits (507), Expect = 7.946e-53
Identity = 149/469 (31.77%), Postives = 238/469 (50.75%), Query Frame = 0
Query:   33 LARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALL-DKTMPVEGAHAVLADTALSMPVGPSLLGRVVDPLGRPLP-----------DLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERLGIQAVEEGEEGKVEWLEYLKKVRILFEQRAPSGEGAVLW 484
            +ARVSGL   K+ ++V F    G+   G+ ++LE+++V V +L ++    EG    L    LS+PVG   +GRVV+PLG P+            ++E ++  K  D T S S   N++  S   A  P   I      APG++AR+ +   L+TG+K +D   P+G GQ   + G   +GK+ +A+  I NQ     +        C+YVAIGQ+   V + V +L +    +H  VV A    P  L ++AP+AGCA GEY+ D+G  VLVV DDLS+ A AY +M+  +++P   E   G    LH  LLER A+++ A GGG++T L ++E      Q G V          +   + S+ D  I L   L  + + PA++V   +++   G+A   +  K    ++R+  A+  +  A A+    L  +  +  E GK    E LK+ +  +E  A + + AV++
Sbjct:   38 VARVSGLGSVKMSEMVEFIPEKGACVSGVAMNLEEDSVGVIVLGEQERLKEGDEVRLTGRILSVPVGEGFIGRVVNPLGEPMDGKGKIVEASIGNVEASVRDKGRDITRSESG-VNSRGQSREVAYYPVEKI------APGVIARESVNTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIAMDTIVNQKGTGVI--------CIYVAIGQKESKVAKMVADLEKSGAMEHTIVVIAGASSPAALWYIAPYAGCAMGEYFMDKGKDVLVVYDDLSKQAWAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNKAHGGGSLTALPIIE-----TQAGDVSA-------YIPTNVISITDGQIFLEADLFYQGIRPALNVG--ISVSRVGSAAQVKAMKKVAGKMRLEMAQYRELAAFAQFGSDLDPETRQRLERGK-RLTEILKQDQ--YEPMAVAHQVAVIY 474          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|1200387428|gb|OUV05808.1| (F0F1 ATP synthase subunit alpha [Candidatus Marinimicrobia bacterium TMED80])

HSP 1 Score: 198.364 bits (503), Expect = 1.617e-52
Identity = 142/441 (32.20%), Postives = 218/441 (49.43%), Query Frame = 0
Query:   11 ELFGGVVNKAREGTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALLDKTMPV-EGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERL 445
            E +   ++ A  G ++++    +AR SGL      +LV    P+  F  G+ ++LEQ+ V + L   T  V EG  A      + +PVG  LLGRVV+PLG+PL                      + K   +SS SLP       +R+A G+MAR P+   L+TG+K +D   P+G GQ   + G   +GK+ +A+  I NQ  +    +  +P+ CVYVAIGQ+   V   V E  ++   +   VVAA    P  ++++AP+AGCA GE++RD G   L+V DDLS+ A AY +M+  +++P   E   G    LH  LLER +++S+  G G++T L ++E      QEG V          +   + S+ D  I L   L    + PA+DV   +++   G     +  K     LR+  A+  + EA AK    L
Sbjct:   17 EKYNNDIDVAEVGEIIEVG-DGVARASGLENVMSSELVEL--PNDVF--GMALNLEQDNVGLVLFGDTTKVKEGDIAKRTGKVVEVPVGKELLGRVVNPLGQPL----------------------DGKGPINSSKSLPV------ERKALGVMARSPVNEPLQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKNSQ---NSDSPVFCVYVAIGQKASTVASLVSEXEQQGAMEXTVVVAANASDPAPMQYIAPYAGCAMGEFFRDNGQHALIVYDDLSKQAVAYRQMSLVLRRPPGREAFPGDVFYLHSRLLERASKLSEDLGSGSLTALPIIE-----TQEGDVSA-------YIPTNVISITDGQIYLETNLFNSGIRPAIDVG--LSVSRVGGNAQIKAMKKVAGTLRLDLAQYRELEAFAKFGSDL 407          
BLAST of EWM27503.1 vs. NCBI_GenBank
Match: gi|504063060|ref|WP_014297054.1| (MULTISPECIES: ATP synthase subunit alpha [Marinitoga] >gi|372102079|gb|AEX85983.1| proton translocating ATP synthase, F1 alpha subunit [Marinitoga piezophila KA3] >gi|1129890363|gb|APT76406.1| ATP F0F1 synthase subunit alpha [Marinitoga sp. 1137])

HSP 1 Score: 198.364 bits (503), Expect = 1.717e-52
Identity = 138/429 (32.17%), Postives = 213/429 (49.65%), Query Frame = 0
Query:   23 GTLVQIHQSALARVSGLREAKIHDLVHFSQPDGSFTQGLVVDLEQNTVAVALL-DKTMPVEGAHAVLADTALSMPVGPSLLGRVVDPLGRPLPDLEPAMATKQVDSTESPSDRTNTKSSSSSSASLPSTPIMSSQRRAPGIMARKPLCHRLRTGVKVLDVFHPLGHGQSVGLFGRPGSGKSTLALQIIANQNTAAPVPSPTAPLHCVYVAIGQEPRAVQEAVGELIRRACFQHVTVVAATQDMPPGLRFLAPFAGCAQGEYWRDQGGRVLVVCDDLSRHAAAYSEMAKFMQKP---EVEHG--LALHGPLLERCAQMSDAKGGGAMTGLVVVEGEVTSGQEGGVGGGKEDGGHGLAHRINSLVDHAITLNVGLAQRRVFPAVDVTQQMNLPSAGAALLPEPAKWCVQQLRMMWAEALDKEAGAKLAERL 445
            G ++Q+    +AR  GLR+A   +LV     +G    G+ ++LE++ V + +L D  +  EG   V       +PVG  LLGRVV+PLG+PL               + P +  NT+            PI   + +APG++ RKP+   L+TG+K +D   P+G GQ   + G   +GK+ +A+  I NQ            +HC+YVA+GQ+  +V   V +L +    ++ TVV A+   P  L +LAP+AGCA GEY+   G   LVV DDLS+HAAAY E++  +++P   E   G    LH  LLER A++++  GGG++T L ++E +              D    +   + S+ D  I L   L      PAV+V   +++   G A   +  K     LR+  A+  + EA A+ A  L
Sbjct:   28 GWIIQVG-DGIARAYGLRDAMASELVEIHTDEGEVIDGIALNLEEDNVGIIILGDYKVIKEGNKVVRTGRIAEVPVGEELLGRVVNPLGQPL-------------DGKGPINAKNTR------------PI---EFKAPGVVLRKPVDTPLQTGLKAIDTMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGKG--------VHCIYVAVGQKSSSVARTVAKLEQHGAMEYTTVVVASASDPASLLYLAPYAGCAMGEYFMFNGKDALVVYDDLSKHAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAARLNEKYGGGSLTALPIIETQAN------------DVSAYIPTNVISITDGQIYLEPSLFYAGQRPAVNVG--LSVSRVGGAAQIKAMKQVAGSLRLDLAQYRELEAFAQFATEL 405          
The following BLAST results are available for this feature:
BLAST of EWM27503.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109767|gb|EWM27503.1|0.000e+0100.00atp synthase alpha subunit [Nannochloropsis gadita... [more]
gi|788100002|gb|KJV69300.1|3.825e-5430.82ATP synthase F1, alpha subunit [Candidatus Neoehrl... [more]
gi|796978317|ref|WP_045809039.1|3.914e-5430.82ATP synthase subunit alpha [Candidatus Neoehrlichi... [more]
gi|973053075|gb|KUK26688.1|5.616e-5434.35ATP synthase subunit alpha [Acetothermia bacterium... [more]
gi|973089497|gb|KUK49585.1|1.641e-5332.18ATP synthase subunit alpha, partial [Parcubacteria... [more]
gi|1200568088|gb|OUW79016.1|2.790e-5331.66F0F1 ATP synthase subunit alpha [Candidatus Marini... [more]
gi|1200485285|gb|OUV99953.1|5.571e-5329.23F0F1 ATP synthase subunit alpha [Candidatus Marini... [more]
gi|1084185604|gb|OGL78253.1|7.946e-5331.77F0F1 ATP synthase subunit alpha [Candidatus Uhrbac... [more]
gi|1200387428|gb|OUV05808.1|1.617e-5232.20F0F1 ATP synthase subunit alpha [Candidatus Marini... [more]
gi|504063060|ref|WP_014297054.1|1.717e-5232.17MULTISPECIES: ATP synthase subunit alpha [Marinito... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3181rna3181Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications