EWM27501.1, cds3172 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|585109765|gb|EWM27501.1| (Putative thiol-disulfide oxidoreductase DCC [Nannochloropsis gaditana]) HSP 1 Score: 484.952 bits (1247), Expect = 2.374e-173 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query: 1 MARGLLRGIWALSSATSAASFVVPVFRHAGGVARGAPLSRSMARGIGSGLSSPWDVVSAIPSRSLSSLKATSVGSTTTSTAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDVDGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEIDWDKL 237
MARGLLRGIWALSSATSAASFVVPVFRHAGGVARGAPLSRSMARGIGSGLSSPWDVVSAIPSRSLSSLKATSVGSTTTSTAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDVDGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEIDWDKL
Sbjct: 1 MARGLLRGIWALSSATSAASFVVPVFRHAGGVARGAPLSRSMARGIGSGLSSPWDVVSAIPSRSLSSLKATSVGSTTTSTAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDVDGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEIDWDKL 237
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|873218433|emb|CEM39536.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 185.267 bits (469), Expect = 3.189e-55 Identity = 84/142 (59.15%), Postives = 107/142 (75.35%), Query Frame = 0
Query: 89 WKINLLYDGKCSLCMKEVTFLQKRDVDGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDF---SCDDE 227
W+I+LLYDG+C LC+KE+ FL+KRD +G I FTDL P +K EE+G VD+E GM+ IHAV G+V+ GVEVFRRVYE IGLGWVYAATK+P IG A D AYD WA RL++TGRPDL ++++R +L+ K C+DE
Sbjct: 60 WQIDLLYDGECPLCLKEIDFLKKRDTEGKIQFTDLASPGYKQEEHGNVDFERGMRSIHAVTSSGDVISGVEVFRRVYEAIGLGWVYAATKLPVIGPAVDVAYDIWASNRLRLTGRPDLAKVMEERAAKLRDKSAYPQGCEDE 201
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|1210088909|dbj|BAY08045.1| (hypothetical protein NIES2098_11720 [Calothrix sp. NIES-2098]) HSP 1 Score: 180.644 bits (457), Expect = 3.391e-54 Identity = 88/155 (56.77%), Postives = 107/155 (69.03%), Query Frame = 0
Query: 80 TAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDV-DGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEID 233
T P S WKI LLYDG+C LCM+EV FLQKRD G + F D+ D N+ E +GGVD+E M IHAVLPDG VV+ VEVFRRVYE++G+GW+Y+ TK+P +GA AD+ Y WA RL ITGRP LE ++ QRQE L C+ EG C ID
Sbjct: 18 TQPVSTAPSWKIELLYDGECPLCMREVNFLQKRDAGRGLVKFVDIADDNYNPEAHGGVDFETAMGRIHAVLPDGTVVQNVEVFRRVYEILGMGWIYSVTKLPIVGAIADFLYGIWAKWRLAITGRPKLEDVVAQRQERL------CNTEGRCRID 166
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|1197919035|ref|WP_086836717.1| (DUF393 domain-containing protein [Nostoc sp. RF31Y] >gi|1195997626|gb|OUL20030.1| thiol-disulfide oxidoreductase [Nostoc sp. RF31Y]) HSP 1 Score: 177.948 bits (450), Expect = 4.583e-53 Identity = 89/155 (57.42%), Postives = 106/155 (68.39%), Query Frame = 0
Query: 80 TAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDVD-GNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEID 233
T P S WKI LLYDG+C LCM+EV FLQKRD G + F D+ D ++ E +GGVD+E M IHAVLPDG VV+ VEVFRRVY ++G+GWVYA T++P IGA AD+ Y WA RL ITGRP LE I+ QRQE L C+ EG C ID
Sbjct: 16 TQPVSTAPSWKIELLYDGECPLCMREVNFLQKRDAGRGLVKFVDIADDDYNPEAHGGVDFETAMGRIHAVLPDGTVVQNVEVFRRVYAILGMGWVYAITQLPIIGAIADFLYGVWAKWRLAITGRPKLEDIVAQRQERL------CNTEGRCRID 164
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|1210101759|dbj|BAY20889.1| (hypothetical protein NIES2100_06330 [Calothrix sp. NIES-2100]) HSP 1 Score: 177.178 bits (448), Expect = 6.895e-53 Identity = 88/170 (51.76%), Postives = 117/170 (68.82%), Query Frame = 0
Query: 65 LSSLKATSVGSTTTSTAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDVD-GNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEID 233
+SS+ ++ + + + STAP WKI LLYDG+C LCM+EV FLQKRD G + F D+ D ++ EE+GGVD+E M IHAVL DG VV+ VEVFRRVY ++G+GWVY+ TK+P +GA AD+ Y WA RL ITGRP LE ++++RQE L C+ +G C ID
Sbjct: 1 MSSI-SSEILTQSASTAP-----AWKIELLYDGECPLCMREVNFLQKRDAGRGLVHFVDIADDDYNPEEHGGVDFETAMGRIHAVLADGTVVQNVEVFRRVYAILGMGWVYSVTKLPIVGAIADFLYGIWAKWRLAITGRPTLETVVQERQERL------CNTQGRCRID 158
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|1210162651|dbj|BAY81732.1| (hypothetical protein NIES267_12090 [Calothrix parasitica NIES-267]) HSP 1 Score: 176.792 bits (447), Expect = 1.019e-52 Identity = 81/163 (49.69%), Postives = 114/163 (69.94%), Query Frame = 0
Query: 75 STTTSTAPDSDV---KPWKINLLYDGKCSLCMKEVTFLQKRDVD-GNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEID 233
+++TST +S+ + W+I LLYDG+C LC++EV FLQK+D G + F D+ ++ EEN G+D+E M IH +L DG V+K VEVFRRVYE +G+GWVYA TK+P +GA A++ Y WA RL++TGRPDL+ ++KQRQE+L C+DE C +D
Sbjct: 2 TSSTSTINNSNQTLNQTWEIKLLYDGECPLCLREVNFLQKKDAGRGKVAFVDIASDDYNPEENAGIDFETAMGRIHGILADGTVIKNVEVFRRVYETLGMGWVYAITKLPILGALANFVYGIWADLRLKLTGRPDLQTVIKQRQEKL-----GCNDESRCRVD 159
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|1210177141|dbj|BAY96201.1| (hypothetical protein NIES37_01280 [Tolypothrix tenuis PCC 7101] >gi|1210254290|dbj|BAZ73292.1| hypothetical protein NIES50_18560 [Aulosira laxa NIES-50]) HSP 1 Score: 177.563 bits (449), Expect = 1.185e-52 Identity = 84/165 (50.91%), Postives = 114/165 (69.09%), Query Frame = 0
Query: 69 KATSVGSTTTSTAPDSDVKP-WKINLLYDGKCSLCMKEVTFLQKRDV-DGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECE 231
K + + T S + D+ P W+I LLYDG+C LCM+EV FLQKRD G + F D+ + N+ E +GGVDYE M IHAVLPDG +VK +EVFRR+YE++G+GWVY+ TK+P IGA AD+ Y WA RL +TGRP+L+ I+ QRQ+++ +C+ EG C
Sbjct: 30 KLSMSSANTQSYSYDAVTSPSWQIELLYDGECPLCMREVNFLQKRDAGRGLVNFVDIANDNYNPEAHGGVDYETAMGRIHAVLPDGTLVKNIEVFRRIYEILGMGWVYSLTKLPVIGAIADFLYGIWANWRLAVTGRPNLKTIITQRQQKI-----ACNTEGRCR 189
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|1197741085|ref|WP_086690854.1| (DUF393 domain-containing protein [Nostoc sp. T09] >gi|1195999359|gb|OUL21699.1| thiol-disulfide oxidoreductase [Nostoc sp. T09]) HSP 1 Score: 176.792 bits (447), Expect = 1.246e-52 Identity = 88/155 (56.77%), Postives = 107/155 (69.03%), Query Frame = 0
Query: 80 TAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDV-DGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEID 233
T P S WKI LLYD +C LCM+EV FLQKRD G + F D+ D ++ E +GGVD+E M IHAVLP+G VV+ VEVFRRVYE++G+GWVYA T++P IGA AD+ Y WA RL ITGRP LE I+ QRQE L +C+ EG C ID
Sbjct: 16 TPPVSTAPVWKIELLYDSECPLCMREVNFLQKRDAGRGLVKFVDIADDDYNPEAHGGVDFETAMGRIHAVLPNGTVVQNVEVFRRVYEILGMGWVYAITQLPIIGAIADFLYGVWAKWRLAITGRPKLEDIVAQRQERL-----ACNTEGRCRID 165
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|1197832525|ref|WP_086767018.1| (DUF393 domain-containing protein [Nostoc sp. 106C] >gi|1195999162|gb|OUL21510.1| thiol-disulfide oxidoreductase [Nostoc sp. 106C]) HSP 1 Score: 176.407 bits (446), Expect = 1.469e-52 Identity = 88/155 (56.77%), Postives = 105/155 (67.74%), Query Frame = 0
Query: 80 TAPDSDVKPWKINLLYDGKCSLCMKEVTFLQKRDV-DGNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGECEID 233
T P S WKI LLYD +C LCM+EV FLQKRD G + F D+ D ++ E +GGVD+E M IHAVLPDG VV+ VEVFRRVY ++G+GWVYA T++P IGA AD+ Y WA RL ITGRP LE I+ QRQE L C+ EG C ID
Sbjct: 16 TQPVSSAHTWKIELLYDSECPLCMREVNFLQKRDAGRGLVKFVDIADDDYNPEAHGGVDFETAMGRIHAVLPDGTVVQNVEVFRRVYAILGMGWVYAITQLPIIGAIADFLYGVWAKWRLAITGRPKLEDIVAQRQERL------CNTEGRCRID 164
BLAST of EWM27501.1 vs. NCBI_GenBank
Match: gi|797208337|ref|WP_045869288.1| (DUF393 domain-containing protein [Tolypothrix sp. PCC 7601] >gi|1210174771|dbj|BAY93846.1| hypothetical protein NIES3275_58900 [Fremyella diplosiphon NIES-3275]) HSP 1 Score: 176.022 bits (445), Expect = 1.962e-52 Identity = 84/158 (53.16%), Postives = 111/158 (70.25%), Query Frame = 0
Query: 75 STTTSTAPDSDVKP-WKINLLYDGKCSLCMKEVTFLQKRDVD-GNILFTDLNDPNFKAEENGGVDYEAGMKYIHAVLPDGEVVKGVEVFRRVYEVIGLGWVYAATKIPFIGAAADWAYDQWAIRRLQITGRPDLEVILKQRQEELKKKDFSCDDEGEC 230
+ T S + D+ P W+I LLYD +C LCM+EV FLQKRD G + F D+ D N+ E +GGVDYE M IHAVLPDG VVK +EVFRR+YE++G+GWVY+ TK+P IGA AD+ Y WA RL +TGRP+L+ I+ QRQ+++ +C+ EG C
Sbjct: 4 ANTQSYSYDAVTSPSWQIELLYDSECPLCMREVNFLQKRDAGRGLVNFVDIADDNYNPEVHGGVDYETAMGRIHAVLPDGTVVKNIEVFRRIYEILGMGWVYSLTKLPIIGAIADFLYGIWANWRLAVTGRPNLKTIIAQRQQKI-----ACNTEGRC 156 The following BLAST results are available for this feature:
BLAST of EWM27501.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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