EWM27490.1, cds3171 (CDS) Nannochloropsis gaditana

Overview
NameEWM27490.1
Unique Namecds3171
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:929287..929298 +
Alignment locationCM002460.1:929483..929774 +
Alignment locationCM002460.1:929985..930122 +
Alignment locationCM002460.1:930313..930505 +
Alignment locationCM002460.1:930593..930659 +

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Properties
Property NameValue
Protein idEWM27490.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100099g5.8526.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:929287..929298 +
CM002460.1supercontigCM002460.1:929483..929774 +
CM002460.1supercontigCM002460.1:929985..930122 +
CM002460.1supercontigCM002460.1:930313..930505 +
CM002460.1supercontigCM002460.1:930593..930659 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27490.1 vs. NCBI_GenBank
Match: gi|585109754|gb|EWM27490.1| (hypothetical protein Naga_100099g5 [Nannochloropsis gaditana])

HSP 1 Score: 486.108 bits (1250), Expect = 6.209e-174
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 
Query:    1 MYKAGRGLRYISGVPAVIRSRNFPPPRRLRAHDGSKTRNCNHVVSPFLQRSAVTCLRSAQLGAQWSFENSNEMWQGQGCDQNDAVTARSPSILHLHLDEPHDCSFSIHQRCTVHPDGHGGRSRGCGGLHACLHQSRRVVYERGGGGGVYNGVNTELPPPYYAVAFALVLLVVSGIQQLSLGNVFDDEEKSASSSGAVARRMNMRNRSFFKKKVQSIKRSKKFELLMQQDNETI 233
            MYKAGRGLRYISGVPAVIRSRNFPPPRRLRAHDGSKTRNCNHVVSPFLQRSAVTCLRSAQLGAQWSFENSNEMWQGQGCDQNDAVTARSPSILHLHLDEPHDCSFSIHQRCTVHPDGHGGRSRGCGGLHACLHQSRRVVYERGGGGGVYNGVNTELPPPYYAVAFALVLLVVSGIQQLSLGNVFDDEEKSASSSGAVARRMNMRNRSFFKKKVQSIKRSKKFELLMQQDNETI
Sbjct:    1 MYKAGRGLRYISGVPAVIRSRNFPPPRRLRAHDGSKTRNCNHVVSPFLQRSAVTCLRSAQLGAQWSFENSNEMWQGQGCDQNDAVTARSPSILHLHLDEPHDCSFSIHQRCTVHPDGHGGRSRGCGGLHACLHQSRRVVYERGGGGGVYNGVNTELPPPYYAVAFALVLLVVSGIQQLSLGNVFDDEEKSASSSGAVARRMNMRNRSFFKKKVQSIKRSKKFELLMQQDNETI 233
The following BLAST results are available for this feature:
BLAST of EWM27490.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109754|gb|EWM27490.1|6.209e-174100.00hypothetical protein Naga_100099g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3179rna3179Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications