EWM30225.1, cds317 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|585112884|gb|EWM30225.1| (ormdl family protein [Nannochloropsis gaditana]) HSP 1 Score: 418.698 bits (1075), Expect = 3.640e-148 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
Query: 1 MGVRDSGNGLYSGMYFDGDRPASLYNKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDDVPDDLLSSPSRPTATAAGGAAAAGKKNR 204
MGVRDSGNGLYSGMYFDGDRPASLYNKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDDVPDDLLSSPSRPTATAAGGAAAAGKKNR
Sbjct: 1 MGVRDSGNGLYSGMYFDGDRPASLYNKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDDVPDDLLSSPSRPTATAAGGAAAAGKKNR 204
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|298706389|emb|CBJ29398.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 144.05 bits (362), Expect = 5.136e-40 Identity = 72/160 (45.00%), Postives = 101/160 (63.12%), Query Frame = 0
Query: 18 GDRPAS-LYNKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
GD A + NKN EW++ + W +Y+ F+A T+ + +++ + + T+ +VVH ++ FY FHW KGSPD F+QGE+NGLT WEQ++ G+PWTKTKK +V T L V+DY YLA+N PV L ++ K P MHRVR+ N T GIDD
Sbjct: 25 GDISAGGMSNKNTEWMQNSYTWVMYVLFIA---TIWGVVHMTQIFSVAKSTTMVNVVHGLITFYFFHWTKGSPDEFTQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYQPRYLAVNLPVCCIL-LLAKSPLMHRVRILDINATTGIDD 180
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|566022577|gb|ETI45488.1| (hypothetical protein F443_09920 [Phytophthora parasitica P1569] >gi|567959876|gb|ETK85440.1| hypothetical protein L915_09717 [Phytophthora parasitica] >gi|567988609|gb|ETL38884.1| hypothetical protein L916_09621 [Phytophthora parasitica] >gi|568017812|gb|ETL91989.1| hypothetical protein L917_09544 [Phytophthora parasitica] >gi|568048228|gb|ETM45287.1| hypothetical protein L914_09587 [Phytophthora parasitica] >gi|570326199|gb|ETO74147.1| hypothetical protein F444_10015 [Phytophthora parasitica P1976] >gi|570950055|gb|ETP15312.1| hypothetical protein F441_09869 [Phytophthora parasitica CJ01A1] >gi|570983589|gb|ETP43388.1| hypothetical protein F442_09823 [Phytophthora parasitica P10297] >gi|970645432|gb|KUF85903.1| ORM1 protein 2 [Phytophthora nicotianae] >gi|970660016|gb|KUF97607.1| Ras-related protein RABH1e [Phytophthora nicotianae]) HSP 1 Score: 127.872 bits (320), Expect = 4.127e-34 Identity = 68/151 (45.03%), Postives = 90/151 (59.60%), Query Frame = 0
Query: 26 NKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
NKNV W+ FW Y+ +A + + S G LT +V+H +V F + HWIKGSPD+ S G++ LT +EQI+ G PWT TKK ++ T L AAS TDYD +L IN P++ L I+ K+PE RVR+FG N T GIDD
Sbjct: 8 NKNVNWMDSRGFWTFYIMLLASLYMAMPIAFPSH----GDALTAVNVIHGVVSFGIMHWIKGSPDDNSMGDYRELTFYEQIDQGHPWTNTKKFLMMIPTFLFLAASVATDYDTRHLLINFPIWATL-ILAKLPEFDRVRIFGINSTVGIDD 153
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|301091281|ref|XP_002895828.1| (ORM1-like protein [Phytophthora infestans T30-4] >gi|262096539|gb|EEY54591.1| ORM1-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 127.487 bits (319), Expect = 6.941e-34 Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 0
Query: 26 NKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
NKNV W+ FW Y+ +A +L ++ P G LT +V+H +V F + HWIKGSPD+ S G++ LT +EQI+ G PWT TKK ++ T L AAS TDYD +L IN P++ L I+ K+PE+ RVR+FG N T GIDD
Sbjct: 8 NKNVNWMDSRGFWTFYIMLLA---SLYMAMPIAFPTH-GDALTAVNVIHGVVSFGIMHWIKGSPDDNSMGDYRELTFYEQIDQGHPWTNTKKFLMMIPTFLFLAASVATDYDTLHLLINFPIWATL-ILAKLPELDRVRIFGINSTVGIDD 153
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|695414951|ref|XP_009526436.1| (hypothetical protein PHYSODRAFT_354575 [Phytophthora sojae] >gi|348677561|gb|EGZ17378.1| hypothetical protein PHYSODRAFT_354575 [Phytophthora sojae]) HSP 1 Score: 127.102 bits (318), Expect = 9.503e-34 Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 0
Query: 26 NKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
NKNV W+ FW Y+ +A + + + G LT +V+H +V F + HW+KGSPD+ S G++ LT +EQI+ G PWT TKK ++ T L AAS TDYD +L IN P++ L I+ K+PE+ RVR+FG N T GIDD
Sbjct: 8 NKNVNWMDSRGFWTFYIMLLASLYMAMPIIFPTH----GDALTAVNVIHGVVSFGIMHWVKGSPDDNSMGDYRELTFYEQIDQGHPWTNTKKFLMMIPTFLFLAASVATDYDTRHLLINFPIWATL-ILAKLPELDRVRIFGINSTVGIDD 153
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|1214712538|gb|OWZ23474.1| (Alpha-1-acid glycoprotein 1-like protein [Phytophthora megakarya]) HSP 1 Score: 126.716 bits (317), Expect = 1.219e-33 Identity = 68/151 (45.03%), Postives = 89/151 (58.94%), Query Frame = 0
Query: 26 NKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
NKNV W+ FW Y+ +A + + S G LT V+H +V F + HWIKGSPD+ S G++ LT +EQI+ G PWT TKK ++ T L AAS TDYD +L IN P++ L I+ K+PE RVR+FG N T GIDD
Sbjct: 8 NKNVNWMDSRGFWTFYILLLASLYMAMPIVFPSH----GDALTAVSVIHGVVSFGIMHWIKGSPDDNSMGDYRELTFYEQIDQGHPWTNTKKFLMMIPTFLFLAASVATDYDTRHLLINFPIWATL-ILAKLPEFDRVRIFGINSTVGIDD 153
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|635361581|emb|CCI49500.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 120.168 bits (300), Expect = 9.205e-31 Identity = 64/154 (41.56%), Postives = 93/154 (60.39%), Query Frame = 0
Query: 26 NKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKP--EDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNF-SQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
NKNV W+ FW F+V ++ ++ ++ P V T +V+H ++ F + HWIKGSPD+ S G++ LT +EQI++ PW+ TKK +V T + AS TDYD +L IN P++ F+ I+ K+PE HRVR+FG N T GIDD
Sbjct: 25 NKNVNWMETRGFW-------TFYVLVIGMSYMAMPFFVPANEVWTAVNVIHGLISFGIMHWIKGSPDDSNSMGDYRELTFYEQIDENHPWSGTKKFLMVVPTMIFMLASVTTDYDTQHLMINFPIW-FVLILAKLPEFHRVRIFGINSTVGIDD 170
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|635361580|emb|CCI49499.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 119.398 bits (298), Expect = 1.138e-30 Identity = 64/154 (41.56%), Postives = 93/154 (60.39%), Query Frame = 0
Query: 26 NKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKP--EDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNF-SQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
NKNV W+ FW F+V ++ ++ ++ P V T +V+H ++ F + HWIKGSPD+ S G++ LT +EQI++ PW+ TKK +V T + AS TDYD +L IN P++ F+ I+ K+PE HRVR+FG N T GIDD
Sbjct: 11 NKNVNWMETRGFW-------TFYVLVIGMSYMAMPFFVPANEVWTAVNVIHGLISFGIMHWIKGSPDDSNSMGDYRELTFYEQIDENHPWSGTKKFLMVVPTMIFMLASVTTDYDTQHLMINFPIW-FVLILAKLPEFHRVRIFGINSTVGIDD 156
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|325180966|emb|CCA15375.1| (ORM1like protein putative [Albugo laibachii Nc14]) HSP 1 Score: 118.627 bits (296), Expect = 4.888e-30 Identity = 65/152 (42.76%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 26 NKNVEWLRYPHFWWLYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDN-FSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
NKNV W+ FW Y+ + + V + V T +VVH +V F + HWIKGSPD+ S G++ LT +EQI++ PW+ TKK +V T + AS TDYD +L IN P++ F+ I+ K+PE HRVR+FG N T GIDD
Sbjct: 46 NKNVNWMETRGFWTFYVLVIGMLYMAMPFLVPA-----NDVWTAVNVVHGLVSFGIMHWIKGSPDDSMSMGDYRELTFYEQIDEDHPWSGTKKFLIVVPTVIFMLASVTTDYDTHHLMINFPIW-FVLILAKLPEFHRVRIFGINSTVGIDD 191
BLAST of EWM30225.1 vs. NCBI_GenBank
Match: gi|953502729|emb|CEG50444.1| (orm1-like protein [Plasmopara halstedii]) HSP 1 Score: 115.546 bits (288), Expect = 1.148e-29 Identity = 55/113 (48.67%), Postives = 76/113 (67.26%), Query Frame = 0
Query: 64 GRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
G LT +V+H +V F + HW+KGSPD+ S G++ LT +EQI+ G PWT TKK ++ T L AAS TDY+ +L +N P++ L I+ K+PE+ RVR+FG N T GIDD
Sbjct: 9 GDALTAVNVIHGVVSFGIMHWVKGSPDDNSMGDYRELTFYEQIDQGHPWTNTKKFLMMIPTFLFLAASVATDYNTRHLLVNFPIWATL-ILAKLPELDRVRIFGINSTVGIDD 120 The following BLAST results are available for this feature:
BLAST of EWM30225.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|