EWM27507.1, cds3165 (CDS) Nannochloropsis gaditana

Overview
NameEWM27507.1
Unique Namecds3165
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:915559..915733 -
Alignment locationCM002460.1:914800..915422 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27507.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100948g2.181.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:915559..915733 -
CM002460.1supercontigCM002460.1:914800..915422 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029059AB_hydrolase_5
IPR029058AB_hydrolase
Homology
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|585109772|gb|EWM27507.1| (hypothetical protein Naga_100948g2 [Nannochloropsis gaditana])

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGGGHRGLHGSVY 265
            MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGGGHRGLHGSVY
Sbjct:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGGGHRGLHGSVY 265          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|553179302|ref|XP_005852680.1| (hypothetical protein NGA_0105702, partial [Nannochloropsis gaditana CCMP526] >gi|422295850|gb|EKU23149.1| hypothetical protein NGA_0105702, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 447.588 bits (1150), Expect = 2.541e-158
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARP 217
            MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARP
Sbjct:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARP 217          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|299469777|emb|CBN76631.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 316.62 bits (810), Expect = 6.191e-106
Identity = 147/253 (58.10%), Postives = 193/253 (76.28%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGE 253
            MGG IS+LVFQPP   + +++ K+  L T   +RIP F+ +RS+ IT+L SHGNAEDLG+IY+ F+DFSRQLNVNV+AYEYSGYG++ G+ SE NCYADI AA+ YL   KK  P ++VL GRS+GSGP+C LA+ LA +G  +GGVMLQSP+ S  RV   + R+T  GDMFPN+DRVK + CP+F+IHGTRDE+VPF HGQ+LFL TP +WRA+P WV+G GHN++E  LR++GT F  + +FL +W   +
Sbjct:    1 MGGTISTLVFQPPPA-TFLHNKKHFWLQTRNQHRIPVFHVERSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAQELAAAGVELGGVMLQSPLASAFRVAF-NFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWVRND 251          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|1072230782|gb|OEU15515.1| (alpha/beta-hydrolase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 303.138 bits (775), Expect = 2.667e-100
Identity = 140/256 (54.69%), Postives = 194/256 (75.78%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGG 255
            MG  ISSL+FQPP   ++++ +++  L T+ G+RIPAF+ +R +A +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG++ G+P E NCYADIDAA++YL++++++ P ++VL GRS+GSGPSC+LA++ A  G  VGGV+LQSP+LS  RV   D R+T  GD FPN+D    ++CP+F++HGT+DE+VPF HG+DLF+A P QWRA+P WVEG GHN++E  LR  GT+   V+EFL    S   G
Sbjct:    1 MGDAISSLLFQPPPP-TYLHPSRHFWLNTATGSRIPAFFIERPNAQVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSNGAPCEENCYADIDAAYQYLLDVRRLQPEQIVLYGRSLGSGPSCFLAQKSAKEGKSVGGVILQSPLLSAYRVAF-DFRFTMIGDKFPNIDYAPNIKCPVFIVHGTQDEVVPFWHGEDLFMALPQQWRAKPFWVEGAGHNNIEALLRPTGTFVDKVVEFLDLHISARRG 254          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|219121639|ref|XP_002181170.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407156|gb|EEC47093.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 293.893 bits (751), Expect = 1.347e-96
Identity = 136/247 (55.06%), Postives = 187/247 (75.71%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFL 246
            MG  ISSL+FQPP   + ++ +++  L TS G+RIPAF+ +R +A +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG++ G PSE  CY DI+AA++YL E++++ P ++VL GRS+GSGPSCYLA + A  G  VGGV+LQSP+LS  RV   + R+T  GD FPN+D   ++ CP+F++HGT+DE+VPF HGQDLFLA   +WRA+P WV+G GHN++E  LR  GT+ + ++EFL
Sbjct:    1 MGDAISSLLFQPPPP-TFLHPSRHFWLNTSHGSRIPAFFIERPNASVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSNGHPSEEQCYQDIEAAYRYLTEVRRLQPEQVVLYGRSLGSGPSCYLASKTAKEGRSVGGVILQSPLLSAYRVAF-NFRFTMVGDKFPNIDFASKIACPVFIVHGTQDEVVPFWHGQDLFLALKQEWRAKPFWVDGAGHNNIEAMLRSTGTFVAKLMEFL 245          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|1210519834|dbj|GAX21263.1| (hypothetical protein FisN_1Lh092 [Fistulifera solaris])

HSP 1 Score: 291.197 bits (744), Expect = 1.317e-95
Identity = 139/256 (54.30%), Postives = 186/256 (72.66%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGG 255
            MG  ISSL+FQPP+  ++++ +++  L    G+ IPAF+ +R SA +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG+A+G PSE +CY DI+AA++YLV+++ + P ++VL GRS+GSGPSCYLA + A  G  VGG++LQSP+LS  RV   D R+T  GD FPNVD    +  P+F+IHGT+DE+VPF HG++LFLA P QWRARP WVEG GHN++E  LR  G +   + EFL    S   G
Sbjct:    1 MGDAISSLLFQPPAP-TYLHPSRHFWLTNEDGSSIPAFFIERPSASVTILFSHGNAEDLGMIYDWFSDLARVLRVNIMAYDYTGYGKASGVPSEQSCYKDIEAAYRYLVDVRHIQPEQIVLYGRSLGSGPSCYLARKTAQQGRSVGGIILQSPLLSAYRVAF-DFRFTMMGDRFPNVDYAPDIATPVFIIHGTQDEVVPFWHGEELFLAVPQQWRARPFWVEGAGHNNIEALLRSTGLFVHKLSEFLDLHVSARRG 254          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|1210529021|dbj|GAX12167.1| (hypothetical protein FisN_1Hh092 [Fistulifera solaris])

HSP 1 Score: 289.271 bits (739), Expect = 6.004e-95
Identity = 137/256 (53.52%), Postives = 186/256 (72.66%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGG 255
            MG  ISSL+FQPP+  ++++ +++  L    G+ IPAF+ +R +A +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG+A+G PSE +CY DI+AA++YL++++ + P ++VL GRS+GSGPSCYLA + A  G  VGG++LQSP+LS  RV   D R+T  GD FPNVD    +  P+F+IHGT+DE+VPF HG++LFLA P QWRARP WVEG GHN++E  LR  G +   + EFL    S   G
Sbjct:    1 MGDAISSLLFQPPAP-TYLHPSRHFWLTNEDGSSIPAFFIERPNASVTILFSHGNAEDLGMIYDWFSDLARVLRVNIMAYDYTGYGKASGVPSEQSCYKDIEAAYRYLIDVRHIQPEQIVLYGRSLGSGPSCYLARKTAQQGRSVGGIILQSPLLSAYRVAF-DFRFTMMGDRFPNVDYAPDIATPVFIIHGTQDEVVPFWHGEELFLAVPQQWRARPFWVEGAGHNNIEALLRSTGLFVHKLSEFLDLHVSARRG 254          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|673038122|ref|XP_008873022.1| (hypothetical protein H310_08886 [Aphanomyces invadans] >gi|574471139|gb|ETV98147.1| hypothetical protein H310_08886 [Aphanomyces invadans])

HSP 1 Score: 265.774 bits (678), Expect = 1.609e-85
Identity = 129/248 (52.02%), Postives = 179/248 (72.18%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYF-DRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEG-TYFSCVLEFL 246
            MG  IS LVFQPP + ++ +  +Y +L TS  NRI  FY  +  A  T+L SHGNAEDLGM+Y+ F + SR++NVNVMAY+Y+GYG + G PSE   Y+D++AAF YLV++KK  PSR++L GRS+G+GPSCYLA + +    PVGGV+LQSP+LSI RV     R++  GDMF N+D V  +E PI +IHGTRDE++PF HG++LF+A    WR+ PLWV+  GHN++E  L  +G ++F+ + +F+
Sbjct:    1 MGAMISQLVFQPP-RPTYTSCRQYTMLATSLHNRIATFYIKNEGAKYTLLFSHGNAEDLGMVYEWFREVSRRINVNVMAYDYTGYGISLGVPSEEAVYSDVEAAFAYLVDVKKTPPSRIILYGRSLGTGPSCYLAAKQSRLKAPVGGVILQSPLLSIYRVAF-QFRFSLLGDMFCNIDHVGNIESPITIIHGTRDEVIPFWHGEELFVACQAAWRSLPLWVQDAGHNNIEAFLGMQGDSFFAHLRDFV 246          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|397579591|gb|EJK51266.1| (hypothetical protein THAOC_29579 [Thalassiosira oceanica])

HSP 1 Score: 275.018 bits (702), Expect = 2.124e-84
Identity = 131/254 (51.57%), Postives = 183/254 (72.05%), Query Frame = 0
Query:    1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGE 253
            MG  ISSL+FQPP+  ++++ +++  L T  G RIPAF+ +R  A +T+L SHGNAEDLGMIYD F D +R L  N+MAY+Y+GYG++ G+P+E +CY+DI+AA+ YL+  +K++P ++VL GRS+GSGPSCYLA + A  G  V GV+LQSP+LS  RV   + R+T  GD FPNVD   ++  P+F++HGT+DE+VPF HGQ+LFLA    WR+ P WVEG GHN++E  LR  G +   V + + E+ S E
Sbjct:    1 MGDMISSLLFQPPTP-TYLHPSRHFWLNTDSGGRIPAFFIERPGASVTILFSHGNAEDLGMIYDWFSDLARVLRCNIMAYDYTGYGKSQGTPNEHSCYSDIEAAYNYLLHKRKLLPEQIVLYGRSLGSGPSCYLAAKTAREGRSVAGVILQSPLLSAYRVAF-NFRFTCIGDKFPNVDYADQIRAPVFIVHGTQDEVVPFWHGQELFLALEQLWRSEPFWVEGAGHNNIEALLRPTGAF---VDKLVDEYDSDE 249          
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|224004950|ref|XP_002296126.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|209586158|gb|ACI64843.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 259.225 bits (661), Expect = 4.395e-84
Identity = 120/204 (58.82%), Postives = 154/204 (75.49%), Query Frame = 0
Query:   27 LPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLE 229
            L T  G+RIPAFY +R  A +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG++ G P E +CYADI+AA++YL+ ++ V P ++VL GRS+GSGPSCYLA + A  G  V GV+LQSP+LS  RV   + R+T  GD FPNVD    + CP+F++HGT+DE+VPF HGQDLFLA    WRA+P WVEG GHN++E
Sbjct:    1 LNTEAGSRIPAFYIERPHAQVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSQGMPHEHSCYADIEAAYRYLLTVRNVKPEQIVLYGRSLGSGPSCYLASKTAQEGRSVAGVILQSPLLSAYRVAF-NFRFTCVGDKFPNVDYAPHIRCPVFIVHGTQDEVVPFWHGQDLFLALEQPWRAKPFWVEGAGHNNIE 203          
The following BLAST results are available for this feature:
BLAST of EWM27507.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109772|gb|EWM27507.1|0.000e+0100.00hypothetical protein Naga_100948g2 [Nannochloropsi... [more]
gi|553179302|ref|XP_005852680.1|2.541e-158100.00hypothetical protein NGA_0105702, partial [Nannoch... [more]
gi|299469777|emb|CBN76631.1|6.191e-10658.10conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072230782|gb|OEU15515.1|2.667e-10054.69alpha/beta-hydrolase [Fragilariopsis cylindrus CCM... [more]
gi|219121639|ref|XP_002181170.1|1.347e-9655.06predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210519834|dbj|GAX21263.1|1.317e-9554.30hypothetical protein FisN_1Lh092 [Fistulifera sola... [more]
gi|1210529021|dbj|GAX12167.1|6.004e-9553.52hypothetical protein FisN_1Hh092 [Fistulifera sola... [more]
gi|673038122|ref|XP_008873022.1|1.609e-8552.02hypothetical protein H310_08886 [Aphanomyces invad... [more]
gi|397579591|gb|EJK51266.1|2.124e-8451.57hypothetical protein THAOC_29579 [Thalassiosira oc... [more]
gi|224004950|ref|XP_002296126.1|4.395e-8458.82predicted protein, partial [Thalassiosira pseudona... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3173rna3173Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications