EWM27507.1, cds3165 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|585109772|gb|EWM27507.1| (hypothetical protein Naga_100948g2 [Nannochloropsis gaditana]) HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGGGHRGLHGSVY 265
MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGGGHRGLHGSVY
Sbjct: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGGGHRGLHGSVY 265
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|553179302|ref|XP_005852680.1| (hypothetical protein NGA_0105702, partial [Nannochloropsis gaditana CCMP526] >gi|422295850|gb|EKU23149.1| hypothetical protein NGA_0105702, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 447.588 bits (1150), Expect = 2.541e-158 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARP 217
MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARP
Sbjct: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARP 217
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|299469777|emb|CBN76631.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 316.62 bits (810), Expect = 6.191e-106 Identity = 147/253 (58.10%), Postives = 193/253 (76.28%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGE 253
MGG IS+LVFQPP + +++ K+ L T +RIP F+ +RS+ IT+L SHGNAEDLG+IY+ F+DFSRQLNVNV+AYEYSGYG++ G+ SE NCYADI AA+ YL KK P ++VL GRS+GSGP+C LA+ LA +G +GGVMLQSP+ S RV + R+T GDMFPN+DRVK + CP+F+IHGTRDE+VPF HGQ+LFL TP +WRA+P WV+G GHN++E LR++GT F + +FL +W +
Sbjct: 1 MGGTISTLVFQPPPA-TFLHNKKHFWLQTRNQHRIPVFHVERSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAQELAAAGVELGGVMLQSPLASAFRVAF-NFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWVRND 251
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|1072230782|gb|OEU15515.1| (alpha/beta-hydrolase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 303.138 bits (775), Expect = 2.667e-100 Identity = 140/256 (54.69%), Postives = 194/256 (75.78%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGG 255
MG ISSL+FQPP ++++ +++ L T+ G+RIPAF+ +R +A +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG++ G+P E NCYADIDAA++YL++++++ P ++VL GRS+GSGPSC+LA++ A G VGGV+LQSP+LS RV D R+T GD FPN+D ++CP+F++HGT+DE+VPF HG+DLF+A P QWRA+P WVEG GHN++E LR GT+ V+EFL S G
Sbjct: 1 MGDAISSLLFQPPPP-TYLHPSRHFWLNTATGSRIPAFFIERPNAQVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSNGAPCEENCYADIDAAYQYLLDVRRLQPEQIVLYGRSLGSGPSCFLAQKSAKEGKSVGGVILQSPLLSAYRVAF-DFRFTMIGDKFPNIDYAPNIKCPVFIVHGTQDEVVPFWHGEDLFMALPQQWRAKPFWVEGAGHNNIEALLRPTGTFVDKVVEFLDLHISARRG 254
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|219121639|ref|XP_002181170.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407156|gb|EEC47093.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 293.893 bits (751), Expect = 1.347e-96 Identity = 136/247 (55.06%), Postives = 187/247 (75.71%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFL 246
MG ISSL+FQPP + ++ +++ L TS G+RIPAF+ +R +A +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG++ G PSE CY DI+AA++YL E++++ P ++VL GRS+GSGPSCYLA + A G VGGV+LQSP+LS RV + R+T GD FPN+D ++ CP+F++HGT+DE+VPF HGQDLFLA +WRA+P WV+G GHN++E LR GT+ + ++EFL
Sbjct: 1 MGDAISSLLFQPPPP-TFLHPSRHFWLNTSHGSRIPAFFIERPNASVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSNGHPSEEQCYQDIEAAYRYLTEVRRLQPEQVVLYGRSLGSGPSCYLASKTAKEGRSVGGVILQSPLLSAYRVAF-NFRFTMVGDKFPNIDFASKIACPVFIVHGTQDEVVPFWHGQDLFLALKQEWRAKPFWVDGAGHNNIEAMLRSTGTFVAKLMEFL 245
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|1210519834|dbj|GAX21263.1| (hypothetical protein FisN_1Lh092 [Fistulifera solaris]) HSP 1 Score: 291.197 bits (744), Expect = 1.317e-95 Identity = 139/256 (54.30%), Postives = 186/256 (72.66%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGG 255
MG ISSL+FQPP+ ++++ +++ L G+ IPAF+ +R SA +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG+A+G PSE +CY DI+AA++YLV+++ + P ++VL GRS+GSGPSCYLA + A G VGG++LQSP+LS RV D R+T GD FPNVD + P+F+IHGT+DE+VPF HG++LFLA P QWRARP WVEG GHN++E LR G + + EFL S G
Sbjct: 1 MGDAISSLLFQPPAP-TYLHPSRHFWLTNEDGSSIPAFFIERPSASVTILFSHGNAEDLGMIYDWFSDLARVLRVNIMAYDYTGYGKASGVPSEQSCYKDIEAAYRYLVDVRHIQPEQIVLYGRSLGSGPSCYLARKTAQQGRSVGGIILQSPLLSAYRVAF-DFRFTMMGDRFPNVDYAPDIATPVFIIHGTQDEVVPFWHGEELFLAVPQQWRARPFWVEGAGHNNIEALLRSTGLFVHKLSEFLDLHVSARRG 254
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|1210529021|dbj|GAX12167.1| (hypothetical protein FisN_1Hh092 [Fistulifera solaris]) HSP 1 Score: 289.271 bits (739), Expect = 6.004e-95 Identity = 137/256 (53.52%), Postives = 186/256 (72.66%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGEGG 255
MG ISSL+FQPP+ ++++ +++ L G+ IPAF+ +R +A +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG+A+G PSE +CY DI+AA++YL++++ + P ++VL GRS+GSGPSCYLA + A G VGG++LQSP+LS RV D R+T GD FPNVD + P+F+IHGT+DE+VPF HG++LFLA P QWRARP WVEG GHN++E LR G + + EFL S G
Sbjct: 1 MGDAISSLLFQPPAP-TYLHPSRHFWLTNEDGSSIPAFFIERPNASVTILFSHGNAEDLGMIYDWFSDLARVLRVNIMAYDYTGYGKASGVPSEQSCYKDIEAAYRYLIDVRHIQPEQIVLYGRSLGSGPSCYLARKTAQQGRSVGGIILQSPLLSAYRVAF-DFRFTMMGDRFPNVDYAPDIATPVFIIHGTQDEVVPFWHGEELFLAVPQQWRARPFWVEGAGHNNIEALLRSTGLFVHKLSEFLDLHVSARRG 254
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|673038122|ref|XP_008873022.1| (hypothetical protein H310_08886 [Aphanomyces invadans] >gi|574471139|gb|ETV98147.1| hypothetical protein H310_08886 [Aphanomyces invadans]) HSP 1 Score: 265.774 bits (678), Expect = 1.609e-85 Identity = 129/248 (52.02%), Postives = 179/248 (72.18%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYF-DRSAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEG-TYFSCVLEFL 246
MG IS LVFQPP + ++ + +Y +L TS NRI FY + A T+L SHGNAEDLGM+Y+ F + SR++NVNVMAY+Y+GYG + G PSE Y+D++AAF YLV++KK PSR++L GRS+G+GPSCYLA + + PVGGV+LQSP+LSI RV R++ GDMF N+D V +E PI +IHGTRDE++PF HG++LF+A WR+ PLWV+ GHN++E L +G ++F+ + +F+
Sbjct: 1 MGAMISQLVFQPP-RPTYTSCRQYTMLATSLHNRIATFYIKNEGAKYTLLFSHGNAEDLGMVYEWFREVSRRINVNVMAYDYTGYGISLGVPSEEAVYSDVEAAFAYLVDVKKTPPSRIILYGRSLGTGPSCYLAAKQSRLKAPVGGVILQSPLLSIYRVAF-QFRFSLLGDMFCNIDHVGNIESPITIIHGTRDEVIPFWHGEELFVACQAAWRSLPLWVQDAGHNNIEAFLGMQGDSFFAHLRDFV 246
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|397579591|gb|EJK51266.1| (hypothetical protein THAOC_29579 [Thalassiosira oceanica]) HSP 1 Score: 275.018 bits (702), Expect = 2.124e-84 Identity = 131/254 (51.57%), Postives = 183/254 (72.05%), Query Frame = 0
Query: 1 MGGRISSLVFQPPSKRSHINSTKYIILPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLEGRLRQEGTYFSCVLEFLREWCSGE 253
MG ISSL+FQPP+ ++++ +++ L T G RIPAF+ +R A +T+L SHGNAEDLGMIYD F D +R L N+MAY+Y+GYG++ G+P+E +CY+DI+AA+ YL+ +K++P ++VL GRS+GSGPSCYLA + A G V GV+LQSP+LS RV + R+T GD FPNVD ++ P+F++HGT+DE+VPF HGQ+LFLA WR+ P WVEG GHN++E LR G + V + + E+ S E
Sbjct: 1 MGDMISSLLFQPPTP-TYLHPSRHFWLNTDSGGRIPAFFIERPGASVTILFSHGNAEDLGMIYDWFSDLARVLRCNIMAYDYTGYGKSQGTPNEHSCYSDIEAAYNYLLHKRKLLPEQIVLYGRSLGSGPSCYLAAKTAREGRSVAGVILQSPLLSAYRVAF-NFRFTCIGDKFPNVDYADQIRAPVFIVHGTQDEVVPFWHGQELFLALEQLWRSEPFWVEGAGHNNIEALLRPTGAF---VDKLVDEYDSDE 249
BLAST of EWM27507.1 vs. NCBI_GenBank
Match: gi|224004950|ref|XP_002296126.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|209586158|gb|ACI64843.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 259.225 bits (661), Expect = 4.395e-84 Identity = 120/204 (58.82%), Postives = 154/204 (75.49%), Query Frame = 0
Query: 27 LPTSKGNRIPAFYFDR-SAHITVLVSHGNAEDLGMIYDQFFDFSRQLNVNVMAYEYSGYGRATGSPSESNCYADIDAAFKYLVEIKKVVPSRLVLLGRSIGSGPSCYLAERLALSGTPVGGVMLQSPVLSILRVVLPDLRWTWWGDMFPNVDRVKRMECPIFVIHGTRDEIVPFRHGQDLFLATPVQWRARPLWVEGGGHNDLE 229
L T G+RIPAFY +R A +T+L SHGNAEDLGMIYD F D +R L VN+MAY+Y+GYG++ G P E +CYADI+AA++YL+ ++ V P ++VL GRS+GSGPSCYLA + A G V GV+LQSP+LS RV + R+T GD FPNVD + CP+F++HGT+DE+VPF HGQDLFLA WRA+P WVEG GHN++E
Sbjct: 1 LNTEAGSRIPAFYIERPHAQVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSQGMPHEHSCYADIEAAYRYLLTVRNVKPEQIVLYGRSLGSGPSCYLASKTAQEGRSVAGVILQSPLLSAYRVAF-NFRFTCVGDKFPNVDYAPHIRCPVFIVHGTQDEVVPFWHGQDLFLALEQPWRAKPFWVEGAGHNNIE 203 The following BLAST results are available for this feature:
BLAST of EWM27507.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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