EWM27519.1, cds3156 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|585109785|gb|EWM27519.1| (hypothetical protein Naga_100101g9 [Nannochloropsis gaditana]) HSP 1 Score: 843.573 bits (2178), Expect = 0.000e+0 Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0 Query: 1 MTPNSAFQNLRDTATNILSAQKDMQASERTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCPMEDDGGDEQAHAAAVARLLENPDNVAPLTAGTMVAMDELAVRMAEAATEGEVEGSHASSTEKAVVPLDLSYFLDEMWSKQESERRRQQTEPAGNGEQSCAATEPATGPLHAEMAPAGPSFVPPRGQTVM 414 MTPNSAFQNLRDTATNILSAQKDMQASERTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCPMEDDGGDEQAHAAAVARLLENPDNVAPLTAGTMVAMDELAVRMAEAATEGEVEGSHASSTEKAVVPLDLSYFLDEMWSKQESERRRQQTEPAGNGEQSCAATEPATGPLHAEMAPAGPSFVPPRGQTVM Sbjct: 1 MTPNSAFQNLRDTATNILSAQKDMQASERTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCPMEDDGGDEQAHAAAVARLLENPDNVAPLTAGTMVAMDELAVRMAEAATEGEVEGSHASSTEKAVVPLDLSYFLDEMWSKQESERRRQQTEPAGNGEQSCAATEPATGPLHAEMAPAGPSFVPPRGQTVM 414
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|553191035|ref|XP_005855311.1| (hypothetical protein NGA_2071820, partial [Nannochloropsis gaditana CCMP526] >gi|553193013|ref|XP_005855692.1| hypothetical protein NGA_2071810, partial [Nannochloropsis gaditana CCMP526] >gi|422293368|gb|EKU20668.1| hypothetical protein NGA_2071810, partial [Nannochloropsis gaditana CCMP526] >gi|422293748|gb|EKU21048.1| hypothetical protein NGA_2071820, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 248.825 bits (634), Expect = 5.103e-79 Identity = 122/125 (97.60%), Postives = 125/125 (100.00%), Query Frame = 0 Query: 1 MTPNSAFQNLRDTATNILSAQKDMQASERTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFL 125 MTPNSAFQNLRDTAT+ILSAQKDMQASERTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHA+LSLLSFG+AYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFL Sbjct: 1 MTPNSAFQNLRDTATDILSAQKDMQASERTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHALLSLLSFGRAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFL 125
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|299471614|emb|CBN76836.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.775 bits (286), Expect = 8.006e-25 Identity = 82/264 (31.06%), Postives = 126/264 (47.73%), Query Frame = 0 Query: 26 ASERTSIVRVDHEAVGRL--AAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHC--RKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCP 285 A E + R++ +A+ + L + + +RV LPLKF E+NFH++L+LLSFG ++E + + +G + D FGLIG HLS+ L A ++ V+ F I E+ P ++P + V+RPG L L + +N G L G D+A FIL + R + P V LV +L A P + T G K + +LAGEL R+ + + F D + A +IT L + G+L P Sbjct: 28 ACEEQQVARINDDAMAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGSHEPELLRLTG---SNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPS-TIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSD--PGVEGLVRSLSGALPG-------FQDTETVNGLDVLMLKNAQVLAGELSSRMGKAVEDLRFDDSDKLTAVADADVITALTTLGILEP 278
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|1026952333|ref|XP_016611710.1| (hypothetical protein SPPG_01142 [Spizellomyces punctatus DAOM BR117] >gi|907098297|gb|KND03671.1| hypothetical protein SPPG_01142 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 99.3673 bits (246), Expect = 1.694e-19 Identity = 76/257 (29.57%), Postives = 118/257 (45.91%), Query Frame = 0 Query: 33 VRVDHEAVGRLAAQFSLSEIRD-KVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMR----GEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSF-AEFDFQDFSRAPGYATPALITFLVSRGVL 283 + VD AV ++ S+ R+ + +PLKF ELN A++ LL+FG + G A DT+ FG++ LH+S D+ A ++ +T +VA+ F I +VPH+++P E P PL ++ MN GA L++ +LAHF+L + G P+ LV AL + PS C G + ++ ++A LY R + A F F D S A L + + GVL Sbjct: 37 ITVDEIAVQDFISRIDPSKWREAQKEATRMPLKFDTLEQELNIIALIDLLTFGSGWRSQLKEAVG---RGAYDTLRFGVMSLHISSVDVSAKYMREITLGEVATLFNIPVTRDVPHETLPLTLTE-PHPLREFAQKITDVMNETGAILQQKDYRNLAHFLLDVTKPGANGSGYPSAENLVAALASTLPSMRDMG-RCNG----VDVYIFRRPQLMALNLYRYFRDADPARFQFSDMSMLTVLADDILPSLWIHLGVL 284
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|1173947627|gb|OQR95859.1| (hypothetical protein THRCLA_07508 [Thraustotheca clavata]) HSP 1 Score: 95.1301 bits (235), Expect = 4.257e-18 Identity = 83/280 (29.64%), Postives = 129/280 (46.07%), Query Frame = 0 Query: 11 RDTATNILS-----AQKDMQASERTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDF--ISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVL 283 RDT N+ + A + E+ V++ E + LA+ + + V PL F DELNF A+++LL+FG Y I++ G A +T+ FG IGL++S+ L A FL ++ VASYF + P E S P I + +PGPL L + + +N G L +LG D F++A ++ PT A + + A +TF A GS + KK+ LY R F F+D ++ ++ L L + G+L Sbjct: 3 RDTQDNMCTPAHVRASCAVFMEEKAKSVKISQEKIDSLASTVNPEQFAALSDPVRYPLAFRSLSDELNFIALVNLLNFGSGYRKPLHQITERG-----AHETMTFGAIGLYISEPRLDAKFLRGLSLESVASYFSL-PTERDEQLS-PGIYISKPGPLKPLAESIQKVLNESGQILLDLGFEDFGAFLIAKIKN--TPTTASDLVEIIA---TTFPAFHDVSGSVS-----FLKKAQCFVASLYRRFADEDEAFKFEDIAKLTAFSDSGLPCVLHAMGIL 265
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|669161874|ref|XP_008616499.1| (hypothetical protein SDRG_12214 [Saprolegnia diclina VS20] >gi|530731914|gb|EQC30156.1| hypothetical protein SDRG_12214 [Saprolegnia diclina VS20]) HSP 1 Score: 93.5893 bits (231), Expect = 1.521e-17 Identity = 86/311 (27.65%), Postives = 136/311 (43.73%), Query Frame = 0 Query: 33 VRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVL--CPMEDD-----------GGDEQAHAAAVARLLENPDNVAPLTAGTMVAMDELAVRMAE 330 V+V E + A+ +++ + V PL F DELNF ++++L+FG Y + A +T+ FG IGL +S+ L A FL ++ VASYF + P E S P I + +PGPL L + + +N G L ELG D F+LA + ++ + ++LV L FP+ F P + KK+ LY R + F F+D + ++ L L + G+L P DD G + + AAAV + + T M+A+D R+ + Sbjct: 41 VKVLDEKIATFASTIDMAQFAELSGAVRYPLSFKSISDELNFMGLVNVLNFGSGYRKPL---HDITTRGAHETMTFGAIGLFISEPRLDAKFLRGLSLESVASYFSL-PTERDEQLS-PGIYIAKPGPLKPLAESIRKVLNDTGRILLELGFADFGAFLLAHL--QKGSSASQLVELLATTFPA-FHDVSP------DGSVVVLKKAQCFVASLYRRFQEEDPMFRFEDIASLTAFSDNVLPCVLHAMGILEYSPELDDMIEKGTLLPHGGVETELRAAAVVAC----EKIVAATGLEMIALDSFLWRLGK 333
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|813186185|ref|XP_012207264.1| (hypothetical protein SPRG_12230, partial [Saprolegnia parasitica CBS 223.65] >gi|641527752|gb|KDO22021.1| hypothetical protein SPRG_12230, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 91.2781 bits (225), Expect = 8.594e-17 Identity = 87/311 (27.97%), Postives = 136/311 (43.73%), Query Frame = 0 Query: 33 VRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVL---CPMED----------DGGDEQAHAAAVARLLENPDNVAPLTAGTMVAMDELAVRMAE 330 V+V E + A+ +++ + V PL F DELNF ++++L+FG Y + A +T+ FG IGL +S+ L A FL ++ VASYF + P E S P I + +PGPL L + + +N G L ELG D F+LA + ++ + ++LV L FP+ F P GS KK+ LY R A F F D + ++ L L + G+L ++D G + + AAAV + + T M+A+D R+ + Sbjct: 28 VKVLDEKIATFASTIDMAQFAELSGAVRYPLSFKSVADELNFMGLVNVLNFGSGYRQPL---HAITDRGAHETMTFGAIGLFISEPRLDAKFLRGLSLESVASYFSL-PTERDEQLS-PGIYIAKPGPLKPLAESIRKVLNDTGRILLELGFADFGAFLLAHV--QKGISASQLVELLATTFPA-FHDVSP-DGSVV-----LLKKAQCFVASLYRRFHEEDASFCFDDIASLTAFSDNVLPCVLHAMGILEYTSELDDMIEKGTLLPHGGVETELRAAAVVAC----EKIVAATGLDMIALDSFLWRLGK 320
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|675186453|ref|XP_008902111.1| (hypothetical protein PPTG_09020 [Phytophthora parasitica INRA-310] >gi|567966429|gb|ETK91876.1| hypothetical protein L915_04637 [Phytophthora parasitica] >gi|568097353|gb|ETN12095.1| hypothetical protein PPTG_09020 [Phytophthora parasitica INRA-310] >gi|570992083|gb|ETP49681.1| hypothetical protein F442_04828 [Phytophthora parasitica P10297]) HSP 1 Score: 91.2781 bits (225), Expect = 1.139e-16 Identity = 84/312 (26.92%), Postives = 132/312 (42.31%), Query Frame = 0 Query: 26 ASERTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEV----------PTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCPMEDDGGDEQAHAAAVARLLENP--DNVAPLTAGTMVAMDELA 325 + +S VR++ + V Q E + PL F DE+NF + +LL+FG + D + A DT++FGLIG+++S L A F+ +T VA+YF I P+E + I + +PGPL L L +N G +L +L D F+LA + E P+ LV + FP F G + + K++ + ++ R + S + F D + ++ L L + GVL E D G E A + R E P L A +VA D++ Sbjct: 22 VAHESSCVRINADKVRTFEEQLDAKEFEQLAEPMNFPLNFRSQQDEINFLTLYALLNFGSGFRKDLHKYTD---RGAHDTIVFGLIGMYISVPKLDAQFMKNLTIDLVANYFSI-PLEK-DEEVSTGIYMAKPGPLKPLAVMLQKILNESGQKLIDLKMEDFGAFVLANLAPETSADQEEKESVRPSAVYLVDQFVSTFPG-FDDHYEIQGEKV----YLLKRAQLAVACIHRRFKDSEPKLTFTDINELTAFSDNVLPCVLHALGVL---EYDAGLE----ARINRGEELPAGKEECELRAAAVVACDQIV 316
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|630212316|ref|XP_007855459.1| (hypothetical protein Moror_11386 [Moniliophthora roreri MCA 2997] >gi|554902734|gb|ESK85239.1| hypothetical protein Moror_11386 [Moniliophthora roreri MCA 2997]) HSP 1 Score: 91.2781 bits (225), Expect = 1.380e-16 Identity = 68/232 (29.31%), Postives = 110/232 (47.41%), Query Frame = 0 Query: 59 VGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTD-LRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRV-ERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVP-----TVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVL 283 + LPL F PL ELN ++LSLL+FG Y QSG A D + + G+++S D L A + +T+S +A + PH S+P + V GP+ LV+ + +++N G L + G PDL F+L A+ + + ++ L +AFP+ S +C KK+L L L +R + A+F + S P ++ L T L+ G++ Sbjct: 48 LALPLNFSSPLAELNLVSILSLLNFGSGYRLPLHQQSG---RGAWDNIRMLVFGMYISSEDLLSAKGIKDITQSKIAEIMRVSIHTETPHSSIPGVTVGTLGGPMHNLVNLITSTLNETGTILVQGGYPDLGSFVLEALNAAKAKESDEAKIDCILHRLVSAFPA-----FRDQSSINNHPIYCFKKALFLIHAL--TIRFTTAQFPIPNTSTIPVFSDNVLPTLLIHLGII 269
BLAST of EWM27519.1 vs. NCBI_GenBank
Match: gi|1173944656|gb|OQR93367.1| (hypothetical protein ACHHYP_02617 [Achlya hypogyna]) HSP 1 Score: 90.5077 bits (223), Expect = 1.588e-16 Identity = 85/296 (28.72%), Postives = 125/296 (42.23%), Query Frame = 0 Query: 29 RTSIVRVDHEAVGRLAAQFSLSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCPMEDDGGDEQAHAAAVARLLENPDNVAPLTAGTMVAMDEL 324 +T+ V++D V A +++ V PL F DELNF M + L+ + G + + A +T+ FG IGL +S+ L A FL ++ VASYF + P E S P I + +PGPL L + + +N G + E G DL F+ A ++G T A LV L FP+ F P + KK+ LY R F F+D + ++ L L + G+L DE A A LL L A +VA D++ Sbjct: 24 QTTQVKIDEVKVASFADDLDMTQFNALSEPVRYPLSFRSLADELNFMGMAASLTAPLMHTGYRVPLHAITDRGAHETMTFGAIGLFISEPRLDAKFLRGLSLESVASYFSL-PTERDEQLS-PGIYIAKPGPLKPLAEAIQQVLNDAGRIVLERGFDDLGAFLTAQIKGATPTTAAALVETLATTFPA-FRDVSP------DGSVVLLKKAQCFVASLYRRFHAEDPAFAFEDIANLTAFSDNVLPCVLRAMGIL-----QYTDELADQIASNTLLPKGGVEVELRAAAVVACDKI 305 The following BLAST results are available for this feature:
BLAST of EWM27519.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|