EWM27527.1, cds3153 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|585109793|gb|EWM27527.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 1456.04 bits (3768), Expect = 0.000e+0 Identity = 706/706 (100.00%), Postives = 706/706 (100.00%), Query Frame = 0 Query: 1 MMKTLVSCAVLLLQPFAYSFFPAARQHYPPHRDLHRREPCLSFSAFIDDSLKASEHPSDELPPKSYFFDAPKAVRLAAFSFAAYGKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFFLYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDVPPAQGILEWSGILDIESAVPNTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGPDDRRLVHAGFRRAFRSIRGGVVQALQFIAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQLPISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGKSLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAFGAAMKMDSARKEHWDEDQR 706 MMKTLVSCAVLLLQPFAYSFFPAARQHYPPHRDLHRREPCLSFSAFIDDSLKASEHPSDELPPKSYFFDAPKAVRLAAFSFAAYGKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFFLYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDVPPAQGILEWSGILDIESAVPNTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGPDDRRLVHAGFRRAFRSIRGGVVQALQFIAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQLPISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGKSLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAFGAAMKMDSARKEHWDEDQR Sbjct: 1 MMKTLVSCAVLLLQPFAYSFFPAARQHYPPHRDLHRREPCLSFSAFIDDSLKASEHPSDELPPKSYFFDAPKAVRLAAFSFAAYGKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFFLYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDVPPAQGILEWSGILDIESAVPNTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGPDDRRLVHAGFRRAFRSIRGGVVQALQFIAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQLPISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGKSLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAFGAAMKMDSARKEHWDEDQR 706
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|553193009|ref|XP_005855691.1| (hypothetical protein NGA_2011810, partial [Nannochloropsis gaditana CCMP526] >gi|422293367|gb|EKU20667.1| hypothetical protein NGA_2011810, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1231.85 bits (3186), Expect = 0.000e+0 Identity = 599/603 (99.34%), Postives = 600/603 (99.50%), Query Frame = 0 Query: 104 QSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFFLYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDVPPAQGILEWSGILDIESAVPNTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGPDDRRLVHAGFRRAFRSIRGGVVQALQFIAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQLPISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGKSLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAFGAAMKMDSARKEHWDEDQR 706 QSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFFLYVEDPTTASL LTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDD PPAQGILEWSGILDIESAV NTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGPDDRRLVHAGFRRAFRSIRGGVVQALQFIAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLD+VARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQLPISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGKSLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAFGAAMKMDSARKEHWDEDQR Sbjct: 1 QSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFFLYVEDPTTASLKLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDAPPAQGILEWSGILDIESAVSNTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGPDDRRLVHAGFRRAFRSIRGGVVQALQFIAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDLVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQLPISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGKSLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAFGAAMKMDSARKEHWDEDQR 603
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|585103111|gb|EWM22561.1| (Lipase, class 3, partial [Nannochloropsis gaditana]) HSP 1 Score: 301.982 bits (772), Expect = 3.879e-91 Identity = 186/454 (40.97%), Postives = 259/454 (57.05%), Query Frame = 0 Query: 33 DLHRREPCLSFSAFIDDSLKASEHPSDELPPKSYFFDAPKAVRLAAFSFAAYGKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGS-GCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQR-FFLYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDVPPAQGILE-WSGILDIESAVPNTKSSGTIEIELQLVPLDGNAVDKDDR-----NLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRV-GGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGP--DDRRLVHAGFRRAFRSIRGGVVQALQFIAP-DLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVN 474 D RR + SA +D S P+ S FD KA RL AFSF+ YG P+ +R+ R DGTD+GF SDD+V NF+ +L V I +AR+LP L+EK L S P V V ++ G+D+A+T + P + +LYVED A + V D L D ++G ++PL L + G E W ++D E A S G++E+ L+L+PL+G ++ + + PT K+V+E +DW+ L S++ GG G+G Y A FL+N ETDTQG IW + K KE++I FRGT++ WKDLLTD I Q+ LD +D R VHAGF RAFR+++ V AL F+ DL DGW +DVCGHSLGGALA L+A++L R P ++ GRL +Y +G+PRVGN AFC +YD +L + +FR+VN Sbjct: 49 DPGRRSFSIRMSAAVDKS------PTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATN-LVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCK---------DGAWEGWIDVMDSEGA-----SQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPT--KAVVE-LDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDL--DGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYGSPRVGNAAFCQDYDDKLGDASFRVVN 476
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|585113359|gb|EWM30663.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 282.337 bits (721), Expect = 3.812e-82 Identity = 179/496 (36.09%), Postives = 264/496 (53.23%), Query Frame = 0 Query: 57 PSDELPP-------KSYFFDAPKAVRLAAFSFAAYGKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFF----LYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDVPPAQGILE--WSGILDIESAVPNTKSSGTIEIELQLVPL----DGNAVDKDDRNLD-----------DPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQM-EWKDLLTDMAIYQEGLDGPDDRRLVHAGFRRAFRSIRGGVVQALQFIA---PDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAV-LMEYNHCGRTVLLTETEEGQFRVWVEGE 519 P+ E PP K FD KAV+ A+F+F+ YG P + W + GT LG + VR NF + L V +L+A++LP+E L + LSGS D Y + V + WG D T ++ P++ L VED +TA+L ++++D N L D V+G +P PP + W+G L ++ A N G +E+ ++ +P +G + + NL D D E+ ++ P+S +DWN + +++ + L +Y+ A F TNE TDTQGGIW+ KE+I+ FRGT++ +D++TD+ I Q L G D+RLVH GF AF SI G +L+ D GWT+D GHSLGGALA LMA+ + P L RLH+YSFGAPRVGN AFC+E+++ L FRIVN D+V RMP GR+ + +EY+H G VL+T+ ++++G+ Sbjct: 5 PTQERPPSKLSDLLKDAVFDVEKAVKTASFAFSVYGAPKINTWYNVQGGTRLGL-PQETVRRNFAARLRVTVLRAKDLPKESK-LADYILSGSMPDAYALLEVKSKWGYDQGRTITIPDSNAPEWTDPATATSELLVEDLSTATLEVSLRDENRLGKDSVLGQASIP------------PPEIPAMHSSWTGWLPLKQA-ENKLGKGKVELRVETLPAVRAGEGIELSESSANLGTSIPWTNDNGLDSDEEDAEA-------PRSTEADLDWNAMAAKLTNASLSLRKYRMAVFFTNESTDTQGGIWWRKSTKEVILVFRGTEITSLQDVMTDLNIVQTPL-GDGDKRLVHTGFWTAFNSIVDGAYHSLEMAVGKGEDWAKGGWTIDCSGHSLGGALASLMAHNIAHNYPELCRNNRLHMYSFGAPRVGNPAFCEEFNMLLGHALFRIVNKADVVPRMP---GRNNLGSIEYDHFGFCVLITDEALKSVSIYLDGQ 474
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|585103112|gb|EWM22562.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 264.618 bits (675), Expect = 3.293e-77 Identity = 171/428 (39.95%), Postives = 238/428 (55.61%), Query Frame = 0 Query: 33 DLHRREPCLSFSAFIDDSLKASEHPSDELPPKSYFFDAPKAVRLAAFSFAAYGKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGS-GCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQR-FFLYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDVPPAQGILE-WSGILDIESAVPNTKSSGTIEIELQLVPLDGNAVDKDDR-----NLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRV-GGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGP--DDRRLVHAGFRRAFRSIRGGVVQALQFIAP-DLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFG 448 D RR + SA +D S P+ S FD KA RL AFSF+ YG P+ +R+ R DGTD+GF SDD+V NF+ +L V I +AR+LP L+EK L S P V V ++ G+D+A+T + P + +LYVED A + V D L D ++G ++PL L + G E W ++D E A S G++E+ L+L+PL+G ++ + + PT K+V+E +DW+ L S++ GG G+G Y A FL+N ETDTQG IW + K KE++I FRGT++ WKDLLTD I Q+ LD +D R VHAGF RAFR+++ V AL F+ DL DGW +DVCGHSLGGALA L+A++L R P ++ GRL +Y +G Sbjct: 49 DPGRRSFSIRMSAAVDKS------PTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATN-LVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCK---------DGAWEGWIDVMDSEGA-----SQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPT--KAVVE-LDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDL--DGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG 450
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|674243473|gb|KFK36238.1| (hypothetical protein AALP_AA4G096300 [Arabis alpina]) HSP 1 Score: 142.51 bits (358), Expect = 1.485e-31 Identity = 112/350 (32.00%), Postives = 177/350 (50.57%), Query Frame = 0 Query: 179 FLYVEDPTTASLNLTVKDRNLLK-GDDVIGSCQVPLRLLEEKIGDDVPPAQGILEWSGILDIESAVPNTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGT-QMEWKDLLTDMAIYQEGLD----GPDDRR--LVHAGFRRAFRSIRGGVVQALQFIAPDL-----IVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLT--ETEEGQFR 513 L ++ P ++ ++ + LLK D++ G+ V L+ + ++ D P + S D+ S + K SG LV +DG D+ + E MK++ + +S +E W L + +G + ++ CFL N TDTQ IW D + K ++I+FRGT Q +WKDL TD+ + GL+ G D ++ VH+GF A+ S+R ++ L+ + + D W V V GHSLGGALA L+A EL A + +Y+FG+PRVGN F D Y+ ++K+ ++R+VN DI+ +PR LM Y H + V L E E +F+ Sbjct: 432 LLAIKAPKSSLADMKNATQELLKQADNIFGTLMV-LKAVVPQLSKDSPGTEKDRASSATSDVSSFSKSEKLSG-------LVNVDG---------ADEKNAEEMKTLF---SSAESAMEA--WAMLATALGHPSFIKSEFEKLCFLDNGITDTQLAIWRDARRKRVVIAFRGTEQTKWKDLQTDLMLAPVGLNPERIGGDFKQEVQVHSGFLSAYDSVRIRIISLLKMAIGYIDDVGELEDKWHVYVTGHSLGGALATLLAIELASSQLAKHGAITVTMYNFGSPRVGNKKFADVYNQKVKD-SWRVVNHRDIIPTVPR-------LMGYCHVAQPVYLAAGEVESVEFQ 751
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|1039844807|ref|XP_017192606.1| (PREDICTED: uncharacterized protein LOC103453525 isoform X2 [Malus domestica]) HSP 1 Score: 138.272 bits (347), Expect = 2.134e-30 Identity = 100/283 (35.34%), Postives = 149/283 (52.65%), Query Frame = 0 Query: 245 NTKSS--GTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTP------TGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGT-QMEWKDLLTDMAIYQEGLD----GPDDRR--LVHAGFRRAFRSIRGGVVQALQF-------IAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLT 505 NT+S+ GT EI+L+ ++ + +D L DP E + S + +S +E W L + +G + ++ CFL N TDTQ IW D K ++I+FRGT Q WKDL TD+ + GL+ G D ++ VH+GF RA+ S+R +V ++ IA L D W V + GHSLGGAL+ L+A EL A + +Y+FG+PRVGN F + Y+ ++K+ ++R+VN DI+ +PR LM Y H + V LT Sbjct: 335 NTESNAVGTSEIKLE------DSSNVEDDALTDPTTEEIASTRAAEEMKELFSSAESAMEA--WAMLATSLGHPSFIKSEFEKLCFLDNATTDTQVAIWRDSARKRLVIAFRGTEQSRWKDLRTDLMVAPTGLNPERIGGDFKQEVQVHSGFLRAYDSVRIRIVSLMKLAIGYFDDIAEPL--DKWHVYITGHSLGGALSTLLALELSSSQLAKRGLISVTMYNFGSPRVGNKVFAEIYNKKVKD-SWRVVNHRDIIPTIPR-------LMGYCHVAQPVYLT 599
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|657997791|ref|XP_008391285.1| (PREDICTED: uncharacterized protein LOC103453525 isoform X1 [Malus domestica]) HSP 1 Score: 137.887 bits (346), Expect = 5.529e-30 Identity = 100/283 (35.34%), Postives = 149/283 (52.65%), Query Frame = 0 Query: 245 NTKSS--GTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTP------TGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGT-QMEWKDLLTDMAIYQEGLD----GPDDRR--LVHAGFRRAFRSIRGGVVQALQF-------IAPDLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLT 505 NT+S+ GT EI+L+ ++ + +D L DP E + S + +S +E W L + +G + ++ CFL N TDTQ IW D K ++I+FRGT Q WKDL TD+ + GL+ G D ++ VH+GF RA+ S+R +V ++ IA L D W V + GHSLGGAL+ L+A EL A + +Y+FG+PRVGN F + Y+ ++K+ ++R+VN DI+ +PR LM Y H + V LT Sbjct: 498 NTESNAVGTSEIKLE------DSSNVEDDALTDPTTEEIASTRAAEEMKELFSSAESAMEA--WAMLATSLGHPSFIKSEFEKLCFLDNATTDTQVAIWRDSARKRLVIAFRGTEQSRWKDLRTDLMVAPTGLNPERIGGDFKQEVQVHSGFLRAYDSVRIRIVSLMKLAIGYFDDIAEPL--DKWHVYITGHSLGGALSTLLALELSSSQLAKRGLISVTMYNFGSPRVGNKVFAEIYNKKVKD-SWRVVNHRDIIPTIPR-------LMGYCHVAQPVYLT 762
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|1072948404|ref|XP_018484843.1| (PREDICTED: uncharacterized protein LOC108855494 [Raphanus sativus]) HSP 1 Score: 137.502 bits (345), Expect = 6.245e-30 Identity = 94/257 (36.58%), Postives = 137/257 (53.31%), Query Frame = 0 Query: 272 NLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGT-QMEWKDLLTDMAIYQEGLD----GPD--DRRLVHAGFRRAFRSIRGGVVQALQFIAPDLI------VDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLLT--ETEEGQFR 513 N+D D +N + + + +S +E W L + +G + ++ CFL NE TDTQ IW D + K ++I+FRGT Q +WKDL TD+ + GL+ G D + VH+GF A+ S+R ++ L+ +A I D W V V GHSLGGALA L+A EL A + +Y+FG+PRVGN F D Y+ ++K+ ++R+VN DI+ +PR LM Y H V L E E F+ Sbjct: 490 NVDGEDEKNAEEMKTLFSSAESAMEA--WAMLATAMGHPSFIKSEFEKLCFLDNEITDTQVAIWRDARRKRVVIAFRGTEQTKWKDLQTDLMLVPVGLNPERIGGDFKEEVQVHSGFLSAYDSVRIRIISLLK-MAIGYIDDVAEREDKWHVYVTGHSLGGALATLLAIELASSQLAKRGAITVTMYNFGSPRVGNKKFADVYNQKVKD-SWRVVNHRDIIPTVPR-------LMGYCHVAHPVYLAAGEVENTDFQ 735
BLAST of EWM27527.1 vs. NCBI_GenBank
Match: gi|567222518|ref|XP_006414888.1| (hypothetical protein EUTSA_v10024569mg [Eutrema salsugineum] >gi|557116058|gb|ESQ56341.1| hypothetical protein EUTSA_v10024569mg [Eutrema salsugineum]) HSP 1 Score: 136.732 bits (343), Expect = 8.335e-30 Identity = 130/449 (28.95%), Postives = 210/449 (46.77%), Query Frame = 0 Query: 85 GKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPE------------EQGGLLEKALSGSGCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQRFFLYVEDPTTASLNLTVKDRNLLK-GDDVIGSCQVPLRLLEEKIGDDVPPAQGILE---WSGILD-IESAVPNTKSSGTIEIELQLVPLDGNAVDKDDRNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRVGGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGT-QMEWKDLLTDMAIYQEGLD----GPDDRR--LVHAGFRRAFRSIRGGVVQALQF---IAPDLIV--DGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFGAPRVGNTAFCDEYDVRLKEVTFRIVNGLDIVARMPRGTGRSAVLMEYNHCGRTVLL 504 G GS SD QS+ + +NF ++ +I+Q LP E+ GL + + +G Y+ S LA + + + Q L + P ++ ++ + LLK D+V G+ V L+ + ++ D + + E SG+LD + + + K SG + + D+ + E MK++ + +S +E W L + +G + ++ CFL N+ TDTQ IW D + K ++I+FRGT Q +WKDL TD+ + GL+ G D ++ VH+GF A+ S+R ++ L+ D+ D W V V GHSLGGALA L+A EL A + +Y+FG+PRVGN F D Y+ ++K+ ++R+VN DI+ +PR LM Y H + V L Sbjct: 194 GDGDGSSNEMESDNESGTIQSESNLLDNFSGIVSQNIVQKLGLPSPGKLKWDGMEILEKFGLQSRKTAEAG---YIESG--------LATAETREVDDEKEDGQ---LAINAPKSSLADMKNATQELLKQADNVFGALMV-LKAVVPQLSKDSLGTEKVTEKDGASGVLDDVFGFLKSEKLSGLVTV----------------ARADEKNAEEMKTLF---SSAESAMEA--WAMLATALGHPSFIKSEFEKLCFLENDITDTQVAIWRDARRKRVVIAFRGTEQTKWKDLQTDLMLAPVGLNPERIGGDFKKEVQVHSGFLSAYDSVRIRIISLLKMAIGYVDDVTEHEDKWHVYVTGHSLGGALATLLAIELASSQLAKHGAINVTMYNFGSPRVGNKIFADVYNQKVKD-SWRVVNHRDIIPTVPR-------LMGYCHVAQPVYL 598 The following BLAST results are available for this feature:
BLAST of EWM27527.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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