EWM27513.1, cds3149 (CDS) Nannochloropsis gaditana

Overview
NameEWM27513.1
Unique Namecds3149
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:867285..868802 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27513.1
ProductZinc finger, CCCH-type
Orig transcript idgnl|cribi|Naga_100101g16.9051.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:867285..868802 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|585109779|gb|EWM27513.1| (Zinc finger, CCCH-type [Nannochloropsis gaditana])

HSP 1 Score: 1038.1 bits (2683), Expect = 0.000e+0
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0
Query:    1 MGVFPRCKIYAEMEPFVVVTSPPLEASIAPSLSSSTVPRVPPCDVKFIVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSREFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKVCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLPPGLSDGVEREERWRE 505
            MGVFPRCKIYAEMEPFVVVTSPPLEASIAPSLSSSTVPRVPPCDVKFIVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSREFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKVCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLPPGLSDGVEREERWRE
Sbjct:    1 MGVFPRCKIYAEMEPFVVVTSPPLEASIAPSLSSSTVPRVPPCDVKFIVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSREFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKVCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLPPGLSDGVEREERWRE 505          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|669152308|ref|XP_008611716.1| (hypothetical protein SDRG_07648 [Saprolegnia diclina VS20] >gi|530736602|gb|EQC34844.1| hypothetical protein SDRG_07648 [Saprolegnia diclina VS20])

HSP 1 Score: 195.667 bits (496), Expect = 4.455e-54
Identity = 143/452 (31.64%), Postives = 212/452 (46.90%), Query Frame = 0
Query:   49 VRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDT----SREF------LVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKVCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLP 490
            V+G++  +R  ++   FFD+V  S           R+E +L+ +    L   + K L   + +GDI++V+G L+T    +R F       +L AR + V+  WK                         G+    V          +  S+E   ++    CK+W+ T GRC+    CP  H  ++       AWLA R  ++   +H   D   P  K  K  RA +FA WLV+T+G E L +GSGV+DVAGG+G V   LW +++I  T+VDPR  +Y K+ + Q L+   G       +  +P      ++    G  A               E++ E     +   S+++GMHPD+ATDV  D A AF KP A +PCCVFA +FPHRR P             G+ V TY+ LV YL+AK       + +  FLPF GRN+VVY+ P
Sbjct:    6 VQGQLVHQRKLSRKCSFFDVVVGSA----------RVEAILKIQD--DLSVDDVKALRSRLVLGDIVKVDGVLETLPSATRPFSESPTGYLLHARDITVLTPWKE---------------------AQPGKTFTPVPVTTTTTTATQSLSKEAQAAV---PCKFWINT-GRCHKGAACPMRHDDVKELKALRKAWLADRLHKKRLVAHQADDPTDPHAKQSKHNRAGIFAKWLVETFGIEMLQSGSGVMDVAGGRGGVCFELWHQHKIPTTLVDPRPMKYTKR-QHQYLQAHVG-------EAHVPQWLELFEEASYVGATAD--------------ETKVEH----MHHVSLLLGMHPDEATDVIVDVALAFNKPFAIVPCCVFADKFPHRRTP------------SGDAVTTYDELVAYLVAK-----HPRIQTTFLPFDGRNRVVYYQP 377          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|813135858|ref|XP_012198630.1| (hypothetical protein SPRG_19678 [Saprolegnia parasitica CBS 223.65] >gi|641536984|gb|KDO30855.1| hypothetical protein SPRG_19678 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 194.897 bits (494), Expect = 1.139e-53
Identity = 148/452 (32.74%), Postives = 212/452 (46.90%), Query Frame = 0
Query:   49 VRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDT----------SREFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKVCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLP 490
            V+G++  +R  ++   FFDLV  S           R+E +L+ +    +   + K L   + +GD+++V+G L+T          S    +L AR + V+  WK           A    T TP + +    T +        LV+KE    V        CK+W+ T GRC+    CP  H  ++       AWLA R  ++   +H   D   P  K  K  RA +FA WLV T+G + L +GSGV+DVAGG+G V   LW ++++  T+VDPR  +Y K       RQ + L+         P +   T            Q   L E      ++  +     +R  S+V+GMHPD+ATDV  D A A+ KP A +PCCVFA +FPHRR P    GGD         V TY+ LV YL+AK         +  FLPF GRN+VVY+ P
Sbjct:    6 VQGQLVHQRKLSRKCSFFDLVVGSA----------RVEAILKIQD--DMSVDDVKALRSRLVLGDVIQVDGVLETLPAATQPFSESPTGYLLHARDITVLTPWKE----------AQPGKTFTP-LPATTVATTTTSMSKATPLVSKETQATV-------PCKFWINT-GRCHKGAACPMRHDDVKELKALRKAWLADRLHKKRLVAHQADDPTDPHAKQSKHCRAGIFAKWLVDTFGVDVLQSGSGVMDVAGGRGGVCFELWHQHKVPTTLVDPRPMKYTK-------RQHQYLQA-------HPNEAHVT------------QWLELFEHASYVGDAADDVKVQHMRHVSLVLGMHPDEATDVIVDVALAYNKPFAIVPCCVFADQFPHRRTP----GGD--------VVTTYDELVAYLVAK-----HPGIQTTFLPFDGRNRVVYYRP 383          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|1173948655|gb|OQR96761.1| (hypothetical protein ACHHYP_13619 [Achlya hypogyna])

HSP 1 Score: 193.356 bits (490), Expect = 5.365e-53
Identity = 141/452 (31.19%), Postives = 208/452 (46.02%), Query Frame = 0
Query:   49 VRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSREFLV----------LEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKV-CKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWL 489
            VRG++   R  ++   FFDL+ ++T          R+E +L+ +    L + +A R    + +GD + V+G L+      V          L A+ + V+ +WK  H            P ET   +                LV+ +   +  ++L +K  CK+WV T GRC+    CP  H           AWLA R  ++  A+H   D   P  K  K FRA +FA WLV+T+G + L  G+GV+D+AGG+G V   LW  + I  T++DPR  +Y K+ + Q L+     + + +       D     D + E   A +Q                          S+++GMHPD+ATDV  D A A  KP A +PCCVFA EFP RR P             G+ V TY+ LVEYL+AK       Q +  FLPF GRN+V+Y++
Sbjct:   11 VRGQLVHHRKLSQKCSFFDLL-IATDR--------RVEAILKLQDDLALDQVKALR--SRLVLGDEIIVQGTLEALSAATVPFNESPVGYLLHAKDITVVATWKETH------------PGETFVPLP--------------ALVHCDTPAQTTKTLEDKAPCKFWVNT-GRCHKGAACPMRHGDASELKALRKAWLADRLHKKRLAAHQADDPTDPHAKQSKHFRAAIFASWLVETFGCDVLQHGTGVMDIAGGRGGVCFELWHHHHIPTTLIDPRPMRYTKR-QHQYLKAHPTEKPVSQWLEMFELD-TYVGDAKDEAKAAHVQA------------------------ASLLLGMHPDEATDVIVDVALAHNKPFAIVPCCVFAEEFPDRRTP------------SGDPVTTYDSLVEYLMAK-----HPQVQSHFLPFDGRNRVLYYM 381          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|568037000|gb|ETM34599.1| (hypothetical protein L914_18341 [Phytophthora parasitica])

HSP 1 Score: 192.971 bits (489), Expect = 1.704e-52
Identity = 141/447 (31.54%), Postives = 224/447 (50.11%), Query Frame = 0
Query:   48 IVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSR--EFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEK--VCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLP 490
            IV G++  +R  ++   FFDL  V+T  G+ G++  R+E +L+     +L   E   + Y V +GDI+ V G ++       +++ AR + V+ +WK  H   P + F        P VV+  +   SV  +        + +E       E+   CK+W+ ++  C   + C  +H          A WL +R   +   +H++ D   P  K  K  RA +F +WLV+T+G E LA+G GVVDVAGG+G VS  LW K ++ CT+++PR  +  K+  + L +Q +     ER Q +       T  +  E  +  +      +    TTE+       ++ + S++VGMHPD+ATD  FD A  F KP A +PCCVF ++FP RR+P             G +V +YE+LVEYL AK       + ++ FLPF G+N V++  P
Sbjct:   27 IVEGQLMHQRRISRRCSFFDLASVAT--GSDGERE-RIEVILKIID-GELAAEEIDTIRYRVKVGDIVSVRGFVERLEGGASILVHARDIAVVRAWKDEH---PGMTF-----LPLPTVVTTAKRQ-SVGHEGNDTRGENDSTEPAATGASEERAHCKFWINSKT-CQHGDNCEFFHVSDAERKTERAKWLKERLHLKRVRAHIDEDPLDPHGKIGKQQRAQVFVEWLVETFGAEFLASGKGVVDVAGGRGSVSFELWNKRRLPCTLIEPRPMKLSKQQHKYLKKQKK-----ERKQSS------ETQASFSEILVPQVTALFNMDSFLETTENV-----QLVEQASLLVGMHPDEATDSIFDVAIKFNKPFAVVPCCVFGQKFPDRRQP------------NGSKVLSYENLVEYLTAK-----HPEIEKAFLPFDGKNLVLFRRP 426          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|301119363|ref|XP_002907409.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262105921|gb|EEY63973.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 191.43 bits (485), Expect = 3.620e-52
Identity = 136/447 (30.43%), Postives = 216/447 (48.32%), Query Frame = 0
Query:   47 FIVRGRVCSRRPFAKCMLFFDLVDVST-TNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSRE--FLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKVCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLP 490
             +V G++  +R  ++   FFDL  V+T ++G R     R+E +L+     +L   E   + Y+V +GDI+ + G ++   +   +++ AR + V+ +WK     NP + F L  PT                                        CK+W+ ++  C   + C  +H          A WL  R   +   +H+E D   P  K  K  RA +F +WLV+T+G E LA+G GVVDVAGG+G+VS  LW K ++ CT+++PR  +  K+  + L +Q +     ER Q +       T+ +  E  +  +      +    TTE+       ++ + S+++GMHPD+ATD  FD A  F KP A +PCCVF ++FPHRRR              G +V +YE+LVEYL AK       + ++ FLPF G+N V++  P
Sbjct:   27 ILVEGQLMHQRRISRKCSFFDLAAVATESDGERE----RIEVILKIID-GELSAEEIDTIRYNVKVGDIVHIRGFVERLGDGASILVHARDITVVRAWK---DENPGVPF-LPLPTRAH-------------------------------------CKFWINSKT-CQHGDNCEFFHVDDAERKTERAGWLKDRLHLKRVRAHIEEDPLEPHGKIGKQQRAQVFVEWLVETFGAEFLASGKGVVDVAGGRGNVSFELWNKRRLPCTLIEPRPMKLSKQQHKYLKKQKK-----ERRQSS------ETEASFSEALVPQVTALFNMDSFLETTENV-----QLVEQSSLLLGMHPDEATDSIFDVAIKFNKPFAVVPCCVFGQKFPHRRR------------ADGSKVVSYENLVEYLAAK-----HPEIEKAFLPFDGKNLVLFRRP 393          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|570315223|gb|ETO63171.1| (hypothetical protein F444_19058 [Phytophthora parasitica P1976])

HSP 1 Score: 192.2 bits (487), Expect = 4.396e-52
Identity = 140/447 (31.32%), Postives = 224/447 (50.11%), Query Frame = 0
Query:   48 IVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSR--EFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEK--VCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLP 490
            IV G++  +R  ++   FFDL  V+T  G+ G++  R+E +L+     +L   E   + Y V +GDI+ V G ++       +++ AR + V+ +WK  H   P + F        P VV+  +   SV  +        + +E       E+   CK+W+ ++  C   + C  +H          A WL +R   +   +H++ D   P  K  K  RA +F +WLV+T+G E LA+G GVVDVAGG+G VS  LW + ++ CT+++PR  +  K+  + L +Q +     ER Q +       T  +  E  +  +      +    TTE+       ++ + S++VGMHPD+ATD  FD A  F KP A +PCCVF ++FP RR+P             G +V +YE+LVEYL AK       + ++ FLPF G+N V++  P
Sbjct:   27 IVEGQLMHQRRISRRCSFFDLASVAT--GSDGERE-RIEVILKIID-GELAAEEIDTIRYRVKVGDIVSVRGFVERLEGGASILVHARDIAVVRAWKDEH---PGMTF-----LPLPTVVTTAKRQ-SVGHEGNDTRGENDSTEPAATGASEERAHCKFWINSKT-CQHGDNCEFFHVSDAERKTERAKWLKERLHLKRVRAHIDEDPLDPHGKIGKQQRAQVFVEWLVETFGAEFLASGKGVVDVAGGRGSVSFELWNRRRLPCTLIEPRPMKLSKQQHKYLKKQKK-----ERKQSS------ETQASFSEILVPQVTALFNMDSFLETTENV-----QLVEQASLLVGMHPDEATDSIFDVAIKFNKPFAVVPCCVFGQKFPDRRQP------------NGSKVLSYENLVEYLTAK-----HPEIEKAFLPFDGKNLVLFRRP 426          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|675176183|ref|XP_008896976.1| (hypothetical protein PPTG_05220 [Phytophthora parasitica INRA-310] >gi|568102739|gb|ETN17410.1| hypothetical protein PPTG_05220 [Phytophthora parasitica INRA-310])

HSP 1 Score: 191.815 bits (486), Expect = 5.703e-52
Identity = 142/448 (31.70%), Postives = 224/448 (50.00%), Query Frame = 0
Query:   48 IVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSR--EFLVLEARALRVIESWKALHKHNPRLGFALEWPT--ETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEKV-CKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLP 490
            IV G++  +R  ++   FFDL  V+T  G+ G++  R+E +L+     +L   E   + Y V +GDI+ V G ++       +++ AR + V+ +WK  H   P + F L  PT   T    S G        ++        G+ E      E+  CK+W+ ++  C   + C  +H          A WL +R   +   +H++ D   P  K  K  RA +F +WLV+T+G E LA+G GVVDVAGG+G VS  LW + ++ CT+++PR  +  K+  + L +Q +     ER Q +       T  +  E  +  +      +    TTE+       ++ + S++VGMHPD+ATD  FD A  F KP A +PCCVF ++FP RR+P             G +V +YE+LVEYL AK       + ++ FLPF G+N V++  P
Sbjct:   27 IVEGQLMHQRRISRRCSFFDLASVAT--GSDGERE-RIEVILKIID-GELAAEEIDTIRYRVKVGDIVSVRGFVERLEGGASILVHARDIAVVRAWKDEH---PGMTF-LPLPTVVTTTKRQSVGHEGNDTRGENDSTEPTATGASE------ERAHCKFWINSKT-CQHGDNCEFFHVSDAERKTERAKWLKERLHLKRVRAHIDEDPLDPHGKIGKQQRAQVFVEWLVETFGAEFLASGKGVVDVAGGRGSVSFELWNRRRLPCTLIEPRPMKLSKQQHKYLKKQKK-----ERKQSS------ETQASFSEILVPQVTALFNMDSFLETTENV-----QLVEQASLLVGMHPDEATDSIFDVAIKFNKPFAVVPCCVFGQKFPDRRQP------------NGSKVLSYENLVEYLTAK-----HPEIEKAFLPFDGKNLVLFRRP 426          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|570969287|gb|ETP32406.1| (hypothetical protein F442_18883 [Phytophthora parasitica P10297])

HSP 1 Score: 191.43 bits (485), Expect = 6.597e-52
Identity = 141/447 (31.54%), Postives = 225/447 (50.34%), Query Frame = 0
Query:   48 IVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSR--EFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEK--VCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLP 490
            IV G++  +R  ++   FFDL  V+T  G+ G++  R+E +L+     +L   E   + Y V +GDI+ V G ++       +++ AR + V+ +WK  H   P + F        P VV+  +   SV  +        + +E       E+   CK+W+ ++  C   + C  +H          A WL +R   +   +H++ D   P  K  K  RA +F +WLV+T+G E LA+G GVVDVAGG+G VS  LW K ++ CT+++PR  +  K+  + L +Q +     ER Q +       T  +  E  ++ +      +    TTE+       ++ + S++VGMHPD+ATD  FD A  F KP A +PCCVF ++FP RR+P             G +V +YE+LVEYL AK       + ++ FLPF G+N V++  P
Sbjct:   27 IVEGQLMHQRRISRRCSFFDLASVAT--GSDGERE-RIEVILKIID-GELAAEEIDTIRYRVKVGDIVSVRGFVERLEGGASILVHARDIAVVRAWKDEH---PGMTF-----LPLPTVVTTTKRQ-SVGHEGNDTRGENDSTEPAATGASEERAHCKFWINSKT-CQHGDNCEFFHVSDAERKTERAKWLKERLHLKRVRAHIDEDPLDPHGKIGKQQRAQVFVEWLVETFGAEFLASGKGVVDVAGGRGSVSFELWNKRRLPCTLIEPRPMKLSKQQHKYLKKQKK-----ERKQSS------ETQASFSEILVSQVTALFNMDSFLETTENV-----QLVEQASLLVGMHPDEATDSIFDVAIKFNKPFAVVPCCVFGQKFPDRRQP------------NGCKVLSYENLVEYLTAK-----HPEIEKAFLPFDGKNLVLFRRP 426          
BLAST of EWM27513.1 vs. NCBI_GenBank
Match: gi|566011464|gb|ETI34375.1| (hypothetical protein F443_19102 [Phytophthora parasitica P1569] >gi|567977658|gb|ETL28155.1| hypothetical protein L916_18426 [Phytophthora parasitica])

HSP 1 Score: 191.43 bits (485), Expect = 8.124e-52
Identity = 141/447 (31.54%), Postives = 224/447 (50.11%), Query Frame = 0
Query:   48 IVRGRVCSRRPFAKCMLFFDLVDVSTTNGTRGDQIIRLECLLRSEGLAKLQKAEAKRLMYDVSMGDILEVEGCLDTSR--EFLVLEARALRVIESWKALHKHNPRLGFALEWPTETPNVVSNGEHTLSVYTQDGCVLVNKEGSEEVIESLLEK--VCKYWVATQGRCYSANGCPNYHPPLERHAQYYAAWLAKRRRERARASHLEGDGHSPEDKSKKAFRAILFADWLVKTYGRERLAAGSGVVDVAGGKGDVSCRLWGKYQIRCTIVDPRETQYRKKVRRQLLRQGRGLEGIERVQCTMPTDFGRTDDTEGEGGMASLQGEGLRERQGPTTESQAERLWDILRRCSMVVGMHPDQATDVCFDAAFAFKKPVACLPCCVFAREFPHRRRPRRGGGGDGACPGQGEEVETYEHLVEYLLAKPVPWAQGQSKREFLPFLGRNQVVYWLP 490
            IV G++  +R  ++   FFDL  V+T  G+ G++  R+E +L+     +L   E   + Y V +GDI+ V G ++       +++ AR + V+ +WK  H   P + F        P VV+  +   SV  +        + +E       E+   CK+W+ ++  C   + C  +H          A WL +R   +   +H++ D   P  K  K  RA +F +WLV+T+G E LA+G GVVDVAGG+G VS  LW K ++ CT+++PR  +  K+  + L +Q +     ER Q +       T  +  E  +  +      +    TTE+       ++ + S++VGMHPD+ATD  FD A  F KP A +PCCVF ++FP RR+P             G +V +YE+LVEYL AK       + ++ FLPF G+N V++  P
Sbjct:   27 IVEGQLMHQRRISRRCSFFDLASVAT--GSDGERE-RIEVILKIID-GELAAEEIDTIRYRVKVGDIVSVRGFVERLEGGASILVHARDIAVVRAWKDEH---PGMTF-----LPLPTVVTTAKRQ-SVGHEGNDTRGENDSTEPAATGASEERAHCKFWINSKT-CQHGDNCEFFHVSDAERKTERAKWLKERLHLKRVRAHIDEDPLDPHGKIGKQQRAQVFVEWLVETFGAEFLASGKGVVDVAGGRGSVSFELWNKRRLPCTLIEPRPMKLSKQQHKYLKKQKK-----ERKQSS------ETQASFSEILVPQVTALFNMDSFLETTENV-----QLVEQASLLVGMHPDEATDSIFDVAIKFNKPFAVVPCCVFGQKFPDRRQP------------NGCKVLSYENLVEYLTAK-----HPEIEKAFLPFDGKNLVLFRRP 426          
The following BLAST results are available for this feature:
BLAST of EWM27513.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109779|gb|EWM27513.1|0.000e+0100.00Zinc finger, CCCH-type [Nannochloropsis gaditana][more]
gi|669152308|ref|XP_008611716.1|4.455e-5431.64hypothetical protein SDRG_07648 [Saprolegnia dicli... [more]
gi|813135858|ref|XP_012198630.1|1.139e-5332.74hypothetical protein SPRG_19678 [Saprolegnia paras... [more]
gi|1173948655|gb|OQR96761.1|5.365e-5331.19hypothetical protein ACHHYP_13619 [Achlya hypogyna... [more]
gi|568037000|gb|ETM34599.1|1.704e-5231.54hypothetical protein L914_18341 [Phytophthora para... [more]
gi|301119363|ref|XP_002907409.1|3.620e-5230.43conserved hypothetical protein [Phytophthora infes... [more]
gi|570315223|gb|ETO63171.1|4.396e-5231.32hypothetical protein F444_19058 [Phytophthora para... [more]
gi|675176183|ref|XP_008896976.1|5.703e-5231.70hypothetical protein PPTG_05220 [Phytophthora para... [more]
gi|570969287|gb|ETP32406.1|6.597e-5231.54hypothetical protein F442_18883 [Phytophthora para... [more]
gi|566011464|gb|ETI34375.1|8.124e-5231.54hypothetical protein F443_19102 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3157rna3157Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications