EWM27523.1, cds3148 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|585109789|gb|EWM27523.1| (dna rna non-specific nuclease [Nannochloropsis gaditana]) HSP 1 Score: 829.706 bits (2142), Expect = 0.000e+0 Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0
Query: 1 MGFARSFIGKRHVKTLMTSVGGSLAILLSTDREDRKRFAQAQAPGMARDLDKWSQVGLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEVEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFFAQALSQEDKERLDGRVQLLRGTLGGEEGGIAGLLAAQAPSTALVTREGYGHDSGRWGKGRNKGGLRLNLAGPEHLCEALACQLPPERFWELTDGRAGGGNGGGRRKRGGDTTESSNSLTPW 404
MGFARSFIGKRHVKTLMTSVGGSLAILLSTDREDRKRFAQAQAPGMARDLDKWSQVGLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEVEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFFAQALSQEDKERLDGRVQLLRGTLGGEEGGIAGLLAAQAPSTALVTREGYGHDSGRWGKGRNKGGLRLNLAGPEHLCEALACQLPPERFWELTDGRAGGGNGGGRRKRGGDTTESSNSLTPW
Sbjct: 1 MGFARSFIGKRHVKTLMTSVGGSLAILLSTDREDRKRFAQAQAPGMARDLDKWSQVGLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEVEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFFAQALSQEDKERLDGRVQLLRGTLGGEEGGIAGLLAAQAPSTALVTREGYGHDSGRWGKGRNKGGLRLNLAGPEHLCEALACQLPPERFWELTDGRAGGGNGGGRRKRGGDTTESSNSLTPW 404
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|545366964|ref|XP_005648352.1| (DNA/RNA non-specific endonuclease, partial [Coccomyxa subellipsoidea C-169] >gi|384250328|gb|EIE23808.1| DNA/RNA non-specific endonuclease, partial [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 239.965 bits (611), Expect = 2.437e-74 Identity = 123/234 (52.56%), Postives = 157/234 (67.09%), Query Frame = 0
Query: 55 QVGLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEV------EG---RYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAG 279
+ GLP E F+ NFV+ +D+RTRNPRWV+E ITR +GE +R+ V FYE++S+D FRS+ SD+ SG+DRGHMAPAAN++ + TM ETF L+N SPQVG GFNRDYWAR E+F LT+ C VY+V+GPLFLP + G + M + ++G PP +VAVPTHFFK VLAE EG ++ AFVLPNA + +VPLT F VPLE LE+AAG
Sbjct: 2 KYGLPSSEGLRFFK-NFVLSFDSRTRNPRWVLEHITRAQTQGEGNRKNVEFYEDKSLDQRFRSRLSDFKESGFDRGHMAPAANHKETADTMLETFVLSNTSPQVGRGFNRDYWARFERFVNLLTRTCDDVYVVTGPLFLPSKTPLG-------------YFMQHPMIGQPPRMVAVPTHFFKVVLAERATATPDEGSGTEAIMGAFVLPNALLQADVPLTAFSVPLEALEEAAG 221
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|760438607|ref|XP_011396372.1| (Nuclease C1 [Auxenochlorella protothecoides] >gi|675351059|gb|KFM23499.1| Nuclease C1 [Auxenochlorella protothecoides]) HSP 1 Score: 229.18 bits (583), Expect = 7.808e-68 Identity = 117/275 (42.55%), Postives = 163/275 (59.27%), Query Frame = 0
Query: 70 NFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEV-EGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFFAQALSQEDKERLDGRVQLLRGTLGGEEGGIAGLLAAQAPSTALVTRE-GYGHDSGRWGKG 342
NF+ D R RNP+WV+E +TR +G+ R F E+ + FR+K SDY +GYDRGHMAPA+N++ S +M+ETF+L+N++PQVGGGFNRDYWAR E+F +D TK V++V+GPL++PR +G +++ + +LG PP +VAVPTHFFK VLAE + VAAFV+PN+ IP E PL+ F VPL +LE+ +G+ FF L +D R+ L T+ PS + R G H + W G
Sbjct: 10 NFIASIDTRLRNPKWVIEHLTRSKLKGDGTRSSSQFTEDAGVGARFRAKLSDYRGTGYDRGHMAPASNHKESQGSMDETFSLSNIAPQVGGGFNRDYWARFERFVQDTTKSFDDVWVVTGPLYIPRPGPSG-------------WVLEHPMLGQPPQMVAVPTHFFKVVLAEQGDASTAVAAFVMPNSAIPAEYPLSAFSVPLTSLEEVSGLTFFPSLL--DDARRMGLDAAALSSTMA-------------VPSKLAIVRSCGNLHVTASWSSG 256
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|633907520|gb|KDD73679.1| (DNA/RNA non-specific endonuclease [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 224.172 bits (570), Expect = 8.834e-67 Identity = 126/329 (38.30%), Postives = 180/329 (54.71%), Query Frame = 0
Query: 58 LPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAE------VEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFFAQALSQEDKERLDGRVQLL-----RGTLGGEEGGIAGLLAAQAPSTALVTREGYGHDSGRWGKGRNKGGLRLNLAGPEHLCEALACQLPPERFWELT 375
+P G+ +F + + D R RNPRWV+E +T + +G R F E+E I+P FR++ SDY SGYDRGHMAPA+N+++S + M+ TFTL+N PQVG GFNRDYWAR E++ + TK+ V++V+GPL+LPR G ++M + +LG P L+AVPTHFFK +LAE + AAFV+PN PI P+T + VPL LE+AAG+ FF + + ++ +D L + L G E LL AL KG+ G G H+C++++C LP + FW+ T
Sbjct: 1 MPLGDRLRVF-DRYASLVDVRLRNPRWVIEHLTAASLQGAGSRGNSQFVEDEGIEPRFRARLSDYRGSGYDRGHMAPASNHKASQQAMDATFTLSNTCPQVGEGFNRDYWARFERWVQSCTKQYDDVWVVTGPLYLPRPVAPG----------AKDWVMQHPMLGQAPHLMAVPTHFFKLILAEKKETGGKKSTVAAAAFVMPNCPIAESDPMTAYAVPLSALEEAAGLVFFPKLIGDAERGTVDAAALLWQARGRKALLQGGEKHQPVLLEGPVSRNALPP-----------AKGKAAAGRPTTPIG--HMCDSVSCVLPAKEFWKTT 305
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|1178050429|gb|ORE06048.1| (hypothetical protein BCV72DRAFT_292443 [Rhizopus microsporus var. microsporus]) HSP 1 Score: 224.172 bits (570), Expect = 8.957e-67 Identity = 110/249 (44.18%), Postives = 155/249 (62.25%), Query Frame = 0
Query: 43 APGMARDLDKWSQV------GLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCR--GEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEVEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFF 283
AP + LD + G PG ++R +V Y+ R RNP WV E +T D+ + + DR+ +F E++ + P FR+K +DY SG+DRGHM PAA+ ++S +M+ETF L N++PQVG GFNRDYWA +E F R LT++ VY+ +GPL+LP Q+ G +F + Y+++G+PP VAVPTHF+K ++ GRY V AFVLPNAPIP PL F VPL+ +E+ AG+ FF
Sbjct: 50 APSNNKALDNLEKAKAILPFGFPGPVNDLIYRSAYVTSYNRRDRNPNWVAEHLTVDSLKRGDDVDRQKSNFKEDDGVPPQFRAKLADYFRSGFDRGHMVPAADVKNSQVSMDETFYLTNIAPQVGEGFNRDYWAYLENFCRTLTQKFSDVYVFTGPLYLPHQEADG------------KFYVKYQVIGNPPN-VAVPTHFYKVIMTHKNGRYSVGAFVLPNAPIPDNTPLEAFKVPLDAVERGAGLVFF 285
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|1178068170|gb|ORE22564.1| (hypothetical protein BCV71DRAFT_209054 [Rhizopus microsporus]) HSP 1 Score: 223.787 bits (569), Expect = 1.333e-66 Identity = 106/229 (46.29%), Postives = 149/229 (65.07%), Query Frame = 0
Query: 57 GLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCR--GEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEVEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFF 283
G PG ++R +V Y+ R RNP WV E +T D+ + + DR+ +F E++ + P FR+K +DY SG+DRGHM PAA+ ++S +M+ETF L N++PQVG GFNRDYWA +E F R LT++ VY+ +GPL+LP Q+ G +F + Y+++G+PP VAVPTHF+K ++ GRY V AFVLPNAPIP PL F VPL+ +E+ AG+ FF
Sbjct: 70 GFPGPVNDLIYRSAYVTSYNRRDRNPNWVAEHLTVDSLKRGDDVDRQKSNFKEDDGVPPQFRAKLADYFRSGFDRGHMVPAADVKNSQVSMDETFYLTNIAPQVGEGFNRDYWAYLENFCRTLTQKFSDVYVFTGPLYLPHQEADG------------KFYVKYQVIGNPPN-VAVPTHFYKVIMTHKNGRYSVGAFVLPNAPIPDNTPLEAFKVPLDAVERGAGLVFF 285
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|1026271785|gb|OAD04825.1| (hypothetical protein MUCCIDRAFT_155727 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 223.787 bits (569), Expect = 1.484e-66 Identity = 105/229 (45.85%), Postives = 150/229 (65.50%), Query Frame = 0
Query: 57 GLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCR--GEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEVEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFF 283
G PG + ++R +V Y+ R RNP WV E +T + + + DR+ +F E++ I P F++K +DY SG+DRGHM PAA+ ++S +M+ETF L N++PQVG GFNRDYWA +E F R LT + VY+ +GPL+LP Q+ G +F + Y+++G+PP VAVPTHF+K +L +G+Y V AFVLPN PIP + PLT F VPL+ +E+ AG+ FF
Sbjct: 70 GFPGPVSDIVYRNAYVTSYNRRDRNPNWVAEHLTAASLKRGDDVDRQKSNFREDDHIPPQFQAKLNDYFRSGFDRGHMVPAADVKNSQVSMDETFYLTNIAPQVGQGFNRDYWAHLEHFCRQLTTKFSDVYVFTGPLYLPHQEADG------------KFYVKYQMIGNPPN-VAVPTHFYKVILTHHQGKYSVGAFVLPNQPIPDQTPLTAFQVPLDAVERGAGLTFF 285
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|727143683|emb|CEG73976.1| (Putative Endonuclease G, mitochondrial [Rhizopus microsporus]) HSP 1 Score: 223.402 bits (568), Expect = 1.859e-66 Identity = 106/229 (46.29%), Postives = 149/229 (65.07%), Query Frame = 0
Query: 57 GLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCR--GEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEVEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFF 283
G PG ++R +V Y+ R RNP WV E +T D+ + + DR+ +F E++ + P FR+K +DY SG+DRGHM PAA+ ++S +M+ETF L N++PQVG GFNRDYWA +E F R LT++ VY+ +GPL+LP Q+ G +F + Y+++G+PP VAVPTHF+K ++ GRY V AFVLPNAPIP PL F VPL+ +E+ AG+ FF
Sbjct: 70 GFPGPVNDLIYRSAYVTSYNRRDRNPNWVAEHLTVDSLKRGDDVDRQKSNFKEDDGVPPQFRAKLADYFRSGFDRGHMVPAADVKNSQVSMDETFYLTNIAPQVGEGFNRDYWAYLENFCRTLTQKFSDVYVFTGPLYLPHQEADG------------KFYVKYQVIGNPPN-VAVPTHFYKVIMTHKNGRYSVGAFVLPNAPIPDNTPLEAFKVPLDAVERGAGLVFF 285
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|758355062|dbj|GAN02830.1| (mitochondrial nuclease [Mucor ambiguus]) HSP 1 Score: 223.016 bits (567), Expect = 2.629e-66 Identity = 105/229 (45.85%), Postives = 149/229 (65.07%), Query Frame = 0
Query: 57 GLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCR--GEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAEVEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFF 283
G PG + ++R +V Y+ R RNP WV E +T + + + DR+ +F E++ I P F++K +DY SG+DRGHM PAA+ ++S +M ETF L N++PQVG GFNRDYWA +E F R LT + VY+ +GPL+LP Q+ G +F + Y+++G+PP VAVPTHF+K +L +G+Y V AFVLPN PIP + PLT F VPL+ +E+ AG+ FF
Sbjct: 73 GFPGPVSDIVYRNAYVTSYNRRDRNPNWVAEHLTAASLKRGDDVDRQKSTFKEDDHIPPQFQAKLNDYFRSGFDRGHMVPAADVKNSQVSMNETFYLTNIAPQVGEGFNRDYWAHLEHFCRQLTTKFSDVYVFTGPLYLPHQEADG------------KFYVKYQMIGNPPN-VAVPTHFYKVILTHHQGKYSVGAFVLPNQPIPDQTPLTAFQVPLDAVERGAGLTFF 288
BLAST of EWM27523.1 vs. NCBI_GenBank
Match: gi|693501819|emb|CEF96823.1| (DNA/RNA non-specific endonuclease, active site [Ostreococcus tauri]) HSP 1 Score: 225.713 bits (574), Expect = 3.889e-66 Identity = 130/321 (40.50%), Postives = 186/321 (57.94%), Query Frame = 0
Query: 68 RENFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRD--LTKRCQSVYLVSGPLFLPRQKQAGDAPFTSNPTSKARFI--------------MSYELLGDPPGLVAVPTHFFKCVLAEVE-GRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFFAQALSQEDKERLDGRVQLLRGTLGGEEGGIAGLLAAQAPSTALVTREGYGHDSGRWGKGRNKGGLRLNLAGPEHLCEALACQLPPERF 371
+ ++V +D RTRNPRWVME ITR+T G R+ F E+E++ RS+ +DY SGYDRGH+ AA+ + S + M+ TF L+NVSPQVG GFNRDYWA++E+F RD ++ Y+ +GPLFL + ++ DA + + AR + M + +LG+PP L+AVPTHFFK V E E R AAFVLPN+ IP VPL RF+VPL +LE +G+ FF + L+ ED+ R + Q T + G +G L + PS + V+ + G + + G + N HLC+ AC+L P ++
Sbjct: 106 KSSYVHAFDGRTRNPRWVMEVITRETVGGSGSRKRSDFAEDEAVSWKHRSRLADYRGSGYDRGHLVAAADQKGSQEDMDATFALSNVSPQVGEGFNRDYWAKLEQFVRDEACADGTKAAYVATGPLFLASRSESADA---ESFDASARAVDHANVGAPRPTVWEMRHPMLGEPPALMAVPTHFFKVVFVEGEDSRVSCAAFVLPNSSIPKNVPLRRFVVPLTDLEIVSGLEFFRRGLAGEDRRRYERAEQTFLTTTAKQLPG-SGKLPSLPPSKSGVS--APFNPLGDQSELVKESGKKWNDV--RHLCDITACELKPSKW 418 The following BLAST results are available for this feature:
BLAST of EWM27523.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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