EWM27581.1, cds3128 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27581.1 vs. NCBI_GenBank
Match: gi|585109848|gb|EWM27581.1| (hypothetical protein Naga_100015g23 [Nannochloropsis gaditana]) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
Query: 1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKKRGELNMKAETGAGKRGVLDRTNSTAIQNYNPQQQRQYYPPPVPPQPFNAESAVMVGLVVVDQVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEVYDDIAADIRLTSLQSALEEARMAQGLAANDPEKKSATDADGGNEDQEEGDPGGVWGTGALQQDIYYGIGVGV 321
MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKKRGELNMKAETGAGKRGVLDRTNSTAIQNYNPQQQRQYYPPPVPPQPFNAESAVMVGLVVVDQVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEVYDDIAADIRLTSLQSALEEARMAQGLAANDPEKKSATDADGGNEDQEEGDPGGVWGTGALQQDIYYGIGVGV
Sbjct: 1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKKRGELNMKAETGAGKRGVLDRTNSTAIQNYNPQQQRQYYPPPVPPQPFNAESAVMVGLVVVDQVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEVYDDIAADIRLTSLQSALEEARMAQGLAANDPEKKSATDADGGNEDQEEGDPGGVWGTGALQQDIYYGIGVGV 321
BLAST of EWM27581.1 vs. NCBI_GenBank
Match: gi|585108119|gb|EWM26125.1| (hypothetical protein Naga_100014g61 [Nannochloropsis gaditana]) HSP 1 Score: 79.7221 bits (195), Expect = 3.265e-13 Identity = 44/151 (29.14%), Postives = 84/151 (55.63%), Query Frame = 0
Query: 1 MPYLKSNW--SSMPPLEE---FGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKK 146
MP+ K NW +S PP + FAFG+ + + + TL + + A+ C L V+LEH ++V +L ++C A + V++M ++ + ++T ++G P L+ FR LL+ ++W+L++KFLF ++ I+ +S+ E ++
Sbjct: 1 MPHSKFNWRSTSSPPSQNPDGLFAFAFGDTWKLTDYTLVKPE-NAKGCTLDVSLEHDSKVTQLQVVCNASALQVSVM--QAMNAQDFKWITQMRGTPLPNQPDLYYFRTPEELLTQ-KLWRLRVKFLFSSTDISAVRIQTLSLSFEKLTRR 147
BLAST of EWM27581.1 vs. NCBI_GenBank
Match: gi|585110557|gb|EWM28212.1| (hypothetical protein Naga_100004g75 [Nannochloropsis gaditana]) HSP 1 Score: 78.9518 bits (193), Expect = 7.310e-13 Identity = 82/349 (23.50%), Postives = 160/349 (45.85%), Query Frame = 0
Query: 1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLT---QTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIV-EDQAKKRGELN------MKAETGAGKRGVL---DRTN------STAIQNYNPQ--QQRQYYPP----------PVPPQPFNAESAVMVGLV--VVDQVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEV-----------YDDIAADI--RLTSLQSAL--EEARMAQGLAA---NDPEKKSATDADGGNEDQEEG 298
MPY++SNW + +F G + + E+ L Q P + C+LHV +E ARV ++++ +A + + +++G Y+ + +G+ + ++P + ++ +S L V V +Q++ + + + ++SV+V E ++ R ++ A T +G L TN ST +N + Q QQ QY V P AE AV+ + V+ ++L V++++ + + ST + E ++ A +K +E K+ EEV + + A + R++ S L E + Q LAA D ++ + + +GG E+ ++G
Sbjct: 1 MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGP--KGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDG 347 The following BLAST results are available for this feature:
BLAST of EWM27581.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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