EWM27581.1, cds3128 (CDS) Nannochloropsis gaditana

Overview
NameEWM27581.1
Unique Namecds3128
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:815853..816818 -

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Properties
Property NameValue
Protein idEWM27581.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100015g23.6397.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:815853..816818 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM27581.1 vs. NCBI_GenBank
Match: gi|585109848|gb|EWM27581.1| (hypothetical protein Naga_100015g23 [Nannochloropsis gaditana])

HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
Query:    1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKKRGELNMKAETGAGKRGVLDRTNSTAIQNYNPQQQRQYYPPPVPPQPFNAESAVMVGLVVVDQVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEVYDDIAADIRLTSLQSALEEARMAQGLAANDPEKKSATDADGGNEDQEEGDPGGVWGTGALQQDIYYGIGVGV 321
            MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKKRGELNMKAETGAGKRGVLDRTNSTAIQNYNPQQQRQYYPPPVPPQPFNAESAVMVGLVVVDQVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEVYDDIAADIRLTSLQSALEEARMAQGLAANDPEKKSATDADGGNEDQEEGDPGGVWGTGALQQDIYYGIGVGV
Sbjct:    1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKKRGELNMKAETGAGKRGVLDRTNSTAIQNYNPQQQRQYYPPPVPPQPFNAESAVMVGLVVVDQVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEVYDDIAADIRLTSLQSALEEARMAQGLAANDPEKKSATDADGGNEDQEEGDPGGVWGTGALQQDIYYGIGVGV 321          
BLAST of EWM27581.1 vs. NCBI_GenBank
Match: gi|585108119|gb|EWM26125.1| (hypothetical protein Naga_100014g61 [Nannochloropsis gaditana])

HSP 1 Score: 79.7221 bits (195), Expect = 3.265e-13
Identity = 44/151 (29.14%), Postives = 84/151 (55.63%), Query Frame = 0
Query:    1 MPYLKSNW--SSMPPLEE---FGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKK 146
            MP+ K NW  +S PP +       FAFG+ + + + TL + +  A+ C L V+LEH ++V +L ++C A  + V++M  ++     + ++T ++G      P L+ FR    LL+  ++W+L++KFLF      ++ I+ +S+  E   ++
Sbjct:    1 MPHSKFNWRSTSSPPSQNPDGLFAFAFGDTWKLTDYTLVKPE-NAKGCTLDVSLEHDSKVTQLQVVCNASALQVSVM--QAMNAQDFKWITQMRGTPLPNQPDLYYFRTPEELLTQ-KLWRLRVKFLFSSTDISAVRIQTLSLSFEKLTRR 147          
BLAST of EWM27581.1 vs. NCBI_GenBank
Match: gi|585110557|gb|EWM28212.1| (hypothetical protein Naga_100004g75 [Nannochloropsis gaditana])

HSP 1 Score: 78.9518 bits (193), Expect = 7.310e-13
Identity = 82/349 (23.50%), Postives = 160/349 (45.85%), Query Frame = 0
Query:    1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLT---QTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIV-EDQAKKRGELN------MKAETGAGKRGVL---DRTN------STAIQNYNPQ--QQRQYYPP----------PVPPQPFNAESAVMVGLV--VVDQVLGVMTKEIQDNLESTCRGVEKRLLADLKRLEGKMRRIEEV-----------YDDIAADI--RLTSLQSAL--EEARMAQGLAA---NDPEKKSATDADGGNEDQEEG 298
            MPY++SNW  +       +F  G + +  E+ L    Q  P  + C+LHV +E  ARV  ++++ +A  + + +++G       Y+ +   +G+ + ++P  + ++  +S L  V V  +Q++        + + + ++SV+V E  ++ R  ++        A T +G    L     TN      ST  +N + Q  QQ QY              V P    AE AV+   +  V+ ++L V++++ +  + ST +  E ++ A +K +E K+   EEV            + + A +  R++   S L  E  +  Q LAA    D ++  + + +GG E+ ++G
Sbjct:    1 MPYVRSNWEGLTKFNGGHKFEVGHVHSFNEVKLARPLQAGP--KGCFLHVTMEKDARVSYMEMVTSAREVEMYVLKGGHGASGEYSKVGGQRGRPAVDHPYKYHYKFTSSDLPDVPVALVQLRLTPHEEDAREVYLFRLSVLVGEANSRHRSNISRGIGGLQDALTVSGNGKYLSGHSSTNTSMVPMSTGRRNSSSQGPQQGQYGSSGVVATRNNENQVVPAGSGAEGAVVADALNDVMGKMLTVVSRKTKGYVGSTYKKTEDKISARMKSIEAKISGFEEVVGQNLERRLLDLEHVMATLNERISPKLSPLAPEGKKQGQSLAAPGKRDSDRSDSVNCEGGVEESKDG 347          
The following BLAST results are available for this feature:
BLAST of EWM27581.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585109848|gb|EWM27581.1|0.000e+0100.00hypothetical protein Naga_100015g23 [Nannochlorops... [more]
gi|585108119|gb|EWM26125.1|3.265e-1329.14hypothetical protein Naga_100014g61 [Nannochlorops... [more]
gi|585110557|gb|EWM28212.1|7.310e-1323.50hypothetical protein Naga_100004g75 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3136rna3136Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications