EWM27531.1, cds3110 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|585109798|gb|EWM27531.1| (general transcription factor polypeptide 5 [Nannochloropsis gaditana]) HSP 1 Score: 1518.44 bits (3930), Expect = 0.000e+0 Identity = 754/754 (100.00%), Postives = 754/754 (100.00%), Query Frame = 0
Query: 1 MEILPTQRATRASDVLAPSEQREDSVNVKLTAGEQGICVASNICPAETCMEAEGGILPLTSKKDHATVRLETSKPGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITGQRYAVHTEVVGTVSTTFQFRCLADFQYLTTQAFLPPGTPDLVSQARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLEKVKRAYEQVRRKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGSELQLFGLPVRRQMVFQLCDLGGASLQELVLGLPRKALCSPQGGWFRLSDLNRLRVRIKRYLSSRVAECVRTGSLEAVVGPEEGALSSSAMIKEAEARRGREVVWREDDFKKGAGVDRDQEGWPERQGGKAMTRRSSKRTSAGGGGRRSAEVMEGEGGVRRNVKRARRAALKQAEERQDEVSEWEDDRELDGGEGGSLRGGQEDEEGEEDEERGLRHLGDLLGQPMGGIKSSRGDRRTARAGRQSSGGRVEEVEDTDELGGNFVIPLTAGEMENASSIRLLGGYQGGDYSSSSSTEEDEGAESD 754
MEILPTQRATRASDVLAPSEQREDSVNVKLTAGEQGICVASNICPAETCMEAEGGILPLTSKKDHATVRLETSKPGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITGQRYAVHTEVVGTVSTTFQFRCLADFQYLTTQAFLPPGTPDLVSQARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLEKVKRAYEQVRRKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGSELQLFGLPVRRQMVFQLCDLGGASLQELVLGLPRKALCSPQGGWFRLSDLNRLRVRIKRYLSSRVAECVRTGSLEAVVGPEEGALSSSAMIKEAEARRGREVVWREDDFKKGAGVDRDQEGWPERQGGKAMTRRSSKRTSAGGGGRRSAEVMEGEGGVRRNVKRARRAALKQAEERQDEVSEWEDDRELDGGEGGSLRGGQEDEEGEEDEERGLRHLGDLLGQPMGGIKSSRGDRRTARAGRQSSGGRVEEVEDTDELGGNFVIPLTAGEMENASSIRLLGGYQGGDYSSSSSTEEDEGAESD
Sbjct: 1 MEILPTQRATRASDVLAPSEQREDSVNVKLTAGEQGICVASNICPAETCMEAEGGILPLTSKKDHATVRLETSKPGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITGQRYAVHTEVVGTVSTTFQFRCLADFQYLTTQAFLPPGTPDLVSQARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLEKVKRAYEQVRRKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGSELQLFGLPVRRQMVFQLCDLGGASLQELVLGLPRKALCSPQGGWFRLSDLNRLRVRIKRYLSSRVAECVRTGSLEAVVGPEEGALSSSAMIKEAEARRGREVVWREDDFKKGAGVDRDQEGWPERQGGKAMTRRSSKRTSAGGGGRRSAEVMEGEGGVRRNVKRARRAALKQAEERQDEVSEWEDDRELDGGEGGSLRGGQEDEEGEEDEERGLRHLGDLLGQPMGGIKSSRGDRRTARAGRQSSGGRVEEVEDTDELGGNFVIPLTAGEMENASSIRLLGGYQGGDYSSSSSTEEDEGAESD 754
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|939690570|ref|XP_014289267.1| (PREDICTED: general transcription factor 3C polypeptide 5 [Halyomorpha halys]) HSP 1 Score: 119.783 bits (299), Expect = 5.212e-25 Identity = 117/487 (24.02%), Postives = 197/487 (40.45%), Query Frame = 0
Query: 86 AVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRV-RRKQITGQR--YAVHTEVVGTVSTTFQFRCLADFQYLTTQAFLPPGTPDLVSQARL------------------EIVPPSFIPVAHAGNYAYVSLKSSALASHDTA----------RRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKY-------GQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALE--SQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKE-AGLEKVKRAYEQVRRKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGSELQLFGLPVRRQMVFQLCDLGGASLQELVLGLPR---KALCSPQGGWFRLSDLNRLRVRIKRYLS---SRVAECVRTGSL 525
++ P + + A+ LGG +S C+ R+L+ FRP D P + + ++L+++V RK G+ + E++G V T+F+F+ + DFQ+L +P G + +S++ L +PP+ + + +D A RR G + IPK P +PR ++ K+ GQ LE+++ F+ R +W + AL + F+ E L++ LL VVAY GP+R +WVR+GYDP DP +R YQ LD R + AGL + +A + + AK +D E E +V+ + + + LP RQM +Q CD+ ++ ++ LP+ A+C P+ GW N+ R I Y++ ++ A V +GSL
Sbjct: 14 CIEYPGIVNNVDKAIETLGGTSEISKVCSKMNRRLELRFRPNDVFCKPACGD-RYKTNGIILKIKVVNRKSENGEEIGHIRSCEILGRVITSFKFKSICDFQFLPMMQ-MPDGHIEDISESLLPKRVDGDHLRQWLGSPASYFLPPAAFSRVDTQSLNTYMFRRDTKDKNDQATGSLIGRTRKRRSGHAVFVSFNIPKVPI-----KPREKAIKFLEVKFLNGQQLEQIKKCFEE----------------------------------------------RPIWSKLALMCVTSFQHEQLKY----LLPVVAYYFVTGPFRVMWVRFGYDPRKDPNSRIYQTLDYRIRAPAGLLSLVKAKRSDANYLLPSKSTHSVAK--SVVITKDVETIEQSDVSDGRIKKDSYIYEPNCLPPARQMFYQYCDIKVPEIEAMLGRLPKVVGNAVCDPKHGWLPSGFDNQCRDIINIYVTKQLNKAALVVGSGSL 441
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|667250005|ref|XP_008561972.1| (PREDICTED: general transcription factor 3C polypeptide 5 [Galeopterus variegatus]) HSP 1 Score: 115.546 bits (288), Expect = 2.425e-23 Identity = 111/450 (24.67%), Postives = 175/450 (38.89%), Query Frame = 0
Query: 82 KRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITGQ-------RYAVHTEVVGTVSTTFQFRCLADFQYLTTQA--------------FLPPGTPDLVSQ-ARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLE----------KVKRAYEQVRRKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGSELQLF---GLPVRRQMVFQLCDLGGASLQELVL-GLPRKALCSPQGGW 495
+R++ V+ P + + LGG + +S T++L+ FRP D P+ + + S LLLR+R + +Q G + E+VG +ST ++F+ ++DFQYL L P Q L I PP F + +Y Y +T R+G Y P + ++R RR A+F E R A +Q+W R + + R +W R A+++ + L L +AY M GPWR LW+RYGYDP +P A+ YQ LD R + G++ K KR+ ++ G + G + P + + +F LP RQM +QLCDL LQ+++ + LC+ + GW
Sbjct: 22 RRMVCVEYPGVVRDVAKMLQTLGGEEGVSRIYADPTKRLELYFRPKDPYCHPVCAN-RFSTSSLLLRIRKKTRQRRGMLGTEAHPEVTLDMEIVGIISTIYKFQGMSDFQYLAVHTDTGGRYMSMYDKVLMLKPEKESFFHQELPLYIPPPIFSRLDTPADYFY---------RPETQHREG----YNNPTISGENLIGLSRARRPH----------NAIFVNFEDEVPLRP-------LEAAVQTWKRVCTNPLDRKVEEELRKLFDIRPIWSRNAIKANMSVHPDKLKIL--LPFMAYYMITGPWRSLWIRYGYDPRKNPEAKIYQVLDFRIR-CGMKYGYATSDMPVKAKRSTYNYSLPVTVRKMPGQLVTMHDLKQGLGPSGTASARKSTPNKYKLKDSVYIFREGALPPYRQMFYQLCDLNVEELQKIIHRNDGAENLCTERDGW 437
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|1121758469|ref|XP_019494728.1| (PREDICTED: general transcription factor 3C polypeptide 5 isoform X1 [Hipposideros armiger]) HSP 1 Score: 112.849 bits (281), Expect = 1.801e-22 Identity = 116/456 (25.44%), Postives = 179/456 (39.25%), Query Frame = 0
Query: 82 KRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQ---ITGQR----YAVHTEVVGTVSTTFQFRCLADFQYLTTQA--------------FLPPGTPDLVSQ-ARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGE--GTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLEKVKRAYEQVRRKGEGKRGDG------AAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGS--------ELQLF---GLPVRRQMVFQLCDLGGASLQELVL-GLPRKALCSPQGGW 495
+RL+ V+ P + + LGG + +S T++L+ FRP D P+ + + S LLLR++ + KQ + G E++G VST ++F+ ++DFQYL L P Q L I PP F + +Y Y DT R+G Y P + ++R RR A+F + T+ R+ C R + A ++ R +W R A+++ LL +AY M GPWR LW+RYGYDP +P A+ YQ LD R + G+ K Y + + KR K +A + K+G +G + R S + +F LP RQM +QLCDL LQ+++ + C+ + GW
Sbjct: 22 RRLVCVEYPGIVRDVSKMLPTLGGEEGVSRTYADPTKRLELYFRPKDPYCHPVCAN-RFSTSSLLLRIKRKTKQQKRVPGPEAHPEVTFDMEILGIVSTIYKFQGMSDFQYLAVHTEAGGRHMSMYNKVLMLKPQKEAFFHQELPLYIPPPIFSRLDTPVDYFY---------RPDTQHREG----YNNPTISGENLIGLSRARRPH----------NAIFVNFEDDEVPTQPLEAAVQTWRKVCTNPLDRKVEEELAKLFDI--------RPIWSRNAVKANISVH--PDKLKVLLPFMAYYMITGPWRSLWIRYGYDPRKNPDAKIYQVLDFRIR-CGM---KYGYASIDLPVKAKRSTYNYSLPITVTKTPNQAVTTIHDLKQGLGPSGTASARKSSPNKYKLKDSVYIFREGALPPYRQMFYQLCDLSVDELQKIIHRNDGAEDFCTERDGW 439
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|558196337|ref|XP_006104470.1| (PREDICTED: general transcription factor 3C polypeptide 5 isoform X2 [Myotis lucifugus]) HSP 1 Score: 112.464 bits (280), Expect = 2.370e-22 Identity = 109/441 (24.72%), Postives = 173/441 (39.23%), Query Frame = 0
Query: 75 PGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITG-------QRYAVHTEVVGTVSTTFQFRCLADFQYLTTQA--------------FLPPGTPDLVSQ-ARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLE----------KVKRAYEQVRRKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGSELQLF---GLPVRRQMVFQLCDLGGASLQELV 480
P E + +R++ V+ P + +S LGG + +S T++L+ FRP D P+ + + S LLLRVR + K+ G + +++G V T ++F+ ++DFQYL + P D Q L I PP F + +Y Y +T R+G Y P + ++R RR A+F G+ + A +Q+WTR + + R +W R A+ ++ LL +AY M GPWR LW+R+GYDP P A+ YQ LD R + G++ K KR+ K+ ++ D G G + + + +F LP RQM +QLCDL LQ+++
Sbjct: 12 PVELRREQRMVCVEYPGVVRDVSKMLSTLGGEEGVSRIYGDPTKRLELYFRPKDPYCHPVCAN-RFSTSSLLLRVRRKTKRQEGLPGPEARPQVTFDVDILGIVPTIYRFQGMSDFQYLAVHTEVGGVHKSMYDKVLMVRPEKEDFFHQEVPLCIPPPIFSRLDTPADYFY---------RPETQHREG----YNNPPISGENLIGLSRARRLH----------NAIFVNFEGDEVPEQ------PLEAAVQTWTRLCTNPMDRKVEEELRKLFDIRPIWSRNAVRAKMSVH--PDKLKVLLPFMAYYMITGPWRSLWIRFGYDPRRHPEAKIYQVLDFRIR-CGMKSGYTSNEMPVKAKRSTYNYSLPITVKKASNQLVTMQDLKQGLDPSGAAGTRKSASNKYKLKDSVYIFREGALPPYRQMFYQLCDLNVEELQKII 419
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|831234416|ref|XP_012663760.1| (PREDICTED: general transcription factor 3C polypeptide 5 [Otolemur garnettii]) HSP 1 Score: 110.538 bits (275), Expect = 8.959e-22 Identity = 116/464 (25.00%), Postives = 180/464 (38.79%), Query Frame = 0
Query: 69 RLETSKPGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITG-------QRYAVHTEVVGTVSTTFQFRCLADFQYLTTQA--------------FLPPGTPDLVSQ-ARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCK-RRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLE----------KVKRAYEQVRRKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGSELQLF---GLPVRRQMVFQLCDLGGASLQELVL-GLPRKALCSPQGGW 495
RL T+ P E + + ++ V+ P + VS LGG + +S +++L+ FRP D P+ + + S LLLR++ + +Q G E++G +ST ++F+ ++DFQYL L P Q L I PP F + +Y Y +T R+G Y P + ++R RR A+F E P K A + +W R + + R +W R A+++ LL +AY M GPWR LW+R+GYDP +P A+ YQ LD R + GL+ K KR+ K+ + G G P + + +F GLP RQM +QLCDL LQ+++ + LC+ + GW
Sbjct: 9 RLGTAVPVELRRERNMVCVEYPGVVRDVTKMVSTLGGEEGVSRIYADPSKRLELYFRPKDPYCHPVCAN-RFSTSSLLLRIKKKTRQRKGVLGTEAHPEVTFGMEILGIISTVYKFQGMSDFQYLAMHTEASGKHTSMYDKVLMLRPEKQGFFHQELPLYIPPPIFSRLDTPVDYFY---------RPETQHREG----YNNPPISGENLIGLSRARRPH----------NAIFVNFEDE--------VPSKPLEAAVHTWKRVCTNPMDRKVEEELRKLFEIRPVWSRNAVKANISVH--PDKLKVLLPYLAYYMITGPWRSLWIRFGYDPRKNPEAKIYQVLDFRIR-CGLKYGYAPNELPVKAKRSTYNYSLPITIKKTTSQLVTMHDLKQGLGPSGTPGVRKLAPSKYKLKDTVYIFREGGLPPYRQMFYQLCDLNVEELQKIIHRNDGAETLCTERDGW 437
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|926644034|ref|XP_013788268.1| (PREDICTED: general transcription factor 3C polypeptide 5-like [Limulus polyphemus]) HSP 1 Score: 109.768 bits (273), Expect = 1.371e-21 Identity = 114/451 (25.28%), Postives = 181/451 (40.13%), Query Frame = 0
Query: 82 KRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRK----------QITGQRYAVHTEVVGTVSTTFQFRCLADFQYLTTQ--------AFLPPGTPD-------LVSQARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWK------EAGLEKVKRAYEQVRRKGEGKRGDGAAAKEEEEAGA---QDGEGKEGEEVAGPQAGRTGSELQLFG-LPVRRQMVFQLCDLGGASLQELVLGLPRKAL--CSPQGGW 495
K+L+ V+ P + + LGG LS + +R+L+ +RP D + + + LL++V VR+K + Y +++G V TT++F+ + DFQYL + + +P P L +A + I PP F + NY Y + +SH + + P ++ R R+R + A+F + R P K + H S V + R +W R AL + E F+ L + +Y GPWR WVR+ YDP DP+A+ YQ LD R K + G++ + AY + GD A + + ++ E K GEE + R S + G LP RQM +QLCD+ +Q LV ++ C P+ GW
Sbjct: 9 KKLIGVEYPGIVKNVEKMLYSLGGEKSLSKVYSEPSRRLELRYRPND-IYCKCGHGDRFNTTNLLMKV-VRKKVKRAVDENSLSESSDCYTYRVDIIGIVDTTYRFKGMMDFQYLPMKINPGGQYRSLIPSLVPTGIQLCNWLQKEAEIFIQPPLFSRLDMPTNYHYRRDPTHRNSSHHLSTKHH-------------PPNIIGRTRKRRSGF--------AIFMNFEDK------RDVPQKPADQALKQIKLHHPESDIVEK--VQKLFQERPVWSRNALVAVMGCERTVIKFI--LPIFSYYHLTGPWRSFWVRFQYDPRKDPLAKQYQTLDFRVKLLGPSHDVGIKSKRSAYNYKLPTKFSRPGDRVATIQTQSFSLSRDEEPEDKHGEE----EMNRKLSYKFIPGLLPPCRQMFYQLCDIEEPKVQALVHQNDDQSPEECHPKEGW 422
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|803226488|ref|XP_011973552.1| (PREDICTED: general transcription factor 3C polypeptide 5 isoform X4 [Ovis aries musimon]) HSP 1 Score: 109.768 bits (273), Expect = 1.948e-21 Identity = 118/454 (25.99%), Postives = 179/454 (39.43%), Query Frame = 0
Query: 75 PGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITGQ-------RYAVHTEVVGTVSTTFQFRCLADFQYLTTQA--------------FLPPGTPDLVSQ-ARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTI-----HAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLE----------KVKRAYEQVR-----RKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVA---GPQAGRTGSELQLF---GLPVRRQMVFQLCDLGGASLQELV 480
P E + +R++ V+ P + + LGG + +S T++L+ FRP D P+ + + + LLLR++ + ++ +G + E +G VST F+F+ ++DFQYL L P Q L I PP F + +Y Y +T R+G Y P + ++R RR A+F V+ EG R A +Q+W + H A L R +W R AL++ + L L VAY M GPWR LW+R+GYDP P A+ YQ LD R + G++ K KR+ +K RG AA++ + G G G A P + + +F LP RQM +Q CDL LQ ++
Sbjct: 15 PVELRRERRMVCVEYPGVVRDVSKMLRTLGGEEGVSRIYADATKRLELYFRPKDPYCHPVCAN-RFSTNSLLLRIKRKTRRQSGALGPEARPQVTYDIESLGVVSTVFKFQGMSDFQYLAVHTEVDGRQVSMYDKVLMLKPQKESFFHQDLPLYIPPPIFSRLDTPVDYYY---------RPETQHREG----YNNPAVSGENLIGLSRARRPH----------NAIF--VNFEGDEVPERPM----EAAVQTWKKVCTNPVDHRVEAELRKL-----FDIRPIWSRNALKANISVHPDKLKIL--LPFVAYYMITGPWRSLWIRFGYDPRKRPEAKIYQVLDFRIR-CGMKYGYAPSDMPVKAKRSTYNYSLPITVKKTNPCRGPLAASQLVTMHDLKQGLGPSGSATAQKSSPNKYKLKDSVYIFQEGALPPYRQMFYQFCDLNVEELQRVI 430
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|554581307|ref|XP_005882179.1| (PREDICTED: general transcription factor 3C polypeptide 5 isoform X2 [Myotis brandtii]) HSP 1 Score: 108.997 bits (271), Expect = 2.537e-21 Identity = 108/441 (24.49%), Postives = 173/441 (39.23%), Query Frame = 0
Query: 75 PGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITG-------QRYAVHTEVVGTVSTTFQFRCLADFQYLTTQA--------------FLPPGTPDLVSQ-ARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLE----------KVKRAYEQVRRKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVAGPQAGRTGSELQLF---GLPVRRQMVFQLCDLGGASLQELV 480
P E + +R++ V+ P + +S LGG + +S T++L+ FRP D P+ + + S LLLRVR + K+ G + +++G V T ++F+ ++DFQYL + P D Q L I PP F + +Y Y +T R+G Y P + ++R RR A+F G+ + A +Q+WTR + + R +W R A+ ++ LL +AY M GPWR LW+R+GYDP P A+ YQ LD R + G++ K KR+ K+ ++ G+ G + + + +F LP RQM +QLCDL LQ+++
Sbjct: 12 PVELRREQRMVCVEYPGVVRDVSKMLSTLGGEEGVSRIYGDPTKRLELYFRPKDPYCHPVCAN-RFSTSSLLLRVRRKTKRQEGLPGPEARPQVTFDVDILGIVPTIYRFQGMSDFQYLAVHTEVGGVHKSMYDKVLMVRPEKEDFFHQELPLCIPPPIFSRLDTPADYFY---------RPETQHREG----YNNPPISGENLIGLSRARRLH----------NAIFVNFEGDEVPEQ------PLEAAVQTWTRLCTNPMDRKVEEELRKLFDIRPIWSRNAVRAKMSVH--PDKLKVLLPFMAYYMITGPWRSLWIRFGYDPRRHPEAKIYQVLDFRIR-CGMKSGYTSNEMPVKAKRSTYNYSLPITVKKASNQLVTMQDLKQGLGPSGEAGTRKSASNKYKLKDSVYIFREGALPPYRQMFYQLCDLNVEELQKII 419
BLAST of EWM27531.1 vs. NCBI_GenBank
Match: gi|1062992223|ref|XP_017911538.1| (PREDICTED: general transcription factor 3C polypeptide 5 isoform X3 [Capra hircus]) HSP 1 Score: 108.997 bits (271), Expect = 3.685e-21 Identity = 115/449 (25.61%), Postives = 178/449 (39.64%), Query Frame = 0
Query: 75 PGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITGQ-------RYAVHTEVVGTVSTTFQFRCLADFQYLTTQA--------------FLPPGTPDLVSQ-ARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLE----------KVKRAYEQVR-----RKGEGKRGDGAAAKEEEEAGAQDGEGKEGEEVA---GPQAGRTGSELQLF---GLPVRRQMVFQLCDLGGASLQELV 480
P E + +R++ V+ P + + LGG + +S T++L+ FRP D P+ + + + LLLR++ + ++ +G + E +G VST F+F+ ++DFQYL L P Q L I PP F + +Y Y +T R+G Y P + ++R RR A+F V+ EG R A +Q+W + + + R +W R AL++ + L L VAY M GPWR LW+R+GYDP P A+ YQ LD R + G++ K KR+ +K RG AA++ + G G G A P + + +F LP RQM +Q CDL LQ ++
Sbjct: 15 PVELRRERRMVCVEYPGVVRDVSKMLRTLGGEEGVSRIYADATKRLELYFRPKDPYCHPVCAN-RFSTNSLLLRIKRKTRRQSGALGPEARPQVTYDIESLGVVSTVFKFQGMSDFQYLAVHTEADGGQVSMYDKVLMLKPQKESFFHQDLPLYIPPPIFSRLDTPVDYYY---------RPETQHREG----YNNPAVSGENLIGLSRARRPH----------NAIF--VNFEGDEVPERPM----EAAVQTWKKVCTNPVDHRVEEELRKLFDIRPIWSRNALKANISVHPDKLKIL--LPFVAYYMITGPWRSLWIRFGYDPRKRPEAKIYQVLDFRIR-CGMKYGYAPSDMPVKAKRSTYNYSLPITVKKTNPCRGPLAASQLVTMHDLKQGLGPSGSATAQKSSPNKYKLKDSVYIFQEGALPPYRQMFYQFCDLNVEDLQRVI 430 The following BLAST results are available for this feature:
BLAST of EWM27531.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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