EWM27537.1, cds3102 (CDS) Nannochloropsis gaditana

Overview
NameEWM27537.1
Unique Namecds3102
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:733410..733543 +
Alignment locationCM002460.1:733705..735700 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27537.1
Productarginyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100015g52.6353.mrna
GeneARGRS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:733410..733543 +
CM002460.1supercontigCM002460.1:733705..735700 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0006420arginyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004814arginine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR001412aa-tRNA-synth_I_CS
IPR014729Rossmann-like_a/b/a_fold
IPR009080tRNAsynth_1a_anticodon-bd
IPR005148Arg-tRNA-synth_N
IPR008909DALR_anticod-bd
IPR001278Arg-tRNA-ligase
Homology
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|585109804|gb|EWM27537.1| (arginyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1457.2 bits (3771), Expect = 0.000e+0
Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 0
Query:    1 MRLMSRLFMLLFSQQLLSSSRLVALTATRSIRRGGRHLFKGQQHSHPQLGFLHIGAGFRPILPPSMSSSSFYPSCKGIFSFSSSGSSPPHKRSRTVQLSATTTPSEHLPSLLEASNYRRALTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
            MRLMSRLFMLLFSQQLLSSSRLVALTATRSIRRGGRHLFKGQQHSHPQLGFLHIGAGFRPILPPSMSSSSFYPSCKGIFSFSSSGSSPPHKRSRTVQLSATTTPSEHLPSLLEASNYRRALTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM
Sbjct:    1 MRLMSRLFMLLFSQQLLSSSRLVALTATRSIRRGGRHLFKGQQHSHPQLGFLHIGAGFRPILPPSMSSSSFYPSCKGIFSFSSSGSSPPHKRSRTVQLSATTTPSEHLPSLLEASNYRRALTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|551668615|ref|XP_005837067.1| (Arginyl-tRNA synthetase [Guillardia theta CCMP2712] >gi|428181222|gb|EKX50087.1| Arginyl-tRNA synthetase [Guillardia theta CCMP2712])

HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0
Identity = 347/598 (58.03%), Postives = 438/598 (73.24%), Query Frame = 0
Query:  112 LEASNYRRALTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
            LE    ++ L  +V  +L EAFG +    +PMV  A++PEFGDYQCN A++L+K++  KPRDVA+KL   L    Q   E  EIAGPGF+N+R+   ++  R++ M  D   RLG+P+    +RV+VDFSSPNIAKEMHVGHLRST+IGDTL R+ EFLGH VLRLNHVGDWGTQFGMLIT+L+++        +      +GDLV FYK AK RFD +E F+  SR+EVV LQ G+  +L  W  LC+ SR EFQ +YD L VRLEERGESFYN +L+ V+S L    LLKESEGARVVY++GY+ ++G+  PF+VQKSDGG+LY+TTDLAA RHR  +EKA+RILYVTDAGQ++HFDQ   +ARQA  VP  V L+HVPFGLVQGEDGKKFKTR+G+TV+L+DLLDEA+  A  DL +R E   +P  E+ ER+ARI+GL AVKYADLS+NRES+Y+FSY KML+LSGNTAPYMLYA+ARI  I RK  +      +   S+  ++L  PAEM LAR L+ L ELL  VE  LYPH LCEY+++L Q+FNQFYE C V NAP+ +  +SR ALC  TA  L+L L+LLGI+ +ER+
Sbjct:  107 LETVYVQQWLERKVTQALCEAFGEEVKDVNPMVAIASKPEFGDYQCNVAMSLSKKVGMKPRDVADKLLQRLHPLLQDVFEQPEIAGPGFLNLRLRKDYIGGRISRMTEDGE-RLGIPKTGNPKRVIVDFSSPNIAKEMHVGHLRSTIIGDTLCRLEEFLGHDVLRLNHVGDWGTQFGMLITYLREKG---FTAEKGLGDLQIGDLVNFYKQAKARFDEDEAFQTASRKEVVALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELLKESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTDAGQSTHFDQARCIARQAGWVPSHVSLEHVPFGLVQGEDGKKFKTRSGDTVKLRDLLDEAIVRASKDLRERLEADNKPFTEETERTARIVGLAAVKYADLSMNRESNYRFSYDKMLALSGNTAPYMLYAFARINGIRRKIGS-----EIKLDSSCKIILDHPAEMFLARHLVYLPELLLDVEKSLYPHRLCEYIFELSQRFNQFYENCPVANAPSEEEKKSRLALCSATANTLQLVLNLLGIDTVERL 695          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|551668617|ref|XP_005837068.1| (hypothetical protein GUITHDRAFT_200394 [Guillardia theta CCMP2712] >gi|428181223|gb|EKX50088.1| hypothetical protein GUITHDRAFT_200394 [Guillardia theta CCMP2712])

HSP 1 Score: 691.034 bits (1782), Expect = 0.000e+0
Identity = 345/598 (57.69%), Postives = 436/598 (72.91%), Query Frame = 0
Query:  112 LEASNYRRALTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
            LE    ++ L  +V  +L EAFG +    +PMV  A++PEFGDYQCN A++L+K++  KPRDVA+KL   L    Q   E  EIAGPGF+N+R+   ++  R++ M  D   RLG+P+    +RV+VDFSSPNIAKEMHVGHLRST+IGDTL R+ EFLGH VLRLNHVGDWGTQFGMLIT+L+++        +      +GDLV FYK AK RFD +E F+  SR+EVV LQ G+  +L  W  LC+ SR EFQ +YD L VRLEERGESFYN +L+ V+S L    LLKESEGARVVY++GY+ ++G+  PF+VQKSDGG+LY+TTDLAA RHR  +EKA+RILYVTDAGQ++HFDQ   +ARQA  VP  V L+HVPFGLVQGEDGKKFKTR+G+TV+L+DLLDEA+  A  DL +R E   +    + ER+ARI+GL AVKYADLS+NRES+Y+FSY KML+LSGNTAPYMLYA+ARI  I RK  +      +   S+  ++L  PAEM LAR L+ L ELL  VE  LYPH LCEY+++L Q+FNQFYE C V NAP+ +  +SR ALC  TA  L+L L+LLGI+ +ER+
Sbjct:   65 LETVYVQQWLERKVTQALCEAFGEEVKDVNPMVAIASKPEFGDYQCNVAMSLSKKVGMKPRDVADKLLQRLHPLLQDVFEQPEIAGPGFLNLRLRKDYIGGRISRMTEDGE-RLGIPKTGNPKRVIVDFSSPNIAKEMHVGHLRSTIIGDTLCRLEEFLGHDVLRLNHVGDWGTQFGMLITYLREKG---FTAEKGLGDLQIGDLVNFYKQAKARFDEDEAFQTASRKEVVALQAGDATSLSGWSILCEASRKEFQVVYDMLNVRLEERGESFYNNMLSDVISGLKEIELLKESEGARVVYVDGYKNKDGDPMPFLVQKSDGGYLYSTTDLAAIRHRVQKEKADRILYVTDAGQSTHFDQARCIARQAGWVPSHVSLEHVPFGLVQGEDGKKFKTRSGDTVKLRDLLDEAIVRASKDLRERLEADNK----ETERTARIVGLAAVKYADLSMNRESNYRFSYDKMLALSGNTAPYMLYAFARINGIRRKIGS-----EIKLDSSCKIILDHPAEMFLARHLVYLPELLLDVEKSLYPHRLCEYIFELSQRFNQFYENCPVANAPSEEEKKSRLALCSATANTLQLVLNLLGIDTVERL 649          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|299471588|emb|CBN79450.1| (Arginyl-tRNA Synthetase [Ectocarpus siliculosus])

HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 341/581 (58.69%), Postives = 428/581 (73.67%), Query Frame = 0
Query:  118 RRALTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAE----EGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVL 694
            R  +   VR++L +AFG     + P+VT AT+PEFGDYQCNAA+ALAK LK KPRDVA  L + L  R    CE  EIAGPGFIN+R+   FV +++ +M+ D   RLGVPR    +RVVVDFSSPNIAKEMHVGHLRST+IGDT+ RVLEF GH V+RLNHVGDWGTQFGMLI+HLK+  P+ + +G A  + ++GDLV FYK AK RFD ++ FK  +R EVV LQ G+  + +AW  LC+ SR  FQ IY  LGV LEERGESFYN +L  V+SDL++ GLL+ES+GA+VVYLEG+++R+G +QP +V+KSDGGF+Y+TTDLAA RHR   E+A+R+LYV D GQ SHF QVFQVAR+A   P  VQL+HVPFGLVQGEDGKKFKTRAGETV+L DLL EAVRIA + + KR E    EG Q    +LER ++++G+GAVKYADLS+NRES+Y+FSY KMLSL GNTAPYMLYA+AR+Q I +K   G     L   S   + +  P E  LAR L++L E+L+ +E +L+PH LC+YM++L  +FN+FYE C VN   T +   SR A C  TA V+
Sbjct:   28 RDTIVDAVREALVDAFGEKFRDSRPLVTSATKPEFGDYQCNAAMALAKPLKCKPRDVASSLAEKLGPRLSAICEAPEIAGPGFINLRLRDGFVAAKVKSMVGDGE-RLGVPRVTNPERVVVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFRGHDVVRLNHVGDWGTQFGMLISHLKEVAPEAIEDG-AEDKFNVGDLVTFYKEAKARFDEDDGFKEIARAEVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLLEESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQLQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQADEVELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEG-----LGDLSGTEISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNTGETEEFKGSRTAFCSGTADVI 601          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|748151083|ref|WP_039725410.1| (arginine--tRNA ligase [Lyngbya confervoides] >gi|746956203|gb|KIF13742.1| arginyl-tRNA synthetase [Aphanocapsa montana BDHKU210001] >gi|746982985|gb|KIF38677.1| arginyl-tRNA synthetase [Lyngbya confervoides BDU141951])

HSP 1 Score: 686.026 bits (1769), Expect = 0.000e+0
Identity = 348/590 (58.98%), Postives = 433/590 (73.39%), Query Frame = 0
Query:  121 LTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKR-AEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
            LT ++  +L +AFG D  G DP++ PA+ P+FGDYQ N A+ALAKRLK KPR +AE +   L+      CEP EIAGPGFIN+R+   ++E++L A+ SD+  RLGV   A  Q+V+VDFSSPNIAKEMHVGHLRST+IGD++ARVLEF+GH VLRLNHVGDWGTQFGMLITHL+   P+ L   E   Q D+GDLV FYK AK RFD +E FK+RSRQ VV LQ G+ +  QAW+ LC  SR EFQKIYD L + + ERGESFYNPLL+ V+ DL   GLL E +GA+VV+L+G+  + G+ QP I+QKS+GGF YATTDLAA R+R  ++ AERILYV DAGQA+HF+QVFQVA +A  VP +V+L HVPFGLVQGEDGKKFKTR+GETVRLKDLLDEAV  AR DL  R A E  Q   E ++  A  +G+GAVKYADLS NR S+Y FSY KML+L GNTAPY+LYAY R+Q I RKG      D  + G+   + L + +E  LA+ +++L E++  V  +LYP+ LC+Y+++L QKFNQFY+ C V  A  P    SR  LC LTA+ L+L L LLGI+VLERM
Sbjct:    8 LTQRLEQALVKAFGEDLAGTDPVLVPASNPKFGDYQANCAMALAKRLKDKPRAIAENIVANLD--VADICEPPEIAGPGFINLRLQTGYLEAQLQAIASDE--RLGVVLVASPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFVGHDVLRLNHVGDWGTQFGMLITHLRTACPEALTGSE---QVDIGDLVAFYKQAKHRFDEDEDFKSRSRQAVVELQSGDESASQAWQVLCDQSRKEFQKIYDRLDIAITERGESFYNPLLSDVVEDLKNQGLLVEDQGAQVVFLDGFTNKAGDPQPLIIQKSNGGFNYATTDLAAIRYRTQQDGAERILYVVDAGQANHFNQVFQVAGKAGWVPEKVELSHVPFGLVQGEDGKKFKTRSGETVRLKDLLDEAVSRARADLESRIATEERQESAEFIQSVAETVGIGAVKYADLSQNRTSNYIFSYDKMLALQGNTAPYLLYAYVRVQGISRKGGI----DWQNLGADAAIHLEDDSEFALAKHILQLDEVIAEVAQDLYPNRLCQYLFELSQKFNQFYDRCSVLQAEEPQRT-SRLMLCDLTARTLQLGLSLLGIQVLERM 585          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|922864886|gb|KOO32047.1| (arginyl-tRNA synthetase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0
Identity = 339/594 (57.07%), Postives = 431/594 (72.56%), Query Frame = 0
Query:  121 LTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGV--RLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKR-AEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNN--GENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
            L+ +VR +L EA+GP+   ADPM+ PA+RPEFGDYQCN A+ L K LK+KPRD+AE +   L  R +  CEP+EIAGPGF+N+++   F++ +L  M++D+  R  VP     QRV+VD+SSPNIAKEMHVGHLRST+IGD+L++VLEF GH VLRLNHVGDWGTQFGMLI HLKD+ P  LA  +   + D+ DLV FYK AK RFD +  F+  +R EVV LQ G   +L+AWR LC  S   F ++Y  LGV  RLE RGESFYNP L +V+  L  + LL+ESEGA+ V+L+GY  REGE QP IVQKSDGGF+Y+TTDLAA  HR  +E+AERILYVTDAGQ+ HF+QVF + R AS+VP  V L+HVPFGLV GEDGKKFKTR+GETV+L DLL EAVR A  DL  R   EG     + +E  +R +G+GAVKYADL++NR S+Y+F Y KML+L+GNTAP+MLYAYARI+ I R+     G      ++     ++L  PAE+ LAR L+KL ++++ VE+EL P  LCEY+++L  KFNQFYE+C V  A +  L RSR ALC L+A VL+  L LLGI+ LER+
Sbjct:   87 LSERVRSALVEAYGPEYADADPMLVPASRPEFGDYQCNVAMPLGKSLKSKPRDIAENIVARL--RLEDVCEPIEIAGPGFLNIKLRMPFMQEQLRRMIADE-ARCAVPLAVPTQRVIVDYSSPNIAKEMHVGHLRSTIIGDSLSKVLEFRGHSVLRLNHVGDWGTQFGMLILHLKDKAPGALAGTD---ELDISDLVTFYKEAKVRFDADAEFQTSARAEVVKLQAGAEDSLKAWRMLCTQSEKAFNEVYGLLGVDKRLETRGESFYNPRLGRVIETLREASLLRESEGAQCVFLDGYVNREGEPQPMIVQKSDGGFMYSTTDLAALAHRVGDERAERILYVTDAGQSQHFEQVFAIGRLASIVPSTVSLEHVPFGLVLGEDGKKFKTRSGETVKLMDLLSEAVRRAHTDLSSRITAEGRTEDADFVELVSRTVGIGAVKYADLAMNRNSNYRFEYDKMLALNGNTAPFMLYAYARIRGIQRRAAEKLGAGALDTARLQASEIMLDAPAELALARHLLKLADVVREVESELLPSKLCEYIFELSGKFNQFYESCPVMQAESAQLQRSRLALCGLSASVLKTSLGLLGIDTLERL 674          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|495586020|ref|WP_008310599.1| (arginine--tRNA ligase [Leptolyngbya sp. PCC 6406])

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 345/591 (58.38%), Postives = 424/591 (71.74%), Query Frame = 0
Query:  121 LTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAE-EGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQ-GSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
            LT ++  +L  AFGPD  G DP++ PA+ P+FGD+Q N A+ALAKRLK KPR +AEK+   LE      CEP EIAGPGFIN+R+   ++E++LNA+  D+  RLGV   A+ Q+V+VDFSSPNIAKEMHVGHLRST+IGD++ARVLEF GH VLRLNHVGDWGTQFGMLITHL+   P+ L  G      D+GDLV FYK AK+RFD +E FKARSR+ VV LQ G+     AW  LC  SR  FQ +YD L + L ERGESFYNP LA V+ +L A GLL   +GA+VV+LEG+  +EG+  P I+QKSDGGF YATTDLAA R+R  E+ A+RILYV DAGQ +HF QVFQVA +A  +P  V+L HVPFG+VQGEDGKKFKTR+GETVRLKDLLDEAV  +R DL  R + EG +   E ++  A  +G+GAVKYADLS NR S+Y FSY KML+L GNTAPY+LYAY R+Q I RKG        LSQ G+   V L + +E  LA+ L++L E++  V  +L P  LC+Y+++L QKFNQFY+ C V  A  P    SR  LC LTA+ L+L L LLGI VLERM
Sbjct:    8 LTTRLDQALVSAFGPDLAGTDPVLVPASNPKFGDFQANGAMALAKRLKDKPRAIAEKIVAHLE--VTDLCEPPEIAGPGFINLRLKATYIEAQLNALTGDE--RLGVAAVAQPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFAGHDVLRLNHVGDWGTQFGMLITHLQTACPEALTSG---GNVDIGDLVTFYKQAKERFDQDEDFKARSREAVVALQSGDATARAAWTALCNQSRKAFQTLYDRLDICLTERGESFYNPFLADVVQELAAQGLLVADQGAQVVFLEGFSNKEGDPLPLIIQKSDGGFNYATTDLAAIRYRTQEDGAQRILYVVDAGQGNHFAQVFQVAARAGWIPEGVELTHVPFGVVQGEDGKKFKTRSGETVRLKDLLDEAVTRSRVDLETRIQTEGREETEEFIQTVAETVGIGAVKYADLSQNRTSNYIFSYDKMLALQGNTAPYLLYAYVRVQGISRKGTID-----LSQLGTDAAVHLGDDSEFTLAKHLLQLDEVVAEVARDLLPSRLCQYLFELSQKFNQFYDRCSVLQAEEPQRT-SRLILCDLTARTLKLGLSLLGIAVLERM 585          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|504934107|ref|WP_015121209.1| (arginine--tRNA ligase [Rivularia sp. PCC 7116] >gi|427373696|gb|AFY57652.1| arginyl-tRNA synthetase [Rivularia sp. PCC 7116])

HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0
Identity = 337/591 (57.02%), Postives = 441/591 (74.62%), Query Frame = 0
Query:  121 LTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAE--EGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
            L  +++ +L +AFG +    DP++ PA++PEFGDYQ N AL+LAK+L  KPRD+A ++ + L+      CE  EIAGPGFIN+R+  +++E++LN++  D+  RLGVP   + +R VVDFSSPNIAKEMHVGHLRST+IGD +AR+LEF GH V+RLNHVGDWGTQFGMLIT+L++  P  L    A    D+GDLV FYK AK+RFD +E F+ +SR EVV LQ G   T+ AW+ LC+ SR EFQ IYD L +++EERGESFYNPLL +V+ DLD +GLL+ S+GA+VV+L+G++ R+G+  P IVQKSDGG+ YATTDLAA RHR  +E+A+R++YVTDAGQA+HF  VFQVA +A+ +P +V++ HVPFGLV GEDGKK KTR+GETVRL+DLLDEAV   R+DL KR +  EG +   + +   A+++G+ AVKYADLS NR  +YKFS+ KML+L GNTAPYMLYAYAR QSI RKG+     D  + G    +VL E AE  LA+ +++L E++  VE EL P+ LCEY+Y L +KFNQF+E C V  +  P +  SR ALC LTA+ L+L L+LLGIEVLERM
Sbjct:    8 LREKLKQALGKAFGDEYANTDPILVPASKPEFGDYQANMALSLAKKLGQKPRDIANQVVENLD--VSDICEKPEIAGPGFINLRLQTSYLEAQLNSIQKDE--RLGVPTAKQPKREVVDFSSPNIAKEMHVGHLRSTIIGDAIARILEFRGHDVIRLNHVGDWGTQFGMLITNLREVSPSALTTANA---LDIGDLVNFYKQAKKRFDEDEEFQEKSRNEVVKLQAGAEDTIHAWKLLCEQSRKEFQVIYDLLDIKVEERGESFYNPLLPEVVEDLDKAGLLESSDGAKVVFLKGFKNRDGQPLPLIVQKSDGGYNYATTDLAALRHRIQKEEAKRLIYVTDAGQANHFAGVFQVANRANWIPEDVEIVHVPFGLVLGEDGKKLKTRSGETVRLRDLLDEAVSRCREDLEKRLKEEEGREETEDFIANVAKVVGISAVKYADLSQNRTGNYKFSFDKMLALKGNTAPYMLYAYARTQSISRKGDI----DYENLGENIKIVLKEEAEFTLAKHILQLDEVIAEVEKELLPNRLCEYLYQLSEKFNQFFENCPVLKSEEP-IKTSRLALCDLTARTLKLGLNLLGIEVLERM 586          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|223997646|ref|XP_002288496.1| (arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335] >gi|220975604|gb|EED93932.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 326/582 (56.01%), Postives = 418/582 (71.82%), Query Frame = 0
Query:  140 ADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKD---ALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLN--AMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVR-LEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRAL------EEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKRAEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
             D MVTPAT+PEFGDYQCNAA++LAK     PR+ A K+ D   A+E       EP EIAGPGFIN+R    ++       AM ++  GRL +P     Q+++VDFSSPNIAKEMHVGHLRST+IGDTL+ +L F GH VLRLNHVGDWGTQFGML+ HL+D  P+ L + E++   DLGDLV  YK AK+RFDV+E FK R+R+ VV LQ G+   L AW +LC  SRVE+QKIYD L ++ L ERGESFYNP L  V+ DL++ GL  ESEGA  V+L+GY  R+G   P +V+KSDGGF YATTDLAA RHR         EKA+R+LYVTDAGQ+ HF+ VF  A++A  +   + L+HVPFGLVQGEDGKKF TR+G+TV+LKDLLDEAV+IA +D+  R +   Q L E L   A+ +G+GAVKYADLS+NRES+YKFSY +MLSL+GNTAPYMLYAYARI  I+RK      + ++       ++++  AE  L R L+KL ++L  VE +LYP+ LC+Y+++  QKFNQFYE C VNNA TP+L  SR +LC ++A  +RL ++LLGI+V+E++
Sbjct:   23 GDSMVTPATKPEFGDYQCNAAMSLAKSAGLNPRECASKIVDGLKAIEGFDTIMEEP-EIAGPGFINLRFKDGYLAGAAGKMAMDAEDGGRLAIPVTKNKQKIIVDFSSPNIAKEMHVGHLRSTIIGDTLSNLLTFSGHDVLRLNHVGDWGTQFGMLVEHLRDEFPEAL-DKESSKNVDLGDLVMLYKAAKKRFDVDEEFKVRAREGVVKLQAGDEEALAAWESLCAASRVEYQKIYDLLSIKGLNERGESFYNPYLVGVIEDLESQGLAVESEGATAVFLDGYTNRDGSPLPMLVRKSDGGFNYATTDLAAIRHRVQLDPSDGGEKADRVLYVTDAGQSQHFEMVFAAAKKAGFIAEPISLEHVPFGLVQGEDGKKFATRSGDTVKLKDLLDEAVKIAGEDMKSRMDNPDQELSEALNDVAKTVGIGAVKYADLSMNRESNYKFSYGRMLSLNGNTAPYMLYAYARICGIVRKATGQSEDTKVEWPEASDIIISHDAEKQLVRNLVKLPDILSEVETDLYPNRLCDYLFETSQKFNQFYENCSVNNAETPELKASRLSLCTVSAATIRLLMNLLGIQVVEKL 602          
BLAST of EWM27537.1 vs. NCBI_GenBank
Match: gi|515357744|ref|WP_016866226.1| (arginine--tRNA ligase [Fischerella muscicola])

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 334/590 (56.61%), Postives = 433/590 (73.39%), Query Frame = 0
Query:  121 LTYQVRDSLREAFGPDADGADPMVTPATRPEFGDYQCNAALALAKRLKAKPRDVAEKLKDALESRTQKWCEPLEIAGPGFINVRMTPAFVESRLNAMLSDQTGRLGVPRPARAQRVVVDFSSPNIAKEMHVGHLRSTVIGDTLARVLEFLGHGVLRLNHVGDWGTQFGMLITHLKDRHPDVLAEGEAAAQTDLGDLVEFYKTAKQRFDVEETFKARSRQEVVNLQRGEPATLQAWRTLCQLSRVEFQKIYDALGVRLEERGESFYNPLLAQVLSDLDASGLLKESEGARVVYLEGYQTREGEAQPFIVQKSDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQASLVPPEVQLKHVPFGLVQGEDGKKFKTRAGETVRLKDLLDEAVRIARDDLLKR-AEEGTQPLPEDLERSARIIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKGNNGENEDRLSQGSTPPVVLAEPAEMNLARQLIKLTELLQRVEAELYPHILCEYMYDLCQKFNQFYEACQVNNAPTPDLVRSRRALCVLTAQVLRLCLDLLGIEVLERM 709
            L  +++ +L  AFG +  G DP++  A+ P+FGDYQ N AL+LAKRL  +PR +A+ + D L+      C+P E+AGPGFIN+++T  ++E++L  M +D   RLGV +   ++R +VDFSSPNIAKEMHVGHLRST+IGD++AR+LEF GH VLRLNHVGDWGTQFGMLIT+L++ +P+ L    A    D+GDLV FYK AK+RFD +E F+ ++RQEVV LQ G   T+ AW+ LC+ SR EFQ IYD L ++++ERGESFYNPLL +V+ DL+ +GLL E +GA+ V+LEG+  +EGE  P IVQKSDGG+ YATTDLAA R+R  E+ A+RI+YVTDAGQA+HF QVFQV R+A  VP +V+L HVPFGLV GEDGKKFKTR+G+TVRL+DLLDEA+  AR DL  R  +EG Q   E     A+++G+ AVKYADLS NR S+Y FSY KMLSL GNTAPYMLYAY R Q I R+GN     D  + G+   ++L E  E+ LA+ L++L E++  VE +L P+ LCEY+Y L  KFN+FYE C V  +  P +  SR ALC LTA+ L+L L LLGI+VLERM
Sbjct:    8 LKEKLQQALVTAFGAEFAGVDPVLVAASNPKFGDYQANVALSLAKRLGQQPRVIAQAIVDQLD--VSDICKPPEVAGPGFINLKLTTQYLEAQLATMQAD--SRLGVAKAKTSKREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANA---LDIGDLVTFYKQAKKRFDEDEAFQEQARQEVVKLQAGAADTIHAWKLLCEQSRAEFQVIYDLLDIKVQERGESFYNPLLPKVVEDLEQAGLLVEDQGAKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAAIRYRIQEDHAKRIIYVTDAGQANHFAQVFQVVRKAGWVPDDVELVHVPFGLVLGEDGKKFKTRSGDTVRLRDLLDEAIARARADLENRLIQEGRQETEEFKANVAKVVGISAVKYADLSQNRTSNYVFSYDKMLSLKGNTAPYMLYAYVRTQGISREGNI----DFENLGTDAKILLQEDTELTLAKHLLQLDEIISDVEQDLLPNRLCEYLYQLSDKFNKFYENCPVLKSEEP-IRTSRLALCYLTARTLKLGLSLLGIQVLERM 585          
The following BLAST results are available for this feature:
BLAST of EWM27537.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109804|gb|EWM27537.1|0.000e+0100.00arginyl-trna synthetase [Nannochloropsis gaditana][more]
gi|551668615|ref|XP_005837067.1|0.000e+058.03Arginyl-tRNA synthetase [Guillardia theta CCMP2712... [more]
gi|551668617|ref|XP_005837068.1|0.000e+057.69hypothetical protein GUITHDRAFT_200394 [Guillardia... [more]
gi|299471588|emb|CBN79450.1|0.000e+058.69Arginyl-tRNA Synthetase [Ectocarpus siliculosus][more]
gi|748151083|ref|WP_039725410.1|0.000e+058.98arginine--tRNA ligase [Lyngbya confervoides] >gi|7... [more]
gi|922864886|gb|KOO32047.1|0.000e+057.07arginyl-tRNA synthetase [Chrysochromulina sp. CCMP... [more]
gi|495586020|ref|WP_008310599.1|0.000e+058.38arginine--tRNA ligase [Leptolyngbya sp. PCC 6406][more]
gi|504934107|ref|WP_015121209.1|0.000e+057.02arginine--tRNA ligase [Rivularia sp. PCC 7116] >gi... [more]
gi|223997646|ref|XP_002288496.1|0.000e+056.01arginyl-trna synthetase [Thalassiosira pseudonana ... [more]
gi|515357744|ref|WP_016866226.1|0.000e+056.61arginine--tRNA ligase [Fischerella muscicola][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3110rna3110Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications