EWM27536.1, cds3099 (CDS) Nannochloropsis gaditana

Overview
NameEWM27536.1
Unique Namecds3099
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:729683..730579 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27536.1
Productmethyltransferase type 11
Orig transcript idgnl|cribi|Naga_100015g55.6352.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:729683..730579 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|585109803|gb|EWM27536.1| (methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
Query:    1 MQDNGSPSHPCEEQAMVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLKA 298
            MQDNGSPSHPCEEQAMVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLKA
Sbjct:    1 MQDNGSPSHPCEEQAMVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLKA 298          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|723285378|gb|KHD06276.1| (hypothetical protein OT06_42630 [Candidatus Thiomargarita nelsonii])

HSP 1 Score: 167.548 bits (423), Expect = 5.384e-47
Identity = 86/230 (37.39%), Postives = 128/230 (55.65%), Query Frame = 0
Query:   22 AHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARF 251
            +HY  VA  YN A+F+    DYQ WL++ +   LQ     +VVD+G GTG F++A Y + E  + +L VD S  +L  A   +  ++   AD +SF     Y   YD+ L  E++HH    +L  ++ G  QQLR GG L+ +TRP    HYPFF AA   W   Q D  +Y Q  + AGF V+    DY + +P ++W  M+++ FWST   F+D E+  GL E++ ++
Sbjct:    9 SHYAKVATHYNHAFFHGGSIDYQNWLLQKVLHHLQLKTSDQVVDIGCGTGTFTSALYDQIEFNKEILGVDLSPDMLNHANT-LRGIKTHCADAVSFSQSHEYQ--YDKALMIEIIHHIDLADLPRLYKGISQQLRKGGILMTITRP-TIVHYPFFQAALDIWSQFQPDSELYVQLQQEAGFSVNCQTYDYPIQIPKTQWFEMIKNSFWSTFSHFNDEELQAGLVELENKY 234          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|873218197|emb|CEM39991.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 159.458 bits (402), Expect = 1.300e-42
Identity = 85/227 (37.44%), Postives = 124/227 (54.63%), Query Frame = 0
Query:   23 HYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGF-DVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIK 248
            HYD  A   +  +   D TD+Q   +  L   L   P  RVVDMG G G F++  +R   L    +CVDPS  + A+AQ+  S VE +  D ++F   T   ++YDRI FKEVVHH P  +L  +F    +QL PGG +++ TRP  + H P F  A + W A Q  E ++   LR  GF DV+V+   + + +P   WL++  SRFWS     +D EM +G+ +++
Sbjct:   23 HYDAAAAIKDNCYCIGDSTDWQSANIVEL---LDLKPGHRVVDMGAGDGAFASVIHRRASLRRRTVCVDPSANMTAKAQQRPS-VEAVNEDCITFT--TRPEESYDRIFFKEVVHHLPIADLPSIFRNVHKQLTPGGVVLIATRPKSADHVPIFPRAREVWSANQPAEEVFLGALRDGGFDDVTVEKRGFAMRVPRDEWLALCRSRFWSCFAPLTDDEMEKGMADLE 243          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|552833281|ref|XP_005848521.1| (hypothetical protein CHLNCDRAFT_145017 [Chlorella variabilis] >gi|307108178|gb|EFN56419.1| hypothetical protein CHLNCDRAFT_145017 [Chlorella variabilis])

HSP 1 Score: 160.614 bits (405), Expect = 1.369e-41
Identity = 87/229 (37.99%), Postives = 124/229 (54.15%), Query Frame = 0
Query:   14 QAMVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPD--SRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEM 240
            QA  +    HY DVA  Y  A+FY    +Y+ W++  L  R    PD  +++VD+GGGTGNF+ A      +   VLCVD    +L +A  H   VEPLL D + F  + A +  Y  +L KE+VHH P  ++  ++AG  +QL PGG  V +TRP     YP F  A + W+  Q  ++++   ++ AGF V V   DY   +P + WL M+ SRFWST    S  E+
Sbjct:   18 QAAPAAGGGHYTDVAASYEAAFFYSS-PEYRDWILERL-LRHFGLPDEEAQIVDLGGGTGNFTQALALAARVRRRVLCVDAFAEMLQKALAH-DRVEPLLLDAVQFAALPAESMRYSHVLLKELVHHIPAADVPAMYAGLHRQLAPGGVAVTITRP-QQVDYPLFRRAREIWREHQPHQSVFTAAMQAAGFSVEVHAHDYAAQLPKATWLGMMRSRFWSTFSHCSQQEL 242          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|1094117654|ref|WP_071107153.1| (class I SAM-dependent methyltransferase [Moorea producens] >gi|1092225657|gb|AOY83999.1| SAM-dependent methyltransferase [Moorea producens JHB])

HSP 1 Score: 143.665 bits (361), Expect = 6.346e-38
Identity = 87/286 (30.42%), Postives = 140/286 (48.95%), Query Frame = 0
Query:   16 MVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQA----QRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLK 297
            M S+ + HY  +   Y+  W Y +  DY +++   +   L+      +VD+G GTG F+ A  +E +L+ P++CVDPS  +L+Q     Q  +  V     D ++FV  T+    Y+++  KE +HH    EL  +F+  FQ+L  GG  +++  P  +  YP F AA + ++  Q +       L   GF+VSVD  +Y  ++P  ++L MVE+R+ S L  F D ++ EGL EI  ++ + S                            + FPDR VFIT  K
Sbjct:    1 MSSSNQKHYKRIGSIYDDLWSYSE--DYIRFMGLKISEYLRLTSTDSLVDLGCGTGLFTQAIPKEIQLDNPIICVDPSEEMLSQIPLSPQYQIRAV-----DAITFVSETS---GYNKVYMKEAIHHIDNKEL--LFSSLFQKLTSGGMFLLILLP-PTIEYPLFKAALERYERGQPNYNDLTSLLEKVGFNVSVDFVEYLQSIPKEQYLKMVENRYMSLLSFFDDQQLEEGLAEISEKYAQQS---------------------------ILEFPDRFVFITASK 246          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|495462195|ref|WP_008186887.1| (class I SAM-dependent methyltransferase [Moorea producens] >gi|332351889|gb|EGJ31467.1| methyltransferase domain protein [Moorea producens 3L] >gi|1130586487|gb|OLT68722.1| SAM-dependent methyltransferase [Moorea producens PAL])

HSP 1 Score: 143.28 bits (360), Expect = 1.070e-37
Identity = 85/282 (30.14%), Postives = 140/282 (49.65%), Query Frame = 0
Query:   16 MVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLK 297
            M S+ + HY  +   Y+  W Y +  DY +++   +   L+      +VD+G GTG F+ A  +E +L+ P++CVDPS  +L+Q   +  + +    D ++FV  T+    Y+++  KE +HH    EL  +F+  FQ+L  GG  +++  P  +  YP F AA + ++  Q +       L   GF+VSVD  +Y  ++P  ++L MVE+R+ S L  F D ++ EGL EI  ++ + S                            + FPDR VFIT  K
Sbjct:    1 MSSSNQKHYKKIGSIYDDLWSYSE--DYIRFMGLKISEYLRLTSTDILVDLGCGTGLFTQAIPKEIQLDNPMICVDPSEEMLSQIPLN-PQYQIRAVDAITFVSETS---GYNKVYMKEAIHHIDNKEL--LFSSLFQKLTSGGMFLLILLP-PTIEYPLFKAALERYERGQPNYNDLTSLLEKVGFNVSVDFVEYIQSIPKEQYLKMVENRYMSLLSFFDDQQLEEGLAEISEKYAQQS---------------------------ILEFPDRFVFITASK 246          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|664548692|ref|WP_031063880.1| (SAM-dependent methyltransferase [Streptomyces ochraceiscleroticus])

HSP 1 Score: 140.584 bits (353), Expect = 1.544e-36
Identity = 90/281 (32.03%), Postives = 135/281 (48.04%), Query Frame = 0
Query:   22 AHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQ-AQRHVSEVEPLLADGLSFVGMTA---YNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLKA 298
             HY+++A EY++ W Y  G DY  W+   +   L  +P +R+ D+G GTG F+    R+     P+LCVDPS A+L Q      S + P++A         A   Y Q  D I  KE VHH   D+      G   +L PGGRL+V+  P  S  YP F AA   ++ +Q D       LR AG D  + H +Y + +   ++L MV +R+ S L  FSD+E+ +G++E++            + H E                P + FPDR  F+ G ++
Sbjct:    8 GHYEELAAEYDEHWVY--GPDYISWMSARIVDALHLSPTARIADIGAGTGLFAKEVARQLGPHHPILCVDPSEAMLRQLGTPPPSGLTPIVASAEDIAEGRAGLPYEQ-LDAIWLKESVHHV--DDQARTLRGLADRLAPGGRLLVVMLP-ASIQYPLFQAALDRFEELQPDPANIQAHLRAAGLDTGLTHVEYELRINRDKYLGMVRARYMSLLSTFSDSEIEKGIEEMR------------SAHPE----------------PVLVFPDRFAFVVGQRS 254          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|1132229747|ref|WP_075897928.1| (SAM-dependent methyltransferase [Moorea bouillonii] >gi|1130576747|gb|OLT58983.1| SAM-dependent methyltransferase [Moorea bouillonii PNG])

HSP 1 Score: 138.658 bits (348), Expect = 4.908e-36
Identity = 84/286 (29.37%), Postives = 140/286 (48.95%), Query Frame = 0
Query:   16 MVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQA----QRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLK 297
            M S+ + HY  + + Y+  W Y +  DY +++   +   L+      +VD+G GTG F+ +  +E +L+ P++CVDPS+ +L+Q     Q  +  V     D ++FV  T+    Y+++  KE +HH    EL  +F+  FQ+L  GG  +++  P  +  YP F  A + ++  Q +       L   GF+VSVD  +Y  ++P  ++L MV +R+ S L  F D ++ EGL EI  ++ + S                            + FPDR VFIT  K
Sbjct:    1 MSSSNQKHYKRIGRIYDDLWSYSE--DYIRFMGLKIIEYLRLTSTDSLVDLGCGTGLFTQSIPKEIQLDNPIICVDPSQEMLSQIPLSPQYQIRAV-----DAITFVSETS---GYNKVYMKEAIHHIDNKEL--LFSSLFQKLTSGGIFLLILLP-PTIEYPLFKKALERYERRQPNYNDLTSLLEKVGFNVSVDFVEYLQSIPKEQYLKMVANRYMSLLSLFDDQQLQEGLAEISEKYAQQS---------------------------ILEFPDRFVFITASK 246          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|759892241|ref|WP_043578837.1| (SAM-dependent methyltransferase [Actinopolyspora erythraea])

HSP 1 Score: 138.658 bits (348), Expect = 5.636e-36
Identity = 82/229 (35.81%), Postives = 120/229 (52.40%), Query Frame = 0
Query:   22 AHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAV--QQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIK 248
            AHYD +A  +   W Y     +  W+  +L  RLQ   D+ + D+G G G ++AA     +L  P+ CV+PS A+ A+     + V P+ A        T     YD +  KE +HH P DE   V AG F++LRPGGR++++T P    H P F AAH+    V  +      A EL   G  V++ +  + VTMP  RW+ MV +R+ S L  F+D E+AEG+  I+
Sbjct:    5 AHYDALAGTFTDHWAYSRA--FVAWMTTALLDRLQPHADAALADVGSGPGLYAAALAERAQLAHPIDCVEPSPAMRAELP---TTVTPVAATAEHIA--TGPEATYDGLWVKEALHHVPHDERPAVLAGLFRRLRPGGRMLLVTWPRRVEH-PLFPAAHEHLARVADRLPPGNLADELDQLGGQVTLTYDSFLVTMPTERWIDMVRARYLSLLARFTDDELAEGIAHIR 225          
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|693609486|gb|KGI79348.1| (hypothetical protein IL38_23875 [Actinopolyspora erythraea])

HSP 1 Score: 138.658 bits (348), Expect = 6.167e-36
Identity = 82/229 (35.81%), Postives = 120/229 (52.40%), Query Frame = 0
Query:   22 AHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAV--QQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIK 248
            AHYD +A  +   W Y     +  W+  +L  RLQ   D+ + D+G G G ++AA     +L  P+ CV+PS A+ A+     + V P+ A        T     YD +  KE +HH P DE   V AG F++LRPGGR++++T P    H P F AAH+    V  +      A EL   G  V++ +  + VTMP  RW+ MV +R+ S L  F+D E+AEG+  I+
Sbjct:    6 AHYDALAGTFTDHWAYSRA--FVAWMTTALLDRLQPHADAALADVGSGPGLYAAALAERAQLAHPIDCVEPSPAMRAELP---TTVTPVAATAEHIA--TGPEATYDGLWVKEALHHVPHDERPAVLAGLFRRLRPGGRMLLVTWPRRVEH-PLFPAAHEHLARVADRLPPGNLADELDQLGGQVTLTYDSFLVTMPTERWIDMVRARYLSLLARFTDDELAEGIAHIR 226          
The following BLAST results are available for this feature:
BLAST of EWM27536.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109803|gb|EWM27536.1|0.000e+0100.00methyltransferase type 11 [Nannochloropsis gaditan... [more]
gi|723285378|gb|KHD06276.1|5.384e-4737.39hypothetical protein OT06_42630 [Candidatus Thioma... [more]
gi|873218197|emb|CEM39991.1|1.300e-4237.44unnamed protein product [Vitrella brassicaformis C... [more]
gi|552833281|ref|XP_005848521.1|1.369e-4137.99hypothetical protein CHLNCDRAFT_145017 [Chlorella ... [more]
gi|1094117654|ref|WP_071107153.1|6.346e-3830.42class I SAM-dependent methyltransferase [Moorea pr... [more]
gi|495462195|ref|WP_008186887.1|1.070e-3730.14class I SAM-dependent methyltransferase [Moorea pr... [more]
gi|664548692|ref|WP_031063880.1|1.544e-3632.03SAM-dependent methyltransferase [Streptomyces ochr... [more]
gi|1132229747|ref|WP_075897928.1|4.908e-3629.37SAM-dependent methyltransferase [Moorea bouillonii... [more]
gi|759892241|ref|WP_043578837.1|5.636e-3635.81SAM-dependent methyltransferase [Actinopolyspora e... [more]
gi|693609486|gb|KGI79348.1|6.167e-3635.81hypothetical protein IL38_23875 [Actinopolyspora e... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3107rna3107Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications