EWM27536.1, cds3099 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|585109803|gb|EWM27536.1| (methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
Query: 1 MQDNGSPSHPCEEQAMVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLKA 298
MQDNGSPSHPCEEQAMVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLKA
Sbjct: 1 MQDNGSPSHPCEEQAMVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLKA 298
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|723285378|gb|KHD06276.1| (hypothetical protein OT06_42630 [Candidatus Thiomargarita nelsonii]) HSP 1 Score: 167.548 bits (423), Expect = 5.384e-47 Identity = 86/230 (37.39%), Postives = 128/230 (55.65%), Query Frame = 0
Query: 22 AHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARF 251
+HY VA YN A+F+ DYQ WL++ + LQ +VVD+G GTG F++A Y + E + +L VD S +L A + ++ AD +SF Y YD+ L E++HH +L ++ G QQLR GG L+ +TRP HYPFF AA W Q D +Y Q + AGF V+ DY + +P ++W M+++ FWST F+D E+ GL E++ ++
Sbjct: 9 SHYAKVATHYNHAFFHGGSIDYQNWLLQKVLHHLQLKTSDQVVDIGCGTGTFTSALYDQIEFNKEILGVDLSPDMLNHANT-LRGIKTHCADAVSFSQSHEYQ--YDKALMIEIIHHIDLADLPRLYKGISQQLRKGGILMTITRP-TIVHYPFFQAALDIWSQFQPDSELYVQLQQEAGFSVNCQTYDYPIQIPKTQWFEMIKNSFWSTFSHFNDEELQAGLVELENKY 234
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|873218197|emb|CEM39991.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 159.458 bits (402), Expect = 1.300e-42 Identity = 85/227 (37.44%), Postives = 124/227 (54.63%), Query Frame = 0
Query: 23 HYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGF-DVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIK 248
HYD A + + D TD+Q + L L P RVVDMG G G F++ +R L +CVDPS + A+AQ+ S VE + D ++F T ++YDRI FKEVVHH P +L +F +QL PGG +++ TRP + H P F A + W A Q E ++ LR GF DV+V+ + + +P WL++ SRFWS +D EM +G+ +++
Sbjct: 23 HYDAAAAIKDNCYCIGDSTDWQSANIVEL---LDLKPGHRVVDMGAGDGAFASVIHRRASLRRRTVCVDPSANMTAKAQQRPS-VEAVNEDCITFT--TRPEESYDRIFFKEVVHHLPIADLPSIFRNVHKQLTPGGVVLIATRPKSADHVPIFPRAREVWSANQPAEEVFLGALRDGGFDDVTVEKRGFAMRVPRDEWLALCRSRFWSCFAPLTDDEMEKGMADLE 243
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|552833281|ref|XP_005848521.1| (hypothetical protein CHLNCDRAFT_145017 [Chlorella variabilis] >gi|307108178|gb|EFN56419.1| hypothetical protein CHLNCDRAFT_145017 [Chlorella variabilis]) HSP 1 Score: 160.614 bits (405), Expect = 1.369e-41 Identity = 87/229 (37.99%), Postives = 124/229 (54.15%), Query Frame = 0
Query: 14 QAMVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPD--SRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEM 240
QA + HY DVA Y A+FY +Y+ W++ L R PD +++VD+GGGTGNF+ A + VLCVD +L +A H VEPLL D + F + A + Y +L KE+VHH P ++ ++AG +QL PGG V +TRP YP F A + W+ Q ++++ ++ AGF V V DY +P + WL M+ SRFWST S E+
Sbjct: 18 QAAPAAGGGHYTDVAASYEAAFFYSS-PEYRDWILERL-LRHFGLPDEEAQIVDLGGGTGNFTQALALAARVRRRVLCVDAFAEMLQKALAH-DRVEPLLLDAVQFAALPAESMRYSHVLLKELVHHIPAADVPAMYAGLHRQLAPGGVAVTITRP-QQVDYPLFRRAREIWREHQPHQSVFTAAMQAAGFSVEVHAHDYAAQLPKATWLGMMRSRFWSTFSHCSQQEL 242
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|1094117654|ref|WP_071107153.1| (class I SAM-dependent methyltransferase [Moorea producens] >gi|1092225657|gb|AOY83999.1| SAM-dependent methyltransferase [Moorea producens JHB]) HSP 1 Score: 143.665 bits (361), Expect = 6.346e-38 Identity = 87/286 (30.42%), Postives = 140/286 (48.95%), Query Frame = 0
Query: 16 MVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQA----QRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLK 297
M S+ + HY + Y+ W Y + DY +++ + L+ +VD+G GTG F+ A +E +L+ P++CVDPS +L+Q Q + V D ++FV T+ Y+++ KE +HH EL +F+ FQ+L GG +++ P + YP F AA + ++ Q + L GF+VSVD +Y ++P ++L MVE+R+ S L F D ++ EGL EI ++ + S + FPDR VFIT K
Sbjct: 1 MSSSNQKHYKRIGSIYDDLWSYSE--DYIRFMGLKISEYLRLTSTDSLVDLGCGTGLFTQAIPKEIQLDNPIICVDPSEEMLSQIPLSPQYQIRAV-----DAITFVSETS---GYNKVYMKEAIHHIDNKEL--LFSSLFQKLTSGGMFLLILLP-PTIEYPLFKAALERYERGQPNYNDLTSLLEKVGFNVSVDFVEYLQSIPKEQYLKMVENRYMSLLSFFDDQQLEEGLAEISEKYAQQS---------------------------ILEFPDRFVFITASK 246
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|495462195|ref|WP_008186887.1| (class I SAM-dependent methyltransferase [Moorea producens] >gi|332351889|gb|EGJ31467.1| methyltransferase domain protein [Moorea producens 3L] >gi|1130586487|gb|OLT68722.1| SAM-dependent methyltransferase [Moorea producens PAL]) HSP 1 Score: 143.28 bits (360), Expect = 1.070e-37 Identity = 85/282 (30.14%), Postives = 140/282 (49.65%), Query Frame = 0
Query: 16 MVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLK 297
M S+ + HY + Y+ W Y + DY +++ + L+ +VD+G GTG F+ A +E +L+ P++CVDPS +L+Q + + + D ++FV T+ Y+++ KE +HH EL +F+ FQ+L GG +++ P + YP F AA + ++ Q + L GF+VSVD +Y ++P ++L MVE+R+ S L F D ++ EGL EI ++ + S + FPDR VFIT K
Sbjct: 1 MSSSNQKHYKKIGSIYDDLWSYSE--DYIRFMGLKISEYLRLTSTDILVDLGCGTGLFTQAIPKEIQLDNPMICVDPSEEMLSQIPLN-PQYQIRAVDAITFVSETS---GYNKVYMKEAIHHIDNKEL--LFSSLFQKLTSGGMFLLILLP-PTIEYPLFKAALERYERGQPNYNDLTSLLEKVGFNVSVDFVEYIQSIPKEQYLKMVENRYMSLLSFFDDQQLEEGLAEISEKYAQQS---------------------------ILEFPDRFVFITASK 246
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|664548692|ref|WP_031063880.1| (SAM-dependent methyltransferase [Streptomyces ochraceiscleroticus]) HSP 1 Score: 140.584 bits (353), Expect = 1.544e-36 Identity = 90/281 (32.03%), Postives = 135/281 (48.04%), Query Frame = 0
Query: 22 AHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQ-AQRHVSEVEPLLADGLSFVGMTA---YNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLKA 298
HY+++A EY++ W Y G DY W+ + L +P +R+ D+G GTG F+ R+ P+LCVDPS A+L Q S + P++A A Y Q D I KE VHH D+ G +L PGGRL+V+ P S YP F AA ++ +Q D LR AG D + H +Y + + ++L MV +R+ S L FSD+E+ +G++E++ + H E P + FPDR F+ G ++
Sbjct: 8 GHYEELAAEYDEHWVY--GPDYISWMSARIVDALHLSPTARIADIGAGTGLFAKEVARQLGPHHPILCVDPSEAMLRQLGTPPPSGLTPIVASAEDIAEGRAGLPYEQ-LDAIWLKESVHHV--DDQARTLRGLADRLAPGGRLLVVMLP-ASIQYPLFQAALDRFEELQPDPANIQAHLRAAGLDTGLTHVEYELRINRDKYLGMVRARYMSLLSTFSDSEIEKGIEEMR------------SAHPE----------------PVLVFPDRFAFVVGQRS 254
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|1132229747|ref|WP_075897928.1| (SAM-dependent methyltransferase [Moorea bouillonii] >gi|1130576747|gb|OLT58983.1| SAM-dependent methyltransferase [Moorea bouillonii PNG]) HSP 1 Score: 138.658 bits (348), Expect = 4.908e-36 Identity = 84/286 (29.37%), Postives = 140/286 (48.95%), Query Frame = 0
Query: 16 MVSNQEAHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQA----QRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAVQQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIKARFLRDSQSASSTTHREQGDHKGEALRCEERNDPPISFPDRLVFITGLK 297
M S+ + HY + + Y+ W Y + DY +++ + L+ +VD+G GTG F+ + +E +L+ P++CVDPS+ +L+Q Q + V D ++FV T+ Y+++ KE +HH EL +F+ FQ+L GG +++ P + YP F A + ++ Q + L GF+VSVD +Y ++P ++L MV +R+ S L F D ++ EGL EI ++ + S + FPDR VFIT K
Sbjct: 1 MSSSNQKHYKRIGRIYDDLWSYSE--DYIRFMGLKIIEYLRLTSTDSLVDLGCGTGLFTQSIPKEIQLDNPIICVDPSQEMLSQIPLSPQYQIRAV-----DAITFVSETS---GYNKVYMKEAIHHIDNKEL--LFSSLFQKLTSGGIFLLILLP-PTIEYPLFKKALERYERRQPNYNDLTSLLEKVGFNVSVDFVEYLQSIPKEQYLKMVANRYMSLLSLFDDQQLQEGLAEISEKYAQQS---------------------------ILEFPDRFVFITASK 246
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|759892241|ref|WP_043578837.1| (SAM-dependent methyltransferase [Actinopolyspora erythraea]) HSP 1 Score: 138.658 bits (348), Expect = 5.636e-36 Identity = 82/229 (35.81%), Postives = 120/229 (52.40%), Query Frame = 0
Query: 22 AHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAV--QQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIK 248
AHYD +A + W Y + W+ +L RLQ D+ + D+G G G ++AA +L P+ CV+PS A+ A+ + V P+ A T YD + KE +HH P DE V AG F++LRPGGR++++T P H P F AAH+ V + A EL G V++ + + VTMP RW+ MV +R+ S L F+D E+AEG+ I+
Sbjct: 5 AHYDALAGTFTDHWAYSRA--FVAWMTTALLDRLQPHADAALADVGSGPGLYAAALAERAQLAHPIDCVEPSPAMRAELP---TTVTPVAATAEHIA--TGPEATYDGLWVKEALHHVPHDERPAVLAGLFRRLRPGGRMLLVTWPRRVEH-PLFPAAHEHLARVADRLPPGNLADELDQLGGQVTLTYDSFLVTMPTERWIDMVRARYLSLLARFTDDELAEGIAHIR 225
BLAST of EWM27536.1 vs. NCBI_GenBank
Match: gi|693609486|gb|KGI79348.1| (hypothetical protein IL38_23875 [Actinopolyspora erythraea]) HSP 1 Score: 138.658 bits (348), Expect = 6.167e-36 Identity = 82/229 (35.81%), Postives = 120/229 (52.40%), Query Frame = 0
Query: 22 AHYDDVAKEYNKAWFYEDGTDYQQWLVRSLQTRLQAAPDSRVVDMGGGTGNFSAAFYRECELEEPVLCVDPSRALLAQAQRHVSEVEPLLADGLSFVGMTAYNQAYDRILFKEVVHHFPRDELGVVFAGTFQQLRPGGRLVVMTRPHDSTHYPFFHAAHQTWKAV--QQDETIYAQELRTAGFDVSVDHADYTVTMPLSRWLSMVESRFWSTLHGFSDAEMAEGLKEIK 248
AHYD +A + W Y + W+ +L RLQ D+ + D+G G G ++AA +L P+ CV+PS A+ A+ + V P+ A T YD + KE +HH P DE V AG F++LRPGGR++++T P H P F AAH+ V + A EL G V++ + + VTMP RW+ MV +R+ S L F+D E+AEG+ I+
Sbjct: 6 AHYDALAGTFTDHWAYSRA--FVAWMTTALLDRLQPHADAALADVGSGPGLYAAALAERAQLAHPIDCVEPSPAMRAELP---TTVTPVAATAEHIA--TGPEATYDGLWVKEALHHVPHDERPAVLAGLFRRLRPGGRMLLVTWPRRVEH-PLFPAAHEHLARVADRLPPGNLADELDQLGGQVTLTYDSFLVTMPTERWIDMVRARYLSLLARFTDDELAEGIAHIR 226 The following BLAST results are available for this feature:
BLAST of EWM27536.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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