EWM27564.1, cds3089 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|585109831|gb|EWM27564.1| (radical sam domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 852.432 bits (2201), Expect = 0.000e+0 Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTRVSKKPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGRRGAKKGERPWGKNRGGGGAAGRKVARAALGGGQAAA 416 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTRVSKKPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGRRGAKKGERPWGKNRGGGGAAGRKVARAALGGGQAAA Sbjct: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTRVSKKPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGRRGAKKGERPWGKNRGGGGAAGRKVARAALGGGQAAA 416
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|669152282|ref|XP_008611703.1| (cfr family radical SAM enzyme [Saprolegnia diclina VS20] >gi|530736589|gb|EQC34831.1| cfr family radical SAM enzyme [Saprolegnia diclina VS20]) HSP 1 Score: 378.252 bits (970), Expect = 2.160e-125 Identity = 196/390 (50.26%), Postives = 265/390 (67.95%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTR-VSKKPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKG-APAVNDIEDLMDGGGRRGAKKGER 388 MVK R LSP P+ D + FLE G+KQ+HA+++WK I +Q + + QLP + L +F + ++ + EKHVS DGTVKLLV LQDG VEAVI++H GRNTLCVSSQ+GCQMGC+FCATGTMGI +L GEILEQL HA VA IRN+VFMGMGEPL NYDAV+ A++ MT V F L+ +T+STVG++H I+++ D P + LALSLHAP+Q +R +IVP+AKA+P++KL+A +H + + + +EY++L+GVND E A +LG+LL G SV VNLIPYN TDV ++++P +++ F+ +L +Y + TVR +HG +I GACGQLA+ K + A PK P DIEDL G R K G++ Sbjct: 1 MVKKRVLSPAPLLDPKLLPEFLEAHGMKQVHAQKIWKYIASQ----VQAQNANVSIRDIPQLPKELYPLLEANFRIFSTTIAEKHVSRDGTVKLLVTLQDGHNVEAVIMKHSGRNTLCVSSQVGCQMGCTFCATGTMGIIADLAAGEILEQLAHAFCVAPIRNVVFMGMGEPLNNYDAVLGAIKAMTSV--FGLAPKYITLSTVGVIHRIRQLKEDAPLIRLALSLHAPTQEIRVKIVPTAKAYPLDKLMAAIDDHLKDRENRMVMMEYIMLRGVNDALETAHDLGRLLAGRSVHVNLIPYNATDVDAEYQSPTKEEIMAFHGILRQEYNIKVTVRENHGMDIDGACGQLAVK---KLDDALPKTKKPVQRDIEDL--GTTSRSPKSGKK 379
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|813135587|ref|XP_012198540.1| (cfr family radical SAM enzyme [Saprolegnia parasitica CBS 223.65] >gi|641536972|gb|KDO30843.1| cfr family radical SAM enzyme [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 377.481 bits (968), Expect = 4.242e-125 Identity = 198/398 (49.75%), Postives = 265/398 (66.58%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTR-VSKKPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKG--APAVNDIEDLMDGGGRRGAKKGERPWGKNRG 395 MVK R LSP P+ D + FLE G+KQ+HA+++WK I +Q + + QLP + L +F + ++ + EKHVS DGTVKLLV LQDG VEAVI++H GRNTLCVSSQ+GCQMGC+FCATGTMGI +L GEILEQL HA VA IRN+VFMGMGEPL NYDAV+ A++ MT V F L+ +T+STVG++H I+++ D P + LALSLHAP+Q +R +IVP+AKA+P++KL+A +H + + + +EY++L+GVND E A +LG+LL G SV VNLIPYN TDV ++++P +++ F+ +L +Y + TVR +HG +I GACGQLA+ K + A PK P DIEDL G R K G RG Sbjct: 1 MVKKRVLSPAPLLDPKLLPEFLEAHGMKQVHAQKIWKYIASQ----VQAQNANVSIRDIPQLPKELYPLLEANFRIFSTTIAEKHVSRDGTVKLLVTLQDGHNVEAVIMKHSGRNTLCVSSQVGCQMGCTFCATGTMGIIADLAAGEILEQLAHAFCVAPIRNVVFMGMGEPLNNYDAVLGAIKAMTSV--FGLAPKYITLSTVGVIHRIRQLKEDAPLVRLALSLHAPTQEIRVKIVPTAKAYPLDKLMAAIDDHLKDRENRMVMMEYIMLRGVNDALETAHDLGRLLAGRSVHVNLIPYNATDVDAEYQSPTKEEIMAFHGILRTEYNIKVTVRENHGMDIDGACGQLAVK---KLDDALPKTNKKPVQRDIEDL--GATSRAPKSGAGKKASTRG 387
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|566010963|gb|ETI33874.1| (23S rRNA methyltransferase [Phytophthora parasitica P1569] >gi|567948486|gb|ETK74233.1| 23S rRNA methyltransferase [Phytophthora parasitica] >gi|567977154|gb|ETL27663.1| 23S rRNA methyltransferase [Phytophthora parasitica] >gi|570938501|gb|ETP03758.1| 23S rRNA methyltransferase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 370.163 bits (949), Expect = 6.227e-122 Identity = 193/392 (49.23%), Postives = 256/392 (65.31%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTRVSK-KPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGRR--GAKKGERP 389 MVK R LSPLP FD+ ++ FL+ G K+LHA +W+ + ++ T + G+ P + A L EHF T+ V + S DGTVKLL++LQDG +EAVI+RH GRNTLCVSSQ+GCQMGC+FCATGT+GI +L GEILEQL HA+ VA IRN+VFMGMGEPL NYDAV+ A+R MT V F L+ +T+STVG++H I++++ D P + LALSLHAP+Q +R +IVP++ A+P++KL+A +H + + + + VEY +L GVND E A LG+LL SV VNLIPYN TDV F +P +D+ F+ VL Y L T+R +HG +I GACGQLAL G DIEDL G RR +K ++P Sbjct: 15 MVKKRTLSPLPAFDQKALPEFLQTHGFKELHALTIWRYLAQHPDATFADIPGI---------PKTLRALLGEHFAHFTTSVTTEQRSADGTVKLLLKLQDGHEIEAVIMRHTGRNTLCVSSQVGCQMGCTFCATGTLGIIADLCSGEILEQLAHANRVAPIRNVVFMGMGEPLNNYDAVLAAIRAMTKV--FGLAPKYITLSTVGVIHRIRQLSRDAPLVRLALSLHAPTQEMRSEIVPTSTAYPLDKLMAAIDDHLAMKEGRLVMVEYCMLAGVNDSIETAHILGKLLQNRSVHVNLIPYNTTDVGAQFHSPSPEDIRAFHAVLRDPYNLKATIRENHGTDIDGACGQLALKNKPDGS----------RDIEDL---GPRRTKAPRKNKKP 382
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|570314719|gb|ETO62667.1| (23S rRNA methyltransferase [Phytophthora parasitica P1976]) HSP 1 Score: 369.777 bits (948), Expect = 6.527e-122 Identity = 193/392 (49.23%), Postives = 256/392 (65.31%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTRVSK-KPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGRR--GAKKGERP 389 MVK R LSPLP FD+ ++ FL+ G K+LHA +W+ + ++ T + G+ P + A L EHF T+ V + S DGTVKLL++LQDG +EAVI+RH GRNTLCVSSQ+GCQMGC+FCATGT+GI +L GEILEQL HA+ VA IRN+VFMGMGEPL NYDAV+ A+R MT V F L+ +T+STVG++H I++++ D P + LALSLHAP+Q +R +IVP++ A+P++KL+A +H + + + + VEY +L GVND E A LG+LL SV VNLIPYN TDV F +P +D+ F+ VL Y L T+R +HG +I GACGQLAL G DIEDL G RR +K ++P Sbjct: 1 MVKKRTLSPLPAFDQKALPEFLQTHGFKELHALTIWRYLAQHPDATFADIPGI---------PKTLRALLGEHFAHFTTSVTTEQRSADGTVKLLLKLQDGHEIEAVIMRHTGRNTLCVSSQVGCQMGCTFCATGTLGIIADLCSGEILEQLAHANRVAPIRNVVFMGMGEPLNNYDAVLAAIRAMTKV--FGLAPKYITLSTVGVIHRIRQLSRDAPLVRLALSLHAPTQEMRSEIVPTSTAYPLDKLMAAIDDHLAMKEGRLVMVEYCMLAGVNDSIETAHILGKLLQNRSVHVNLIPYNTTDVGAQFHSPSPEDIRAFHAVLRDPYNLKATIRENHGTDIDGACGQLALKNKPDGS----------RDIEDL---GPRRTKAPRKNKKP 368
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|698817346|ref|XP_009841702.1| (23S rRNA methyltransferase [Aphanomyces astaci] >gi|574103205|gb|ETV68748.1| 23S rRNA methyltransferase [Aphanomyces astaci]) HSP 1 Score: 369.392 bits (947), Expect = 7.771e-122 Identity = 196/395 (49.62%), Postives = 257/395 (65.06%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGK--QLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTR-VSKKPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGRRGAKKGERPWGK 392 MVK R LSP P+ D A + F+EE G+K +HA+++WK I T +A A + + LP+ L F T+ V E+H S DGTVKLL+ LQDG +EAVI++H GRNTLCVSSQ+GCQMGC+FCATGTMGI +L GEILEQL HA VA IRN+VFMGMGEPL NYDAV+ A+R MTDV F L+ +T+STVG++H I+++ D P + LALSLHAP+Q LR QIVP+AKA+P++KL+ +H + + + +EY++LK VN A +LG+LL G SV +NLIPYN TDV +F++P D++ F VL DY L T+R +HG +I GACGQLA+ + G P P DIEDL ++P GK Sbjct: 1 MVKKRVLSPAPLLDTALLTAFVEENGLKLVHAQKIWKHI-----STQVQAQSTADISVRDIPHLPSHAYPLLEAKFAAFTTTVAEQHTSSDGTVKLLITLQDGHNIEAVIMKHSGRNTLCVSSQVGCQMGCTFCATGTMGIIADLCAGEILEQLAHAFRVAPIRNVVFMGMGEPLNNYDAVLAAIRAMTDV--FGLAPKYITLSTVGVIHRIRQLKEDAPLVRLALSLHAPTQDLRVQIVPTAKAYPLDKLMLAIDDHLKDRDNRMVMMEYIMLKHVNVAIATAHDLGKLLAGKSVHINLIPYNATDVDAEFQSPTRDEIVAFKDVLRTDYNLKVTIRENHGMDIDGACGQLAVKKLEAGLPKSP-FVPEQRDIEDLGQRKKTSSKTTKKQPPGK 387
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|675177037|ref|XP_008897403.1| (23S rRNA methyltransferase [Phytophthora parasitica INRA-310] >gi|568103227|gb|ETN17898.1| 23S rRNA methyltransferase [Phytophthora parasitica INRA-310]) HSP 1 Score: 369.007 bits (946), Expect = 1.710e-121 Identity = 192/391 (49.10%), Postives = 256/391 (65.47%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTRVSK-KPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGR-RGAKKGERP 389 MVK R LSPLP FD+ ++ FL+ G K+LHA +W+ + ++ T + G+ P + A L EHF T+ V + S DGTVKLL++LQDG +EAVI+RH GRNTLCVSSQ+GCQMGC+FCATGT+GI +L GEILEQL HA+ VA IRN+VFMGMGEPL NYDAV+ A+R MT V F L+ +T+STVG++H I++++ D P + LALSLHAP+Q +R +IVP++ A+P++KL+A +H + + + + VEY +L GVND E A LG+LL SV VNLIPYN TDV F +P +D+ F+ VL Y L T+R +HG +I GACGQLAL G DIEDL G R + +K ++P Sbjct: 15 MVKKRTLSPLPAFDQKALPEFLQTHGFKELHALTIWRYLAQHPDATFADIPGI---------PKTLRALLGEHFAHFTTSVTTEQRSADGTVKLLLKLQDGHEIEAVIMRHTGRNTLCVSSQVGCQMGCTFCATGTLGIIADLCSGEILEQLAHANRVAPIRNVVFMGMGEPLNNYDAVLAAIRAMTKV--FGLAPKYITLSTVGVIHRIRQLSRDAPLVRLALSLHAPTQEMRSEIVPTSTAYPLDKLMAAIDDHLAMKEGRLVMVEYCMLAGVNDSIETAHILGKLLQNRSVHVNLIPYNTTDVGAQFHSPSPEDIRAFHAVLRDPYNLKATIRENHGTDIDGACGQLALKNKPDGS----------RDIEDL--GPQRTKAPRKNKKP 382
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|570968792|gb|ETP31911.1| (23S rRNA methyltransferase [Phytophthora parasitica P10297]) HSP 1 Score: 369.007 bits (946), Expect = 1.729e-121 Identity = 192/391 (49.10%), Postives = 256/391 (65.47%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTRVSK-KPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGR-RGAKKGERP 389 MVK R LSPLP FD+ ++ FL+ G K+LHA +W+ + ++ T + G+ P + A L EHF T+ V + S DGTVKLL++LQDG +EAVI+RH GRNTLCVSSQ+GCQMGC+FCATGT+GI +L GEILEQL HA+ VA IRN+VFMGMGEPL NYDAV+ A+R MT V F L+ +T+STVG++H I++++ D P + LALSLHAP+Q +R +IVP++ A+P++KL+A +H + + + + VEY +L GVND E A LG+LL SV VNLIPYN TDV F +P +D+ F+ VL Y L T+R +HG +I GACGQLAL G DIEDL G R + +K ++P Sbjct: 15 MVKKRTLSPLPAFDQKALPEFLQTHGFKELHALTIWRYLAQHPDATFADIPGI---------PKTLRALLGEHFAHFTTSVTTEQRSADGTVKLLLKLQDGHEIEAVIMRHTGRNTLCVSSQVGCQMGCTFCATGTLGIIADLCSGEILEQLAHANRVAPIRNVVFMGMGEPLNNYDAVLAAIRAMTKV--FGLAPKYITLSTVGVIHRIRQLSRDAPLVRLALSLHAPTQEMRSEIVPTSTAYPLDKLMAAIDDHLAMKEGRLVMVEYCMLAGVNDSIETAHILGKLLQNRSVHVNLIPYNTTDVGAQFHSPSPEDIRAFHAVLRDPYNLKATIRENHGTDIDGACGQLALKNKPDGS----------RDIEDL--GPQRTKAPRKNKKP 382
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|568006656|gb|ETL80907.1| (23S rRNA methyltransferase [Phytophthora parasitica] >gi|568036491|gb|ETM34099.1| 23S rRNA methyltransferase [Phytophthora parasitica]) HSP 1 Score: 368.237 bits (944), Expect = 3.658e-121 Identity = 192/391 (49.10%), Postives = 256/391 (65.47%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTRVSK-KPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGAPAVNDIEDLMDGGGR-RGAKKGERP 389 MVK R LSPLP FD+ ++ FL+ G K+LHA +W+ + ++ T + G+ P + A L EHF T+ V + S DGTVKLL++LQDG +EAVI+RH GRNTLCVSSQ+GCQMGC+FCATGT+GI +L GEILEQL HA+ VA IRN+VFMGMGEPL NYDAV+ A+R MT V F L+ +T+STVG++H I++++ D P + LALSLHAP+Q +R +IVP++ A+P++KL+A +H + + + + VEY +L GVND E A LG+LL SV VNLIPYN TDV F +P +D+ F+ VL Y L T+R +HG +I GACGQLAL G DIEDL G R + +K ++P Sbjct: 15 MVKKRTLSPLPAFDQKALPEFLQTHGFKELHALTIWRYLAQHPDATFADIPGI---------PKTLRALLGEHFAHFTTSVTTEQRSADGTVKLLLKLQDGHEIEAVIMRHTGRNTLCVSSQVGCQMGCTFCATGTLGIIADLCSGEILEQLAHANRVAPIRNVVFMGMGEPLNNYDAVLAAIRAMTKV--FGLAPKYITLSTVGVIHRIRQLSRDAPLVRLALSLHAPTQEMRSEIVPTSTAYPLDKLMAAIDDHLAMKEGRLVMVEYCMLAGVNDSIETAHILGKLLQNRSVHVNLIPYNTTDVGAQFHSPSPEDIRAFHAVLRDPYNLKATIRENHGTDIDGACGQLALKNKPDGS----------RDIEDL--GPLRTKAPRKNKKP 382
BLAST of EWM27564.1 vs. NCBI_GenBank
Match: gi|673051037|ref|XP_008879479.1| (23S rRNA methyltransferase [Aphanomyces invadans] >gi|574464798|gb|ETV91842.1| 23S rRNA methyltransferase [Aphanomyces invadans]) HSP 1 Score: 365.925 bits (938), Expect = 1.256e-120 Identity = 193/394 (48.98%), Postives = 261/394 (66.24%), Query Frame = 0 Query: 1 MVKARKLSPLPVFDEASVRTFLEERGIKQLHARQLWKVIIKNRPKTLQEADGLAKLEMGKQLPTGMVAELAEHFVLTTSRVVEKHVSGDGTVKLLVELQDGQRVEAVIIRHEGRNTLCVSSQIGCQMGCSFCATGTMGIKGNLLGGEILEQLYHASGVASIRNIVFMGMGEPLQNYDAVMDAVRGMTDVKRFRLSHHQVTISTVGIVHAIKRMTADFPQLNLALSLHAPSQALRQQIVPSAKAFPIEKLLAVCLEHTR-VSKKPLFVEYVLLKGVNDRPEHARELGQLLVGASVIVNLIPYNPTDVAMDFETPEDDDVDTFYTVLAHDYKLLTTVRVHHGREIGGACGQLALTQPGKGESAGPKGA-PAVNDIEDLMDGGGRRGAKKGERPWGK 392 MVK R LSP P+ D A + F+E G+K +HA+++WK I + ++ + LP+ L + F T+ V E+H S DGTVKLL+ LQDG +E+VI++H GRNTLCVSSQ+GCQMGC+FCATGTMGI +L GEILEQL HA VA IRN+VFMGMGEPL NYDAV+ A+R MTD+ F L+ +T+STVG++H I+++ D P + LALSLHAP+Q LR QIVP+AKA+P++KL+ +H + + + +EY++LK VN P+ A +LG+LL G SV +NLIPYN TDV +F++P D++ F +L +Y L TVR +HG +I GACGQLA+ K E+ PK + DIEDL G+R K +P K Sbjct: 1 MVKKRVLSPAPLLDPALLTAFVEANGLKLVHAQKIWKHI---SAQVQTQSTANISVRDVLHLPSHAYPLLEDSFATFTTTVTEQHTSSDGTVKLLITLQDGHNIESVIMKHSGRNTLCVSSQVGCQMGCTFCATGTMGIIADLCAGEILEQLAHAFRVAPIRNVVFMGMGEPLNNYDAVLTAIRAMTDI--FGLAPKYITLSTVGVIHRIRQLKEDAPLVRLALSLHAPTQDLRVQIVPTAKAYPLDKLMLAIDDHLKDRENRMVMMEYIMLKDVNVAPDTAHDLGRLLQGKSVHINLIPYNATDVDAEFQSPSQDEIVAFKDILRAEYHLKVTVRENHGMDIDGACGQLAV---KKLEAGLPKSSGLDQRDIEDL----GKR-TNKAPKPSKK 381 The following BLAST results are available for this feature:
BLAST of EWM27564.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|