EWM27558.1, cds3077 (CDS) Nannochloropsis gaditana

Overview
NameEWM27558.1
Unique Namecds3077
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:679448..679699 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27558.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100015g78.6374.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:679448..679699 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27558.1 vs. NCBI_GenBank
Match: gi|585109825|gb|EWM27558.1| (hypothetical protein Naga_100015g78 [Nannochloropsis gaditana])

HSP 1 Score: 165.622 bits (418), Expect = 6.552e-52
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MTCERKERAKRRKGKGRRRRRKEKQKERLEIKMLCIQSIADFMSSLQRKRHVDLKRHTNILLVTALACDQVGSTFEPVKRGVR 83
            MTCERKERAKRRKGKGRRRRRKEKQKERLEIKMLCIQSIADFMSSLQRKRHVDLKRHTNILLVTALACDQVGSTFEPVKRGVR
Sbjct:    1 MTCERKERAKRRKGKGRRRRRKEKQKERLEIKMLCIQSIADFMSSLQRKRHVDLKRHTNILLVTALACDQVGSTFEPVKRGVR 83
The following BLAST results are available for this feature:
BLAST of EWM27558.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109825|gb|EWM27558.1|6.552e-52100.00hypothetical protein Naga_100015g78 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3085rna3085Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications