EWM27530.1, cds3074 (CDS) Nannochloropsis gaditana

Overview
NameEWM27530.1
Unique Namecds3074
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:670402..671982 +

Link to JBrowse

Properties
Property NameValue
Start range670402
Start range.
Protein idEWM27530.1
Productatp-dependent rna helicase ddx24
Partialtrue
Orig transcript idgnl|cribi|Naga_100015g81.6346.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:670402..671982 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001650Helicase_C
Homology
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|585109797|gb|EWM27530.1| (atp-dependent rna helicase ddx24, partial [Nannochloropsis gaditana])

HSP 1 Score: 1057.36 bits (2733), Expect = 0.000e+0
Identity = 526/526 (100.00%), Postives = 526/526 (100.00%), Query Frame = 0
Query:    1 EKEEEEEDLLEPAEVPTRSLEDVVKEARRLGLTGLHGLEEEDKERAGGESSTEGDPEGGRGEEDDGLDGVESGVGGQRRRAQKKRAGEGEEPEVDEPGEGGAGGGASDRAVRLRPLPPPVTRQTLIFSATLIMPEETRGKMGGKKARGPKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNEKEHGTEKERQRSRQMEMDRKRLNELLSQPMVQQRRKFINVADSLQALAQTEECKDAIKAVSQSARPKIRKRTGL 526
            EKEEEEEDLLEPAEVPTRSLEDVVKEARRLGLTGLHGLEEEDKERAGGESSTEGDPEGGRGEEDDGLDGVESGVGGQRRRAQKKRAGEGEEPEVDEPGEGGAGGGASDRAVRLRPLPPPVTRQTLIFSATLIMPEETRGKMGGKKARGPKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNEKEHGTEKERQRSRQMEMDRKRLNELLSQPMVQQRRKFINVADSLQALAQTEECKDAIKAVSQSARPKIRKRTGL
Sbjct:    1 EKEEEEEDLLEPAEVPTRSLEDVVKEARRLGLTGLHGLEEEDKERAGGESSTEGDPEGGRGEEDDGLDGVESGVGGQRRRAQKKRAGEGEEPEVDEPGEGGAGGGASDRAVRLRPLPPPVTRQTLIFSATLIMPEETRGKMGGKKARGPKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNEKEHGTEKERQRSRQMEMDRKRLNELLSQPMVQQRRKFINVADSLQALAQTEECKDAIKAVSQSARPKIRKRTGL 526          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|695397190|ref|XP_009521679.1| (hypothetical protein PHYSODRAFT_480097 [Phytophthora sojae] >gi|348686576|gb|EGZ26391.1| hypothetical protein PHYSODRAFT_480097 [Phytophthora sojae])

HSP 1 Score: 278.485 bits (711), Expect = 4.072e-81
Identity = 168/381 (44.09%), Postives = 230/381 (60.37%), Query Frame = 0
Query:  117 PPPVTRQTLIFSATLIMPEETRGKMGGKKARG-PKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE-----KEHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            PP  TRQT +FSATL++PE      GG+  +G  KK +    V+ER+M+ VG+RGKPAV+DL+    +    G  A    E Q                  +    ++LPAGL+LC  +   + +D++LYYFL ++PGRTI+F N+I Q RRL  LLSLL LP  ALHA+MQQR RLK LD FRA  + +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARA+++GLS S+V+P D KFH ++C+ L      QRP            G+  FP D + +    ERV LA  I   E   G+ ++  +WF + A  ADLD+DE+LL E     +   ++K+   ++ ++  R +LN LLSQP+  V   RKF
Sbjct:  407 PPRHTRQTFLFSATLMIPE------GGRFHKGKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIAEPDMGIPGAKAIISEEDQRKMKK------------QQDNVALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRRLTSLLSLLNLPVFALHAEMQQRQRLKKLDGFRAHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARADKDGLSISLVSPVDAKFHVQICKML------QRP-----------TGLSDFPFDHRYMETIDERVRLAKSINDQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDSKKKTTANQSVQTLRAQLNRLLSQPLRPVGSTRKF 752          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|813113165|ref|XP_012195315.1| (hypothetical protein SPRG_19122 [Saprolegnia parasitica CBS 223.65] >gi|641540526|gb|KDO34308.1| hypothetical protein SPRG_19122 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 275.789 bits (704), Expect = 3.706e-80
Identity = 160/376 (42.55%), Postives = 220/376 (58.51%), Query Frame = 0
Query:  118 PPVTRQTLIFSATLIMPEETRGKMGGKKARGPKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNEK--EHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            P   RQT +FSAT+ +  +  G+   K+ + P        V+E IMR VG+RGKPAV+DL+     S  +   A               AS  P GT     + V LPAGL+L  ++++  H++  LYYFL ++PGRTIVF N+I   RR+A +LSLL+LP  ALHA+MQQ+ RLK L+ FRA  + +L+ATDVAARGLDIP VE+V+HY +PRS E FVHR+GRTARA +EGLS SMVAP D K+H ++C  L       RP           +G   FP+D + L   +ERV LA +I   E +  + ++  SWF + A  ADL LD+ELL +   E G++    ++         LN LL +P+  +  +RKF
Sbjct:  411 PTFVRQTFLFSATMTL--KNAGRYQTKRMKNPTALT----VLESIMRRVGLRGKPAVVDLSVAAATSATTDESAP--------------ASKKPKGT-----SEVTLPAGLELSQIETLDEHRNDCLYYFLTQYPGRTIVFLNAIAGVRRVAGILSLLKLPVFALHAEMQQKQRLKKLEGFRANPKGILIATDVAARGLDIPSVEYVVHYHIPRSAETFVHRSGRTARAAKEGLSVSMVAPIDAKYHAQICNVL------HRP-----------SGFSSFPIDHKFLPVIKERVKLAEQIYAEENQESKSKSEASWFSQMAEAADLPLDDELLAQMHVEGGSDVRGAKA--------NLNRLLQEPLRPIGAKRKF 736          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|953501132|emb|CEG37502.1| (dead deah box rna [Plasmopara halstedii])

HSP 1 Score: 271.166 bits (692), Expect = 4.762e-78
Identity = 179/457 (39.17%), Postives = 255/457 (55.80%), Query Frame = 0
Query:   41 EDKERAGGESSTEGDPEGGRGEEDDGLDGVESGVGGQRRRAQKKRAGEGEEPEVDEPGEGGAGGGASDRAVRLRPLPPPVTRQTLIFSATLIMPEETRGKMGGKKARGPKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNT-VALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE-----KEHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            E KE   G+S  +GD   G  +  +   G +  +     + Q K+ G+GE       G+       S  A RL        RQT +FSATL +PE   G+    KA   KK      V+ER+M+ VG+RGKPA++DL+              + SE  +    +  +  A      + GN  ++LPAGL+LC  +   + +D++LYYFL ++PGRTI+F N+I Q R+L+ LL+LL LP  ALHA+MQQR RLK LD FR+  + +LVATDVAARGLDIP VE+V+HY + RS EVFVHR+GRTARAN +GLS S+V+P D K H ++C+ L      QRP            G+  FP D + + A   R+ LA  I   E   G+ ++  +WF + A  ADLD+DE+LL E     +    +K++  ++ ++  R +LN LL+ P+  V   RKF
Sbjct:  370 ETKENENGDSEEDGD--SGDIDMSNFAKGTKVVMLNDVLKMQSKQPGDGENSAEKNGGKCAKIKNKSVVAQRL-------VRQTFLFSATLTIPEG--GRFQKNKA---KKCHNTLTVLERVMKRVGLRGKPAIVDLSI-------------AESELNIPDATSIDSRDAQRTLKKQQGNVPLSLPAGLELCQHEVSESTRDSFLYYFLSQYPGRTIIFLNAIHQVRKLSGLLTLLNLPVFALHAEMQQRQRLKKLDGFRSHTKGILVATDVAARGLDIPSVEYVVHYHIARSTEVFVHRSGRTARANMDGLSISLVSPTDAKSHSQICKML------QRP-----------TGLSEFPFDHRYMEAIDVRMRLAKSINEQEDAAGKLKSEATWFEQMAAAADLDMDEDLLFELKAKQRNQDDKKKKSANQSVQSLRAQLNRLLAVPLRPVGYARKF 782          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|970656361|gb|KUF94382.1| (hypothetical protein AM588_10009856 [Phytophthora nicotianae])

HSP 1 Score: 266.929 bits (681), Expect = 1.326e-76
Identity = 158/382 (41.36%), Postives = 228/382 (59.69%), Query Frame = 0
Query:  116 LPPPVTRQTLIFSATLIMPEETRGKMGGKKARG-PKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE-----KEHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            + P   RQT +FSATL +PE      GG+  +   KK +    V+ER+M+ VG+RGKPAV+DL+       + G P +          P  +  +       +    ++LPAGL+LC  +   + +D++LYYFL ++PGRTI+F N+I Q R+L  LL+LL LP  ALHA+MQQR RLK LD FR+  + +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS S+V+P D K+H ++C+ L      QRP            G+  FP D + + A  ER+ LA  I   E   G+ ++  +WF + A  ADLD+DE+LL E     +    +K +  ++ ++  R +L+ LL+ P+  V   RKF
Sbjct:  434 VTPRHVRQTFLFSATLTIPE------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIA---EPDMGIPGAK---------PIISEEIERKMKKQQENVALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML------QRP-----------TGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKF 780          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|568038956|gb|ETM36470.1| (hypothetical protein L914_16847 [Phytophthora parasitica])

HSP 1 Score: 266.544 bits (680), Expect = 1.884e-76
Identity = 158/382 (41.36%), Postives = 228/382 (59.69%), Query Frame = 0
Query:  116 LPPPVTRQTLIFSATLIMPEETRGKMGGKKARG-PKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE-----KEHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            + P   RQT +FSATL +PE      GG+  +   KK +    V+ER+M+ VG+RGKPAV+DL+       + G P +          P  +  +       +    ++LPAGL+LC  +   + +D++LYYFL ++PGRTI+F N+I Q R+L  LL+LL LP  ALHA+MQQR RLK LD FR+  + +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS S+V+P D K+H ++C+ L      QRP            G+  FP D + + A  ER+ LA  I   E   G+ ++  +WF + A  ADLD+DE+LL E     +    +K +  ++ ++  R +L+ LL+ P+  V   RKF
Sbjct:  434 VTPRHVRQTFLFSATLTIPE------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIA---EPDMGIPGAK---------PIISEEVERKMKKQQENVALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML------QRP-----------TGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKF 780          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|570317164|gb|ETO65112.1| (hypothetical protein F444_17548 [Phytophthora parasitica P1976])

HSP 1 Score: 266.544 bits (680), Expect = 1.984e-76
Identity = 158/382 (41.36%), Postives = 228/382 (59.69%), Query Frame = 0
Query:  116 LPPPVTRQTLIFSATLIMPEETRGKMGGKKARG-PKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE-----KEHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            + P   RQT +FSATL +PE      GG+  +   KK +    V+ER+M+ VG+RGKPAV+DL+       + G P +          P  +  +       +    ++LPAGL+LC  +   + +D++LYYFL ++PGRTI+F N+I Q R+L  LL+LL LP  ALHA+MQQR RLK LD FR+  + +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS S+V+P D K+H ++C+ L      QRP            G+  FP D + + A  ER+ LA  I   E   G+ ++  +WF + A  ADLD+DE+LL E     +    +K +  ++ ++  R +L+ LL+ P+  V   RKF
Sbjct:  434 VTPRHVRQTFLFSATLTIPE------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIA---EPDMGIPGAK---------PIISEEVERKMKKQQENVALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML------QRP-----------TGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKF 780          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|566013449|gb|ETI36360.1| (hypothetical protein F443_17508 [Phytophthora parasitica P1569] >gi|568009042|gb|ETL83255.1| hypothetical protein L917_16765 [Phytophthora parasitica] >gi|570971180|gb|ETP34299.1| hypothetical protein F442_17359 [Phytophthora parasitica P10297] >gi|970641600|gb|KUF83616.1| ATP-dependent RNA helicase ddx24 [Phytophthora nicotianae])

HSP 1 Score: 266.544 bits (680), Expect = 1.984e-76
Identity = 158/382 (41.36%), Postives = 228/382 (59.69%), Query Frame = 0
Query:  116 LPPPVTRQTLIFSATLIMPEETRGKMGGKKARG-PKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE-----KEHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            + P   RQT +FSATL +PE      GG+  +   KK +    V+ER+M+ VG+RGKPAV+DL+       + G P +          P  +  +       +    ++LPAGL+LC  +   + +D++LYYFL ++PGRTI+F N+I Q R+L  LL+LL LP  ALHA+MQQR RLK LD FR+  + +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS S+V+P D K+H ++C+ L      QRP            G+  FP D + + A  ER+ LA  I   E   G+ ++  +WF + A  ADLD+DE+LL E     +    +K +  ++ ++  R +L+ LL+ P+  V   RKF
Sbjct:  434 VTPRHVRQTFLFSATLTIPE------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIA---EPDMGIPGAK---------PIISEEVERKMKKQQENVALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML------QRP-----------TGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEATWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKF 780          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|567950876|gb|ETK76583.1| (hypothetical protein L915_17042 [Phytophthora parasitica] >gi|567979543|gb|ETL30021.1| hypothetical protein L916_16937 [Phytophthora parasitica])

HSP 1 Score: 266.544 bits (680), Expect = 2.245e-76
Identity = 158/382 (41.36%), Postives = 228/382 (59.69%), Query Frame = 0
Query:  116 LPPPVTRQTLIFSATLIMPEETRGKMGGKKARG-PKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE-----KEHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            + P   RQT +FSATL +PE      GG+  +   KK +    V+ER+M+ VG+RGKPAV+DL+       + G P +          P  +  +       +    ++LPAGL+LC  +   + +D++LYYFL ++PGRTI+F N+I Q R+L  LL+LL LP  ALHA+MQQR RLK LD FR+  + +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS S+V+P D K+H ++C+ L      QRP            G+  FP D + + A  ER+ LA  I   E   G+ ++  +WF + A  ADLD+DE+LL E     +    +K +  ++ ++  R +L+ LL+ P+  V   RKF
Sbjct:  434 VTPRHVRQTFLFSATLTIPE------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIA---EPDMGIPGAK---------PIISEEVERKMKKQQENVALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML------QRP-----------TGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEVTWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKF 780          
BLAST of EWM27530.1 vs. NCBI_GenBank
Match: gi|570940897|gb|ETP06154.1| (hypothetical protein F441_17376 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 266.544 bits (680), Expect = 2.389e-76
Identity = 158/382 (41.36%), Postives = 228/382 (59.69%), Query Frame = 0
Query:  116 LPPPVTRQTLIFSATLIMPEETRGKMGGKKARG-PKKGKGPGDVIERIMRDVGMRGKPAVLDLTSGTGESRESGNPASSHSEGQLATTPTFAASLAPSGTPSRPGNTVALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE-----KEHGTEKERQRSRQMEMDRKRLNELLSQPM--VQQRRKF 489
            + P   RQT +FSATL +PE      GG+  +   KK +    V+ER+M+ VG+RGKPAV+DL+       + G P +          P  +  +       +    ++LPAGL+LC  +   + +D++LYYFL ++PGRTI+F N+I Q R+L  LL+LL LP  ALHA+MQQR RLK LD FR+  + +LVATDVAARGLDIP V++V+HY + RS EVFVHR+GRTARAN++GLS S+V+P D K+H ++C+ L      QRP            G+  FP D + + A  ER+ LA  I   E   G+ ++  +WF + A  ADLD+DE+LL E     +    +K +  ++ ++  R +L+ LL+ P+  V   RKF
Sbjct:  434 VTPRHVRQTFLFSATLTIPE------GGRFQKSKTKKYRNALSVLERVMKRVGLRGKPAVVDLSIA---EPDMGIPGAK---------PIISEEVERKMKKQQENVALSLPAGLELCQHEVTESTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTGLLNLLNLPVFALHAEMQQRQRLKKLDGFRSHAKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKML------QRP-----------TGLSDFPFDHRYMEAIDERMRLAKSINEQENAAGKLKSEVTWFEQMAAAADLDMDEDLLFELGAKQRNQDGKKRKTANQSVQSLRAQLSRLLAAPLRPVGSARKF 780          
The following BLAST results are available for this feature:
BLAST of EWM27530.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109797|gb|EWM27530.1|0.000e+0100.00atp-dependent rna helicase ddx24, partial [Nannoch... [more]
gi|695397190|ref|XP_009521679.1|4.072e-8144.09hypothetical protein PHYSODRAFT_480097 [Phytophtho... [more]
gi|813113165|ref|XP_012195315.1|3.706e-8042.55hypothetical protein SPRG_19122 [Saprolegnia paras... [more]
gi|953501132|emb|CEG37502.1|4.762e-7839.17dead deah box rna [Plasmopara halstedii][more]
gi|970656361|gb|KUF94382.1|1.326e-7641.36hypothetical protein AM588_10009856 [Phytophthora ... [more]
gi|568038956|gb|ETM36470.1|1.884e-7641.36hypothetical protein L914_16847 [Phytophthora para... [more]
gi|570317164|gb|ETO65112.1|1.984e-7641.36hypothetical protein F444_17548 [Phytophthora para... [more]
gi|566013449|gb|ETI36360.1|1.984e-7641.36hypothetical protein F443_17508 [Phytophthora para... [more]
gi|567950876|gb|ETK76583.1|2.245e-7641.36hypothetical protein L915_17042 [Phytophthora para... [more]
gi|570940897|gb|ETP06154.1|2.389e-7641.36hypothetical protein F441_17376 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3082rna3082Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications