EWM27615.1, cds3069 (CDS) Nannochloropsis gaditana

Overview
NameEWM27615.1
Unique Namecds3069
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:658789..658950 -
Alignment locationCM002460.1:657653..658618 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27615.1
Productdna repair protein rad51
Orig transcript idgnl|cribi|Naga_100069g17.5334.mrna
GeneRad51A
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:658789..658950 -
CM002460.1supercontigCM002460.1:657653..658618 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0005524ATP binding
GO:0000150recombinase activity
GO:0008094DNA-dependent ATPase activity
GO:0003690double-stranded DNA binding
GO:0003697single-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0000003reproduction
GO:0007049cell cycle
GO:0009058biosynthetic process
GO:0016043cellular component organization
GO:0006281DNA repair
GO:0006259DNA metabolic process
GO:0007131reciprocal meiotic recombination
GO:1990426mitotic recombination-dependent replication fork processing
GO:0000724double-strand break repair via homologous recombination
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR010995DNA_repair_Rad51/TF_NusA_a-hlx
IPR020588RecA_ATP-bd
IPR020587RecA_monomer-monomer_interface
IPR013632DNA_recomb/repair_Rad51_C
IPR011940DMC1_rcmbase
IPR016467DNA_recomb/repair_RecA-like
IPR011941DNA_recomb/repair_Rad51
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|585109883|gb|EWM27615.1| (dna repair protein rad51 [Nannochloropsis gaditana])

HSP 1 Score: 776.548 bits (2004), Expect = 0.000e+0
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query:    1 MLPSFLFSIRSHSNDNRNSTSGGKLEAYSIMAAAVAEMQQHATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
            MLPSFLFSIRSHSNDNRNSTSGGKLEAYSIMAAAVAEMQQHATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD
Sbjct:    1 MLPSFLFSIRSHSNDNRNSTSGGKLEAYSIMAAAVAEMQQHATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|298713772|emb|CBJ27144.1| (DNA repair and recombination protein Rad51A [Ectocarpus siliculosus])

HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0
Identity = 266/343 (77.55%), Postives = 301/343 (87.76%), Query Frame = 0
Query:   33 AAVAEMQQHATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
            +A  EMQQ   ++Q SG    EVV +F HITELE HG+NR D+ +L EAGYCTVESI+H T+RKL ++KGIS+QKA K+KE  YKLVP+GF TA+Q L  R+DLI L+TGSK+LD LL GG+ETGSLTE+FGEFRTGKTQLCHTLCV  Q+P+D GGGEGKAMYIDTEGTFRPQRL AIAERFGL+ D VL+NVA+ARAHNSEQQMDLLKMASAMM+EDRYAL+V+DSATAL+RTDYCGRGELSERQMQLAQFLRQLTRM+EEFGVAVVLTNQVVANPDGMSFAKD TKPIGGNIIAHAS TRLRLRK RG+NRICQ++DSPTL E+E QFSIG  G+ED KD
Sbjct:    2 SAQEEMQQSGEVQQ-SGEAAEEVVASFHHITELEAHGINRNDVQRLSEAGYCTVESISHCTIRKLVEVKGISEQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQMPLDAGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 343          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|219119366|ref|XP_002180445.1| (Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407918|gb|EEC47853.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 483.797 bits (1244), Expect = 1.184e-168
Identity = 238/350 (68.00%), Postives = 283/350 (80.86%), Query Frame = 0
Query:   31 MAAAVAEMQQHATIEQ-----TSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
            MAAAV + Q    + Q          E EV V+++ +  L+ HG+   D+ KL  AGY TVESI HAT+RKL+D+KGIS+ K  K+KEI   +VPM F TAA  LE RK L+ L+TGS +LD LL GGVETGS+TE+FGEFRTGKTQLCHTLCVT Q+ + +GG EGKA+YIDTEGTFRP RL AIAERFGLD    L+NVA+ARAHNSE Q +LLK+A+A+MS+DRYAL+VVDSATALFRTDY GRGELSERQMQ+AQFLRQLTR++EEFGVAV +TNQVVANPDGMSFAKD TKPIGGNI+AHAS TRLRLRKGRG+NRIC ++DSPTLPEA+ QF++GA G+ DA+D
Sbjct:    1 MAAAVEQQQYENPVAQEFQQEGGAEEEVEVAVSYQTLDVLQEHGIAANDIQKLNAAGYHTVESIAHATIRKLSDVKGISEAKVLKLKEITKSMVPMDFKTAADALEDRKALVTLTTGSIELDKLLEGGVETGSITEVFGEFRTGKTQLCHTLCVTCQMAVTEGGAEGKAIYIDTEGTFRPNRLQAIAERFGLDPTVALENVAYARAHNSEHQAELLKLAAAIMSQDRYALLVVDSATALFRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVANPDGMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADAQFAVGAQGVCDAQD 350          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|1210524849|dbj|GAX16358.1| (DNA repair protein RAD51 [Fistulifera solaris])

HSP 1 Score: 483.411 bits (1243), Expect = 1.185e-168
Identity = 231/342 (67.54%), Postives = 278/342 (81.29%), Query Frame = 0
Query:   34 AVAEMQQHATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
            AVA+  + A  E   G    E+ V ++ +  L+ HG+   D+ KL  AGY TVESI HAT+RKLT++KGIS+ K  K+KE+   +VPM F TAA  LE RK L+ L+TGS +LD LL GG+ETGS+TE+FGEFRTGKTQLCHTLC+T Q+ +  GG EGKA+YIDTEGTFRP RL AIAERFGLD    L+NVA+ARAHNSE QM+LLKMA+A+MS+DRYAL+VVDSATAL+RTDY GRGELSERQMQ+AQFLRQLTR++EEFGVAV +TNQVVA+PD MSFAKD TKPIGGNI+AHAS TRLRLRKGRG+NRIC ++DSPTLPEA+ QF++GA G+ DA D
Sbjct:    3 AVAQNYETAMTETEQG-DMMEIAVAYQTLDALQEHGIAAGDIAKLQAAGYHTVESIAHATVRKLTEVKGISEAKVMKLKELTKSMVPMDFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSITEVFGEFRTGKTQLCHTLCITCQMAITDGGAEGKAIYIDTEGTFRPARLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMSQDRYALLVVDSATALYRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVASPDAMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADCQFAVGAQGVCDATD 343          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|1210512687|dbj|GAX28277.1| (DNA repair protein RAD51 [Fistulifera solaris])

HSP 1 Score: 482.256 bits (1240), Expect = 2.875e-168
Identity = 230/342 (67.25%), Postives = 278/342 (81.29%), Query Frame = 0
Query:   34 AVAEMQQHATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
            AVA+  + A  E   G    E+ V ++ +  L+ HG+   D+ KL  AGY TVESI HAT+RKLT++KGIS+ K  K+KE+   +VPM F TAA  LE RK L+ L+TGS +LD LL GG+ETGS+TE+FGEFRTGKTQLCHTLC+T Q+ +  GG EGKA+YIDTEGTFRP RL AIAERFGLD    L+NVA+ARAHNSE QM+LLKMA+A+M++DRYAL+VVDSATAL+RTDY GRGELSERQMQ+AQFLRQLTR++EEFGVAV +TNQVVA+PD MSFAKD TKPIGGNI+AHAS TRLRLRKGRG+NRIC ++DSPTLPEA+ QF++GA G+ DA D
Sbjct:    3 AVAQNYETAMTETEQG-DMMEIAVAYQTLEALQEHGIAAGDIAKLQAAGYHTVESIAHATVRKLTEVKGISEAKVMKLKELTKSMVPMDFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSITEVFGEFRTGKTQLCHTLCITCQMAITDGGAEGKAIYIDTEGTFRPARLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMAQDRYALLVVDSATALYRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVASPDAMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADCQFAVGAQGVCDATD 343          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|675198449|ref|XP_008908109.1| (DNA repair protein RAD51 [Phytophthora parasitica INRA-310] >gi|675198451|ref|XP_008908110.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica INRA-310] >gi|566020178|gb|ETI43089.1| DNA repair protein RAD51 [Phytophthora parasitica P1569] >gi|566020179|gb|ETI43090.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica P1569] >gi|567986198|gb|ETL36524.1| DNA repair protein RAD51 [Phytophthora parasitica] >gi|567986199|gb|ETL36525.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica] >gi|568015564|gb|ETL89741.1| DNA repair protein RAD51 [Phytophthora parasitica] >gi|568015565|gb|ETL89742.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica] >gi|568045881|gb|ETM43009.1| DNA repair protein RAD51 [Phytophthora parasitica] >gi|568045882|gb|ETM43010.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica] >gi|568091799|gb|ETN06617.1| DNA repair protein RAD51 [Phytophthora parasitica INRA-310] >gi|568091800|gb|ETN06618.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica INRA-310] >gi|570323783|gb|ETO71731.1| DNA repair protein RAD51 [Phytophthora parasitica P1976] >gi|570323784|gb|ETO71732.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica P1976] >gi|570947595|gb|ETP12852.1| DNA repair protein RAD51 [Phytophthora parasitica CJ01A1] >gi|570947596|gb|ETP12853.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica CJ01A1] >gi|570980205|gb|ETP40943.1| DNA repair protein RAD51 [Phytophthora parasitica P10297] >gi|570980206|gb|ETP40944.1| DNA repair protein RAD51, variant 1 [Phytophthora parasitica P10297] >gi|970665326|gb|KUG02013.1| DNA repair protein RAD51 [Phytophthora nicotianae])

HSP 1 Score: 441.81 bits (1135), Expect = 2.393e-152
Identity = 218/333 (65.47%), Postives = 265/333 (79.58%), Query Frame = 0
Query:   40 QHATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIED 372
            Q+   E   G  EHE+    R +  LE  G+N TD+ KL EAG  TV+++  AT ++L  IKGIS+ KA+K+ + A ++V +GF TAA  LE+RKDLI LSTGS  +D LL GG+ETGS+TE+FGEFRTGKTQLCH LCVT QLP+D+GGGEGKA+YIDTEGTFRPQRL AIAER+GLD D+VLDNVAFARA+NSE QM LL  ASAMM+E R+ALV+VDSATALFRTDY GRGEL+ RQ +LA+FLR LTRM++EFGVAVV+TNQ+ ANPD   FAKD  +PIGGNI+AHAS TRLRL+KGRGENR+ ++ DSP LPE+E  +SI   GI+D
Sbjct:    4 QYQEEEMDMGAEEHEMQ-GPRLVNILEQAGINATDVNKLKEAGMHTVDAVAMATKKQLVSIKGISEVKAEKMLKAAREMVNVGFTTAADVLESRKDLITLSTGSNAVDELLKGGIETGSITELFGEFRTGKTQLCHQLCVTCQLPVDRGGGEGKALYIDTEGTFRPQRLQAIAERYGLDGDSVLDNVAFARAYNSEHQMQLLIQASAMMAESRFALVIVDSATALFRTDYSGRGELAARQQELAKFLRALTRMADEFGVAVVITNQMTANPDSGMFAKDPLQPIGGNIMAHASCTRLRLKKGRGENRVMKVVDSPILPESEAIYSITEQGIQD 335          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|698796172|ref|XP_009831115.1| (DNA repair protein RAD51 [Aphanomyces astaci] >gi|574113785|gb|ETV79274.1| DNA repair protein RAD51 [Aphanomyces astaci])

HSP 1 Score: 441.425 bits (1134), Expect = 4.993e-152
Identity = 221/348 (63.51%), Postives = 272/348 (78.16%), Query Frame = 0
Query:   29 SIMAAAVAEMQQ-HATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
            ++M +  AE +Q  A  E   G G H  +     I+ LE  GVN +D+ KL EAG+ TV++I  AT R+L  IKGI++ KA K+ + + ++V +GF TAA  +++RKDLI L+TGS  LD LL GG ETGS+TE+FGEFRTGKTQLCH LCVT QLP+D+GGGEGKA++IDTEGTFRPQRLVAIAER+GLD D+VLDNVAFARA+NSE QM LL  ASAMM+E RYALVVVDSATALFRTDY GRGEL+ RQ +LA+FLR LTRM++EFGVAVV+TNQ+ ANPD   FAKD  +PIGGNI+AHAS TRLRL+K RGENR+ ++ DSP LPEAE  +SI   GI+D ++
Sbjct:    3 AMMGSRAAEYEQPEAADEYDGGDGAH--LQGPCGISALEQSGVNASDINKLKEAGFHTVDAIAMATKRQLIGIKGITEAKADKMLKASREMVNVGFTTAADVMQSRKDLITLTTGSSALDELLRGGFETGSITELFGEFRTGKTQLCHQLCVTCQLPVDKGGGEGKALFIDTEGTFRPQRLVAIAERYGLDGDSVLDNVAFARAYNSEHQMQLLSQASAMMAESRYALVVVDSATALFRTDYSGRGELAARQQELAKFLRALTRMADEFGVAVVITNQMTANPDSGMFAKDPLQPIGGNIMAHASCTRLRLKKARGENRVMKVVDSPILPEAEAMYSITEQGIQDEQN 348          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|301098091|ref|XP_002898139.1| (DNA repair protein RAD51 [Phytophthora infestans T30-4] >gi|262105500|gb|EEY63552.1| DNA repair protein RAD51 [Phytophthora infestans T30-4])

HSP 1 Score: 441.039 bits (1133), Expect = 6.194e-152
Identity = 218/333 (65.47%), Postives = 266/333 (79.88%), Query Frame = 0
Query:   40 QHATIEQTSGVGEHEVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIED 372
            Q+   E   GV EHE+    R +  LE  G+N TD+ KL +AG  TV+++  AT ++L  IKGIS+ KA+K+ + A ++V +GF TAA  LE+RKDLI LSTGS  +D LL GG+ETGS+TE+FGEFRTGKTQLCH LCVT QLP+D+GGGEGKA+YIDTEGTFRPQRL AIAER+GLD D+VLDNVAFARA+NSE QM LL  ASAMM+E R+ALV+VDSATALFRTDY GRGEL+ RQ +LA+FLR LTRM++EFGVAVV+TNQ+ ANPD   FAKD  +PIGGNI+AHAS TRLRL+KGRGENR+ ++ DSP LPE+E  +SI   GI+D
Sbjct:    4 QYQEEEMDMGVEEHEMQ-GPRLVNILEQAGINATDVNKLKDAGMHTVDAVAMATKKQLVGIKGISEVKAEKMLKAAREMVNVGFTTAADVLESRKDLITLSTGSNAVDELLKGGIETGSITEMFGEFRTGKTQLCHQLCVTCQLPVDRGGGEGKALYIDTEGTFRPQRLQAIAERYGLDGDSVLDNVAFARAYNSEHQMQLLIQASAMMAESRFALVIVDSATALFRTDYSGRGELAARQQELAKFLRALTRMADEFGVAVVITNQMTANPDSGMFAKDPLQPIGGNIMAHASCTRLRLKKGRGENRVMKVVDSPILPESEAIYSITEQGIQD 335          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|1189389425|gb|OSX76412.1| (hypothetical protein BU14_0192s0029 [Porphyra umbilicalis])

HSP 1 Score: 439.884 bits (1130), Expect = 1.673e-151
Identity = 209/315 (66.35%), Postives = 257/315 (81.59%), Query Frame = 0
Query:   62 ITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMS-FAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
            +TELE H ++ TD+ KL E G+ TVES+ +A  + L ++KGIS+ KA+K++  A KLV MGF TAA Q E R +L++LSTGS+DLD LLGGG+ETG++TE+FGEFRTGKTQLCHTLCVT+Q+P+  GGGEG+A+YIDTEGTFRP+RLV+IAERFG++ + VL+NVA+ARAHNS+ QM LLK ASAMM   RY+LVVVDSATAL+RTDY GRGEL+ RQ  +AQFLR L R+ +EF +A V++NQVVA  DG + F  D  KPIGGNIIAHAS TRL LRKGRGENR+C+IYDSPTLPE+E  FSIG  GI D KD
Sbjct:   28 VTELEQHNISATDVKKLTEGGFSTVESVAYALKKTLMNVKGISEAKAEKLQLEAKKLVNMGFTTAATQHEQRAELVRLSTGSRDLDELLGGGIETGAITELFGEFRTGKTQLCHTLCVTAQMPVSDGGGEGRALYIDTEGTFRPERLVSIAERFGMEPNDVLNNVAYARAHNSDHQMALLKEASAMMVAARYSLVVVDSATALYRTDYSGRGELAARQQHMAQFLRALQRLCDEFCIAAVISNQVVAQVDGAAMFNPDPKKPIGGNIIAHASQTRLSLRKGRGENRVCKIYDSPTLPESEAIFSIGEDGIGDPKD 342          
BLAST of EWM27615.1 vs. NCBI_GenBank
Match: gi|673034376|ref|XP_008871149.1| (DNA repair protein RAD51 [Aphanomyces invadans] >gi|574473120|gb|ETW00124.1| DNA repair protein RAD51 [Aphanomyces invadans])

HSP 1 Score: 439.499 bits (1129), Expect = 2.566e-151
Identity = 211/314 (67.20%), Postives = 258/314 (82.17%), Query Frame = 0
Query:   62 ITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
            I+ LE  G+N +D+ KL +AG+ TV++I  AT R+L  IKGI++ KA K+ + A ++V +GF TAA  +++RKDLI L+TGS  LD LL GG ETGS+TE+FGEFRTGKTQLCH LCVT QLP+D+GGGEGKA+YIDTEGTFRPQRLVAIAER+GLD D+VLDNVAFARA+NSE QM LL  ASAMM+E RYALV+VDSATALFRTDY GRGEL+ RQ +LA+FLR LTRM++EFGVAVV+TNQ+ ANPD   FAKD  +PIGGNI+AHAS TRLRL+K RGENR+ ++ DSP LPEAE  +SI   GI+D ++
Sbjct:   34 ISALEQSGMNASDINKLKDAGFHTVDAIAMATKRQLIGIKGITEAKADKMLKAAREMVNVGFTTAADVMQSRKDLITLTTGSSALDELLRGGFETGSITELFGEFRTGKTQLCHQLCVTCQLPVDKGGGEGKALYIDTEGTFRPQRLVAIAERYGLDGDSVLDNVAFARAYNSEHQMQLLSQASAMMAESRYALVIVDSATALFRTDYSGRGELAARQQELAKFLRALTRMADEFGVAVVITNQMTANPDSGMFAKDPLQPIGGNIMAHASCTRLRLKKARGENRVMKVVDSPILPEAEAMYSITEQGIQDEQN 347          
The following BLAST results are available for this feature:
BLAST of EWM27615.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109883|gb|EWM27615.1|0.000e+0100.00dna repair protein rad51 [Nannochloropsis gaditana... [more]
gi|298713772|emb|CBJ27144.1|0.000e+077.55DNA repair and recombination protein Rad51A [Ectoc... [more]
gi|219119366|ref|XP_002180445.1|1.184e-16868.00Rad51 DNA recombination/repair protein [Phaeodacty... [more]
gi|1210524849|dbj|GAX16358.1|1.185e-16867.54DNA repair protein RAD51 [Fistulifera solaris][more]
gi|1210512687|dbj|GAX28277.1|2.875e-16867.25DNA repair protein RAD51 [Fistulifera solaris][more]
gi|675198449|ref|XP_008908109.1|2.393e-15265.47DNA repair protein RAD51 [Phytophthora parasitica ... [more]
gi|698796172|ref|XP_009831115.1|4.993e-15263.51DNA repair protein RAD51 [Aphanomyces astaci] >gi|... [more]
gi|301098091|ref|XP_002898139.1|6.194e-15265.47DNA repair protein RAD51 [Phytophthora infestans T... [more]
gi|1189389425|gb|OSX76412.1|1.673e-15166.35hypothetical protein BU14_0192s0029 [Porphyra umbi... [more]
gi|673034376|ref|XP_008871149.1|2.566e-15167.20DNA repair protein RAD51 [Aphanomyces invadans] >g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3077rna3077Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications