EWM27605.1, cds3066 (CDS) Nannochloropsis gaditana

Overview
NameEWM27605.1
Unique Namecds3066
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:650325..650344 +
Alignment locationCM002460.1:650414..650589 +
Alignment locationCM002460.1:650660..650745 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27605.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100069g13.5324.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:650325..650344 +
CM002460.1supercontigCM002460.1:650414..650589 +
CM002460.1supercontigCM002460.1:650660..650745 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27605.1 vs. NCBI_GenBank
Match: gi|585109873|gb|EWM27605.1| (hypothetical protein Naga_100069g13 [Nannochloropsis gaditana])

HSP 1 Score: 188.734 bits (478), Expect = 1.097e-60
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 
Query:    1 MLFVQTRQKGAAQSRGDTRKDTRTWTEGHASVIRHAHRCFRAQVRFTQLHHMRRSRVARDHMLWGDGREHLVPEFSDTSSREERQVETIRWQR 93
            MLFVQTRQKGAAQSRGDTRKDTRTWTEGHASVIRHAHRCFRAQVRFTQLHHMRRSRVARDHMLWGDGREHLVPEFSDTSSREERQVETIRWQR
Sbjct:    1 MLFVQTRQKGAAQSRGDTRKDTRTWTEGHASVIRHAHRCFRAQVRFTQLHHMRRSRVARDHMLWGDGREHLVPEFSDTSSREERQVETIRWQR 93
The following BLAST results are available for this feature:
BLAST of EWM27605.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109873|gb|EWM27605.1|1.097e-60100.00hypothetical protein Naga_100069g13 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3074rna3074Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications