EWM27617.1, cds3064 (CDS) Nannochloropsis gaditana

Overview
NameEWM27617.1
Unique Namecds3064
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:647103..647172 +
Alignment locationCM002460.1:647231..647550 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27617.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100069g11.5336.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:647103..647172 +
CM002460.1supercontigCM002460.1:647231..647550 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27617.1 vs. NCBI_GenBank
Match: gi|585109885|gb|EWM27617.1| (hypothetical protein Naga_100069g11 [Nannochloropsis gaditana])

HSP 1 Score: 272.322 bits (695), Expect = 1.234e-92
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 MRFSKGNHGMYHEQQVYRMDGFVQRNRRLPQVECSRAQAVVVRTPKTNQFRLFDGADTHTTSDLNFVRDKQSGGQDCGFAWTASVAPTGGGEKAAVHDPSNLPSPLVPLACAGLPGIRLVLHAIMRAYL 129
            MRFSKGNHGMYHEQQVYRMDGFVQRNRRLPQVECSRAQAVVVRTPKTNQFRLFDGADTHTTSDLNFVRDKQSGGQDCGFAWTASVAPTGGGEKAAVHDPSNLPSPLVPLACAGLPGIRLVLHAIMRAYL
Sbjct:    1 MRFSKGNHGMYHEQQVYRMDGFVQRNRRLPQVECSRAQAVVVRTPKTNQFRLFDGADTHTTSDLNFVRDKQSGGQDCGFAWTASVAPTGGGEKAAVHDPSNLPSPLVPLACAGLPGIRLVLHAIMRAYL 129
The following BLAST results are available for this feature:
BLAST of EWM27617.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109885|gb|EWM27617.1|1.234e-92100.00hypothetical protein Naga_100069g11 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3072rna3072Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications