EWM27625.1, cds3050 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|585109894|gb|EWM27625.1| (protein creg1 [Nannochloropsis gaditana]) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
Query: 1 MRTLLFFLQVSLLWPSVNSDGPLFGRHPRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYLEKCGALYRAESRTRCEWMGVSMRKFFVAQINMWLGRQGLAKRNQHVDLSFYPSLFEENLYMSGSY 266
MRTLLFFLQVSLLWPSVNSDGPLFGRHPRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYLEKCGALYRAESRTRCEWMGVSMRKFFVAQINMWLGRQGLAKRNQHVDLSFYPSLFEENLYMSGSY
Sbjct: 1 MRTLLFFLQVSLLWPSVNSDGPLFGRHPRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYLEKCGALYRAESRTRCEWMGVSMRKFFVAQINMWLGRQGLAKRNQHVDLSFYPSLFEENLYMSGSY 266
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|1012195079|ref|XP_015971621.1| (protein CREG1 isoform X2 [Arachis duranensis] >gi|1193776989|ref|XP_020980910.1| protein CREG1 isoform X2 [Arachis duranensis]) HSP 1 Score: 147.517 bits (371), Expect = 2.446e-40 Identity = 78/181 (43.09%), Postives = 111/181 (61.33%), Query Frame = 0
Query: 21 GPLFGRHPRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYL 201
G +P P A S RWLL ++WGVL+T+ST + GAPFGN S DGP +G +GIPYF+++ LD + ++A + S TVSE + + C LDPE+P C ++T+TG L V D +E FA +LF +H +M+ WP H ++V K+ IF++D +GG KP+SVDEYL
Sbjct: 28 GQFLSIQTKPDPDDSAASARWLLSLNSWGVLNTIST--DLDGAPFGNVVSFSDGPPNEG------SGIPYFYLTTLDPTARNALKDERASFTVSEYPLGT-CGNLDPENPACSKITLTGKLKLVDDSKEAEFARISLFSKHSEMKGWPEGHNFQVFKLEIEDIFLIDWYGGPKPLSVDEYL 199
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|1021531272|ref|XP_016162590.1| (protein CREG1 isoform X2 [Arachis ipaensis]) HSP 1 Score: 147.517 bits (371), Expect = 2.637e-40 Identity = 78/181 (43.09%), Postives = 111/181 (61.33%), Query Frame = 0
Query: 21 GPLFGRHPRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYL 201
G +P P A S RWLL ++WGVL+T+ST + GAPFGN S DGP +G +GIPYF+++ LD + ++A + S TVSE + + C LDPE+P C ++T+TG L V D +E FA +LF +H +M+ WP H ++V K+ IF++D +GG KP+SVDEYL
Sbjct: 28 GQFLSIQTKPDPDDSAASARWLLSLNSWGVLNTIST--DLDGAPFGNVVSFSDGPPNEG------SGIPYFYLTTLDPTARNALKDERASFTVSEYPLGT-CGNLDPENPACSKITLTGKLKLVDDSKEAEFARISLFSKHSEMKGWPEGHNFQVFKLEIEDIFLIDWYGGPKPLSVDEYL 199
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|1012195075|ref|XP_015971620.1| (protein CREG1 isoform X1 [Arachis duranensis]) HSP 1 Score: 147.517 bits (371), Expect = 3.261e-40 Identity = 78/183 (42.62%), Postives = 112/183 (61.20%), Query Frame = 0
Query: 19 SDGPLFGRHPRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYL 201
+ G +P P A S RWLL ++WGVL+T+ST + GAPFGN S DGP +G +GIPYF+++ LD + ++A + S TVSE + + C LDPE+P C ++T+TG L V D +E FA +LF +H +M+ WP H ++V K+ IF++D +GG KP+SVDEYL
Sbjct: 26 AQGQFLSIQTKPDPDDSAASARWLLSLNSWGVLNTIST--DLDGAPFGNVVSFSDGPPNEG------SGIPYFYLTTLDPTARNALKDERASFTVSEYPLGT-CGNLDPENPACSKITLTGKLKLVDDSKEAEFARISLFSKHSEMKGWPEGHNFQVFKLEIEDIFLIDWYGGPKPLSVDEYL 199
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|1021531270|ref|XP_016162589.1| (protein CREG1 isoform X1 [Arachis ipaensis]) HSP 1 Score: 147.517 bits (371), Expect = 3.442e-40 Identity = 78/183 (42.62%), Postives = 112/183 (61.20%), Query Frame = 0
Query: 19 SDGPLFGRHPRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYL 201
+ G +P P A S RWLL ++WGVL+T+ST + GAPFGN S DGP +G +GIPYF+++ LD + ++A + S TVSE + + C LDPE+P C ++T+TG L V D +E FA +LF +H +M+ WP H ++V K+ IF++D +GG KP+SVDEYL
Sbjct: 26 AQGQFLSIQTKPDPDDSAASARWLLSLNSWGVLNTIST--DLDGAPFGNVVSFSDGPPNEG------SGIPYFYLTTLDPTARNALKDERASFTVSEYPLGT-CGNLDPENPACSKITLTGKLKLVDDSKEAEFARISLFSKHSEMKGWPEGHNFQVFKLEIEDIFLIDWYGGPKPLSVDEYL 199
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|168033327|ref|XP_001769167.1| (predicted protein [Physcomitrella patens] >gi|162679593|gb|EDQ66039.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 145.976 bits (367), Expect = 6.617e-40 Identity = 73/172 (42.44%), Postives = 108/172 (62.79%), Query Frame = 0
Query: 29 RPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEY 200
RP P + RWL+ +S WGVLST+S + GAP+GN + DGP +S G P+F++S +D + D + +S SLT+SEA + + C +DPE+P C RLT++G ++E+ D++E FA ALF +HP+M WP H W K+ +I++LD +GG KPV+V EY
Sbjct: 15 RPDPSDAPATARWLVAQSAWGVLSTISI--HLEGAPWGNVAAFSDGPV------GSSGGTPFFYLSRMDPTPNDITLDSRCSLTLSEASLGT-CGSVDPENPTCARLTLSGKMMEITDQQELDFAALALFSKHPEMPDWPKWHKWIFYKLDILNIYLLDNYGGAKPVTVSEY 177
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|291243772|ref|XP_002741774.1| (PREDICTED: protein CREG1-like [Saccoglossus kowalevskii]) HSP 1 Score: 147.902 bits (372), Expect = 8.860e-40 Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = 0
Query: 29 RPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSS--ECAML---DPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYLE 202
RP A R+++H + W V++T+ST P + G F N +L DG DNSTG+PYF+VS LDVS QD N+ V+++ SEA + +C + DPESPLC RL + G +V V+++ E FA +ALF RHP M TWP H W+ K+ + ++++D FGG K + V++Y
Sbjct: 79 RPPYKDIAARARYVVHRADWAVVNTISTQPRMTGLAFSNTNALADG------LPDNSTGVPYFYVSPLDVSIQDIVTNNSVTVSFSEAEFNDIEDCIITSGGDPESPLCTRLVLIGKMVSVIEQSERDFAKKALFTRHPLMPTWPESHNWEFMKLDIKDLWIIDFFGGGKHIPVEDYFN 251
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|595943283|ref|XP_007215957.1| (protein CREG1 [Prunus persica] >gi|1139785585|gb|ONI19412.1| hypothetical protein PRUPE_3G278300 [Prunus persica]) HSP 1 Score: 146.362 bits (368), Expect = 9.945e-40 Identity = 78/201 (38.81%), Postives = 122/201 (60.70%), Query Frame = 0
Query: 6 FFLQVSLLWPSVNSDGPLFGRH---PRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDL-VEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYLE 202
F + L+ + GP+ GR +P P A + RWL+ +++WGVL+T+S+ + GAPFGN S DG +G GIPYF+++ LD + ++A + SLT+SE + + C DPE+P C ++T+TG L + D +ET FA ALF +HP+M+ WP +H ++ K+ +IF++D FGG KP++VD+YL
Sbjct: 9 FVYAICLVSVLLGIQGPVHGRLLSLKKPDPENAAATARWLVSQNSWGVLNTISS--ELGGAPFGNVVSFSDGEPGNG------RGIPYFYLTTLDPTARNALKDQRASLTISEYPIGT-CGKTDPENPTCAKITLTGKLKLADKDSKETEFAKNALFSKHPEMKDWPKNHNFEFFKLDIENIFLIDWFGGPKPLTVDQYLH 200
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|645249267|ref|XP_008230672.1| (PREDICTED: protein CREG1 [Prunus mume]) HSP 1 Score: 145.976 bits (367), Expect = 1.373e-39 Identity = 76/186 (40.86%), Postives = 116/186 (62.37%), Query Frame = 0
Query: 21 GPLFGRH---PRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDL-VEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYLE 202
GP+ GR +P P A + RWL+ +++WGVL+T+S+ + GAPFGN S DG G GIPYF+++ LD + ++A + SLT+SE + + C DPE+P C ++T+TG L + D +ET FA ALF +HP+M+ WP +H ++ K+ +IF++D FGG KP++VD+YL
Sbjct: 24 GPVHGRLLSLKKPDPENAAATARWLVSQNSWGVLNTISS--ELGGAPFGNVVSFSDGEPGKG------RGIPYFYLTTLDPTARNARKDQRASLTISEHPIGT-CGKTDPENPTCAKITLTGKLKLADKDSKETEFAKNALFSKHPEMKDWPKNHNFEFFKLDIENIFLIDWFGGPKPLTVDQYLH 200
BLAST of EWM27625.1 vs. NCBI_GenBank
Match: gi|1111085649|ref|XP_019225277.1| (PREDICTED: protein CREG1 isoform X1 [Nicotiana attenuata] >gi|1102149635|gb|OIT05911.1| hypothetical protein A4A49_40263 [Nicotiana attenuata]) HSP 1 Score: 145.591 bits (366), Expect = 1.729e-39 Identity = 85/212 (40.09%), Postives = 127/212 (59.91%), Query Frame = 0
Query: 4 LLFFLQVSLLWPSVNSDGPLFGRHPRPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVV-DEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEYLEKCGALYRAESRT 214
L+FFL +S + VN PL RP P A RWL+ +S+WGVL+T+++ + GAPFGN S DG D GIPYF+++ LD + ++A + SLT+SE + S C DPE+P C ++T+ G L + D +ET+FA ALF +HP+M+ WP H +++ KI IF+++ FGG KP++VD+YL+ + +SRT
Sbjct: 13 LVFFLALSQEF--VNGR-PLILSLTRPKPDDAALFARWLVSQSSWGVLNTIAS--DMGGAPFGNVVSFSDG------LPDKGRGIPYFYLTTLDPTARNALKDQRSSLTISEYAIGS-CGKTDPENPSCAKITLIGKLKLLNGDPKETSFAQTALFTKHPEMKGWPKGHNFQIFKIEIEEIFMINWFGGPKPLTVDQYLQA-----KMDSRT 207 The following BLAST results are available for this feature:
BLAST of EWM27625.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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