EWM30365.1, cds305 (CDS) Nannochloropsis gaditana

Overview
NameEWM30365.1
Unique Namecds305
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:756110..757744 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30365.1
Productpre-mrna-splicing factor
Orig transcript idgnl|cribi|Naga_100026g10.10619.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:756110..757744 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|585113025|gb|EWM30365.1| (pre-mrna-splicing factor [Nannochloropsis gaditana])

HSP 1 Score: 1128.62 bits (2918), Expect = 0.000e+0
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0
Query:    1 MGRSLLPHPSSLMLSHPSSRLLSIMTTSLADMILGNRKRTCDLYTAEMTSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGALVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            MGRSLLPHPSSLMLSHPSSRLLSIMTTSLADMILGNRKRTCDLYTAEMTSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGALVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW
Sbjct:    1 MGRSLLPHPSSLMLSHPSSRLLSIMTTSLADMILGNRKRTCDLYTAEMTSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGALVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|553182502|ref|XP_005853739.1| (pleiotropic regulator 1 [Nannochloropsis gaditana CCMP526] >gi|422295321|gb|EKU22620.1| pleiotropic regulator 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1030.78 bits (2664), Expect = 0.000e+0
Identity = 496/497 (99.80%), Postives = 497/497 (100.00%), Query Frame = 0
Query:   48 MTSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGALVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            MTSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGA+VAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW
Sbjct:    1 MTSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGAVVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 497          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|298709520|emb|CBJ48535.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 556.599 bits (1433), Expect = 0.000e+0
Identity = 285/518 (55.02%), Postives = 361/518 (69.69%), Query Frame = 0
Query:   29 LADMILGNRKRTCDLYTAEMTSGTTPP-FLPAQKLKVAVKVDQEY-KIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGALVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPA-KVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKR 543
            L  +++ + KRT D++  +   G  PP F+ +QK+KVA K+   Y  +   +P    S+       T+A  N        +        K   T+   I+  +  E+ ++  +Q        + A+R          A G++V  +       P   +     G G ++ L + R  A   P P WHAPWKL +VV+ HLGWVRA+AFDP+NEWFVTGSADRTIKVWDLAK +AGAE  L++TLTGHI+ +R LAVS RHPYLFS AEDK V CWDLE N+V+RHYHGHLSGV+ L+LHPTLDVLVTGGRDSVARVWDMRTK Q+H LGGH+N VG + TN+VDPQ+ITGS+D  IKLWD+VAGK+M TLT+HKKAVR +++HPKE SFVS A DN+KKWQ RDG FL N+SGHN +IN+L++NED+VLVS GDNGSL  WDY TGY FQR++TI QPGSLD EAGI+AS+FD+SG+R +TCEADKTVKIWKED EA+PE+HPIDM AW ++  + KR
Sbjct:   23 LKTVLMKSTKRTLDMFVGQ--EGAPPPTFMASQKIKVASKIAAGYATVKDGAPNGVPSAAAARIGHTAAAANGSNGAAATAAAPAPPAEKPRETEVTRIIQRIDEEKMDKARQQ--------QEANRRLAKGGGAAAADGSLVLFN-------PSSGSVGGGEGKGAANQLVVSRRAAPSAPRPEWHAPWKLSSVVSAHLGWVRAIAFDPSNEWFVTGSADRTIKVWDLAKASAGAEKALKVTLTGHINCIRGLAVSPRHPYLFSAAEDKKVMCWDLEYNRVVRHYHGHLSGVHCLSLHPTLDVLVTGGRDSVARVWDMRTKKQIHALGGHSNAVGTVQTNAVDPQVITGSHDCQIKLWDLVAGKAMTTLTHHKKAVRAVQMHPKEFSFVSAAADNMKKWQGRDGMFLNNMSGHNTIINSLSVNEDSVLVSGGDNGSLCLWDYATGYNFQRIDTIAQPGSLDAEAGIFASSFDVSGSRLVTCEADKTVKIWKEDLEATPESHPIDMVAWAKDYQARKR 523          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|1173955863|gb|OQS02769.1| (pre-mRNA-splicing factor prp46 [Thraustotheca clavata])

HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0
Identity = 268/522 (51.34%), Postives = 338/522 (64.75%), Query Frame = 0
Query:   25 MTTSLADMILGNRKRTCDLYTAEMTSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQ--GKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGALVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            M T+  DM   + K++ +L++AE  +        +Q+  + VK    Y    + P +  S  K+       P    T    P++       +AK E  D       +  E  E+ +     +   +   +  ALV YK      A  S S                     S+AL   R   +VP P WHAPWKL  V+AGHLGWVR++A DP NEWF TGSADR+IKVWDLA       G L+LTLTGHI+ +R LAVS+RHPYLFS AEDK V CWDLE NKVIR YHGHLSGV+ L LHPTLD+LVTGGRD+VARVWDMRTK Q+HVL GH  TV +L T   DPQI++G+ D T+KLWD+ AGK+M TLTNHKKAVR +   P + +F++GA DNLKKWQ +DGKFL+N SGHNA++N+L+IN+DNV VSC DNG++RFWDY TGYCFQ+  TIVQPGSLD EAGIYAS+FD +G R +T EADKT+K+W+ED+ ASPE+HPIDM AW +E  + KR+
Sbjct:    1 MATACVDMETWSVKKSKELFSAEPLAFEGDE--SSQQTHIQVKFRARY---ANVPEIQPSQLKK-------PKLSVTNVPTPAIATSTEVNEAKEEEID-----KDIDAEAVEKAVNAISKQPTAATNTTNSALVEYKKEATFNANFSTS---------------------STALVRRRHAQEVPKPQWHAPWKLKRVIAGHLGWVRSIAVDPTNEWFATGSADRSIKVWDLA------SGQLKLTLTGHINCIRGLAVSDRHPYLFSCAEDKKVLCWDLEYNKVIRSYHGHLSGVFCLKLHPTLDILVTGGRDAVARVWDMRTKQQIHVLSGHQGTVWSLETQPTDPQILSGAADGTVKLWDLAAGKTMTTLTNHKKAVRAMACSPNDHTFLTGAADNLKKWQTKDGKFLRNFSGHNAIVNSLSINQDNVAVSCADNGTMRFWDYTTGYCFQKEATIVQPGSLDSEAGIYASSFDKTGLRLITAEADKTIKVWQEDSSASPESHPIDMTAWTKEYTAPKRF 478          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|698819667|ref|XP_009842862.1| (hypothetical protein H257_16204 [Aphanomyces astaci] >gi|574102049|gb|ETV67605.1| hypothetical protein H257_16204 [Aphanomyces astaci])

HSP 1 Score: 526.939 bits (1356), Expect = 1.089e-180
Identity = 274/532 (51.50%), Postives = 341/532 (64.10%), Query Frame = 0
Query:   27 TSLADMILGNRKRTCDLYTA-EMTSGTTPPFLP---AQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAP-------GNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAAS---RGALVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            TS  D  +   K T  ++ + E+ +G  P F     +QK  + VK    Y      P +  S  K+    T AP        N          +  +G A  E  DTL           E  + Q+  +   + AAS   + ALV YK      A  S +                      SAL   R  A+VP PTWHAPWKL  V+AGHLGWVR++A DP N+WFVTGSADRTIKVWDLA       G L+LTLTGHI+A+R LAVS+RHPY+FS +EDK V CWDLE NKVIR YHGHLSGV+SL LHPTLDVL+TGGRD+VARVWDMRTK QVHVL GH  +V A+ T   +PQ++TG+ DST+KLWD+ AGK M TLTNHKK VR +     + +F++GA DNLKKWQ++DGKFL+N SGHNA++N +++N+DNVLVS  DNGS+RFWDY TGYCF + ETIVQPGSLD EAGIYAS FDM+G R +T EADKT+K+W+E+ +A+PETHPIDM  W +E  + KR+
Sbjct:    8 TSAVDDAIAREKITWSVHRSRELFAGEPPSFETHEDSQKTHIQVKFRARY---ADLPDIQPSQLKKSKLDTVAPVPVISPLDNTPAAEDDEDGVV-EGHATAEPVDTLP-------SAVENAVAQFSKQQEAAAAASNTSQQALVEYKKETTFKAQFSAA----------------------SALVRRRQAAEVPKPTWHAPWKLKRVIAGHLGWVRSIAVDPTNQWFVTGSADRTIKVWDLA------SGQLKLTLTGHINAIRGLAVSDRHPYMFSASEDKKVLCWDLEYNKVIRSYHGHLSGVFSLKLHPTLDVLITGGRDAVARVWDMRTKQQVHVLSGHQGSVWAIETQGTNPQVVTGAADSTVKLWDLAAGKVMTTLTNHKKGVRAMVASRTDHTFLTGAADNLKKWQLKDGKFLRNFSGHNAIVNAVSVNQDNVLVSSADNGSMRFWDYSTGYCFHQEETIVQPGSLDSEAGIYASTFDMTGLRLITAEADKTIKVWEENPDATPETHPIDMVKWTKEFTAPKRY 500          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|1173950207|gb|OQR98184.1| (pre-mRNA-splicing factor prp46 [Achlya hypogyna])

HSP 1 Score: 526.168 bits (1354), Expect = 1.570e-180
Identity = 241/353 (68.27%), Postives = 284/353 (80.45%), Query Frame = 0
Query:  192 GNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            G+S+AL   R   +VP P WHAPWKL  V+AGHLGWVR+VA DP NEWFVTGSADRTIKVWDLA       G L+LTLTGHI+A+R LAVS+RHPYLFS +EDK V CWDLE NKVIR YHGHLSGV+ L +HPTLDVLVTGGRD+VARVWDMRTK Q+HVL GH  TV  L T   DPQI++G+ D T+KLWD+ AGK+M TLTNHKKAVR +   P + SF++GA DNLKKWQ RDGKFL+N SGHNA++N +A+N+DNV VSC DNG++RFWDY TGY FQ+  TIVQPGSLD EAGIYA+ FD +G RF+T EADKT+K+W+EDA A+PETHPIDM AW +E  + KR+
Sbjct:  146 GSSTALVRRRHAHEVPKPQWHAPWKLKRVIAGHLGWVRSVAVDPTNEWFVTGSADRTIKVWDLA------SGQLKLTLTGHINAIRGLAVSDRHPYLFSCSEDKKVLCWDLEYNKVIRSYHGHLSGVFCLKVHPTLDVLVTGGRDAVARVWDMRTKQQIHVLSGHQGTVWCLETQPTDPQILSGAADGTVKLWDLAAGKAMTTLTNHKKAVRAMACSPNDHSFLTGAADNLKKWQTRDGKFLRNFSGHNAIVNAVAMNQDNVAVSCADNGTMRFWDYTTGYNFQKEATIVQPGSLDSEAGIYAATFDKTGLRFITAEADKTIKVWQEDASATPETHPIDMAAWTKEYTAPKRF 492          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|673016312|ref|XP_008862117.1| (hypothetical protein H310_00925 [Aphanomyces invadans] >gi|574481320|gb|ETW08312.1| hypothetical protein H310_00925 [Aphanomyces invadans])

HSP 1 Score: 525.398 bits (1352), Expect = 3.343e-180
Identity = 237/356 (66.57%), Postives = 285/356 (80.06%), Query Frame = 0
Query:  189 AGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            A    SSAL   R  A+VP PTWHAPWKL  V+AGHLGWVR++A DP N+WFVTGSADRTIKVWDLA       G L+LTLTGHI+A+R LAVS+RHPY+FS +EDK V CWDLE NKVIR YHGHLSGV+SL LHPTLDVL+TGGRD+VARVWDMRTK QVHVL GH  +V A+ T   DPQ++TG+ DST+KLWD+ AGK M TLTNHKK VR +     + +F++GA DNLKKWQ +DGKFL+N SGHNA++N +++N+DNVLVS  DNGS+RFWDY TGYCF   ETIVQPGSLD EAG++AS FDM+G RF+T EADKT+K+W+E+ +A+PETHPIDM  W +E  + KR+
Sbjct:  145 AQFQASSALVRRRQAAEVPKPTWHAPWKLKRVIAGHLGWVRSIAVDPTNQWFVTGSADRTIKVWDLA------SGQLKLTLTGHINAIRGLAVSDRHPYMFSASEDKKVLCWDLEYNKVIRSYHGHLSGVFSLKLHPTLDVLITGGRDAVARVWDMRTKQQVHVLSGHQGSVWAIETQGTDPQVVTGAADSTVKLWDLAAGKVMTTLTNHKKGVRAMAASRTDHTFLTGAADNLKKWQHKDGKFLRNFSGHNAIVNAVSVNQDNVLVSSADNGSMRFWDYTTGYCFHEEETIVQPGSLDSEAGVFASTFDMTGLRFITTEADKTIKVWEENPDATPETHPIDMVKWTKEFTAPKRY 494          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|676396695|ref|XP_009041625.1| (hypothetical protein AURANDRAFT_33675, partial [Aureococcus anophagefferens] >gi|323447786|gb|EGB03696.1| hypothetical protein AURANDRAFT_33675, partial [Aureococcus anophagefferens])

HSP 1 Score: 514.612 bits (1324), Expect = 2.136e-178
Identity = 229/336 (68.15%), Postives = 278/336 (82.74%), Query Frame = 0
Query:  209 PTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            P WH PWKL AVV+GHLGWVR+VAF+P NEWF TG ADRTIK+WDLAKCAAGAEGGL+LTLTGHI+A+R LAVS R  Y+FS  EDK V CWDLE NKV+RHYHGHLSGVYSLALHPTLD+L+TGGRDS  RVWD+RT  QV +LGGH NT+GA+A N+ DPQ+ITGS+D T+KLWD+  G++++TLT+HKKA+R L V P E SF SGA DN+KKWQ +DG FL+NLSGH+A++N + +N+D VL S  D+GSLR WDY+TGY FQ+L T+ QPGSL CEAGIY + FD SG+R +TCEADKT+KIWKED  A+P++ P+DM AW +EC   KR+
Sbjct:    1 PAWHPPWKLAAVVSGHLGWVRSVAFEPRNEWFATGGADRTIKIWDLAKCAAGAEGGLKLTLTGHINAIRGLAVSARTTYMFSAGEDKKVMCWDLETNKVVRHYHGHLSGVYSLALHPTLDLLMTGGRDSCVRVWDVRTSKQVMMLGGHVNTIGAIACNASDPQVITGSHDCTVKLWDLAKGRALSTLTHHKKAIRSLAVAPFEFSFASGAADNIKKWQCKDGAFLRNLSGHDAIVNAVDVNDDGVLASAADDGSLRLWDYRTGYGFQKLHTVAQPGSLQCEAGIYDAKFDRSGSRLVTCEADKTLKIWKEDTHATPDSDPVDMAAWTKECRRLKRY 336          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|669137850|ref|XP_008604493.1| (hypothetical protein SDRG_00779 [Saprolegnia diclina VS20] >gi|530743682|gb|EQC41924.1| hypothetical protein SDRG_00779 [Saprolegnia diclina VS20])

HSP 1 Score: 518.85 bits (1335), Expect = 1.048e-177
Identity = 239/350 (68.29%), Postives = 279/350 (79.71%), Query Frame = 0
Query:  195 SALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            +AL   R   +VP P WHAPWKL  V+AGHLGWVR+VA DP NEWFVTGSADRTIKVWDLA       G L+LTLTGHI+A+R LAVS+RHPYLFS +EDK V CWDLE NKVIR YHGHLSGV+SL LHPTLDVLVTGGRD+VARVWDMRTK Q+HVL GH  TV  L T   DPQI++G+ D T+KLWD+ AGK+M TLTNHKKAVR +   P + SF++GA DNLKKWQ RDGKFL+NLSGHNA+IN + +N+DNV VS  DNG++RFWDY TGY FQ+  TIVQPGSLD EAGIYA+ FD +G R +T EADKT+KIW+EDA A+PE+HPIDM  W +E  + KR+
Sbjct:  148 TALVRRRLAQEVPKPQWHAPWKLKRVIAGHLGWVRSVAVDPTNEWFVTGSADRTIKVWDLA------SGQLKLTLTGHINAIRGLAVSDRHPYLFSCSEDKKVLCWDLEYNKVIRSYHGHLSGVFSLKLHPTLDVLVTGGRDAVARVWDMRTKQQIHVLSGHQGTVWCLETQPTDPQILSGAADGTVKLWDLAAGKAMTTLTNHKKAVRAMACSPNDHSFLTGAADNLKKWQTRDGKFLRNLSGHNAIINAVCMNQDNVAVSAADNGTMRFWDYTTGYNFQKEATIVQPGSLDSEAGIYAATFDKTGLRLITAEADKTIKIWQEDATATPESHPIDMSGWTKEFTAPKRF 491          
BLAST of EWM30365.1 vs. NCBI_GenBank
Match: gi|301120828|ref|XP_002908141.1| (pre-mRNA-splicing factor prp46, putative [Phytophthora infestans T30-4] >gi|262103172|gb|EEY61224.1| pre-mRNA-splicing factor prp46, putative [Phytophthora infestans T30-4])

HSP 1 Score: 520.005 bits (1338), Expect = 1.482e-177
Identity = 269/529 (50.85%), Postives = 341/529 (64.46%), Query Frame = 0
Query:   43 LYTAEM------TSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETR-----------------HRGPSVL-AGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGS---RAASRGALVAYKGNDAGGAMVSRSNKRDGRTPPGAAAAAAAGIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHISAVRALAVSNRHPYLFSVAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALHPTLDVLVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGALATNSVDPQIITGSYDSTIKLWDIVAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKKWQVRDGKFLKNLSGHNAVINTLAINEDNVLVSCGDNGSLRFWDYQTGYCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544
            L TAEM      ++ +   + P++K++V  K++  Y     S  +   +  +  ++T  P    TR                 H  PSV           A +  + ++ +  +EAE EL   + K   S   R AS  A+V YK                         A AA  G+S  + + R   +VP P WHAPWKL  V+AGHLGWVR+++ DP N+WFVTGSADRTIKVWDLA       G L+LTLTGHI+A+R L VS RHPYLFS  EDK V CWDLE NKVIR YHGHLSGV+SL +HPTLD+LVTGGRD+VARVWDMRTK Q+HVL GH  TV A+ T + DPQIITGS DST+KLWD+ AGK M TLTNHKKAVR +   P + +F+SGA DN+KKW+ ++G+FL+N S HNA+IN+++IN+D V+ SCGDNGS+RFWDYQTGYCFQ   T  QPGSLD E GIYASAFD +G RF+TCEADKT+K+W+ED+ AS E+HPIDM  W ++  + KR+
Sbjct:   27 LRTAEMFALTKRSAASAYDYAPSKKVRVRTKLNDTYLFEFPSALLEFKAVAEAVDSTPPPIAAATRIAPGPAPAAQADVVMGGHPLPSVPDVSTAIEDTTAAEKPSFVDQV-AKEAEEELALKKRKLVASNVDREAS-SAVVEYKKQ----------------------TATAAQFGSS--VIVRRRATQVPKPKWHAPWKLKRVIAGHLGWVRSISVDPTNDWFVTGSADRTIKVWDLA------SGQLKLTLTGHINAIRGLEVSPRHPYLFSAGEDKKVLCWDLEYNKVIRSYHGHLSGVFSLKVHPTLDILVTGGRDAVARVWDMRTKNQIHVLSGHQGTVWAMETQATDPQIITGSSDSTVKLWDLAAGKVMTTLTNHKKAVRAVTKSPTDHTFMSGAADNMKKWEAKEGRFLRNFSTHNAIINSISINQDGVMASCGDNGSMRFWDYQTGYCFQSDSTKAQPGSLDSETGIYASAFDKTGLRFITCEADKTIKVWQEDSSASEESHPIDMAEWTKDFTAPKRY 523          
The following BLAST results are available for this feature:
BLAST of EWM30365.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113025|gb|EWM30365.1|0.000e+0100.00pre-mrna-splicing factor [Nannochloropsis gaditana... [more]
gi|553182502|ref|XP_005853739.1|0.000e+099.80pleiotropic regulator 1 [Nannochloropsis gaditana ... [more]
gi|298709520|emb|CBJ48535.1|0.000e+055.02conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173955863|gb|OQS02769.1|0.000e+051.34pre-mRNA-splicing factor prp46 [Thraustotheca clav... [more]
gi|698819667|ref|XP_009842862.1|1.089e-18051.50hypothetical protein H257_16204 [Aphanomyces astac... [more]
gi|1173950207|gb|OQR98184.1|1.570e-18068.27pre-mRNA-splicing factor prp46 [Achlya hypogyna][more]
gi|673016312|ref|XP_008862117.1|3.343e-18066.57hypothetical protein H310_00925 [Aphanomyces invad... [more]
gi|676396695|ref|XP_009041625.1|2.136e-17868.15hypothetical protein AURANDRAFT_33675, partial [Au... [more]
gi|669137850|ref|XP_008604493.1|1.048e-17768.29hypothetical protein SDRG_00779 [Saprolegnia dicli... [more]
gi|301120828|ref|XP_002908141.1|1.482e-17750.85pre-mRNA-splicing factor prp46, putative [Phytopht... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna305rna305Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications