EWM27641.1, cds3043 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|585109911|gb|EWM27641.1| (dna topoisomerase i [Nannochloropsis gaditana]) HSP 1 Score: 1501.88 bits (3887), Expect = 0.000e+0 Identity = 730/730 (100.00%), Postives = 730/730 (100.00%), Query Frame = 0 Query: 1 MSESEEEEESEEDGRVTKKKVSAKKKTKGAVPKKTTTKAAPKTKRKPALKSKKPTVKKEAKGELPKTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRFEGTSKPEM 730 MSESEEEEESEEDGRVTKKKVSAKKKTKGAVPKKTTTKAAPKTKRKPALKSKKPTVKKEAKGELPKTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRFEGTSKPEM Sbjct: 1 MSESEEEEESEEDGRVTKKKVSAKKKTKGAVPKKTTTKAAPKTKRKPALKSKKPTVKKEAKGELPKTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRFEGTSKPEM 730
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|1210522534|dbj|GAX18547.1| (DNA topoisomerase I [Fistulifera solaris]) HSP 1 Score: 699.893 bits (1805), Expect = 0.000e+0 Identity = 376/685 (54.89%), Postives = 485/685 (70.80%), Query Frame = 0 Query: 53 KPTVKKEAKGELPKTALSS-----KAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGED-EADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDF--ASYGEN---GKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVE---DLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKD-DVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 KP K + KTA+ + KA R++ AM++F WWD P+G QWR +EH+G+ FP +YVPHG+KM YDGK+V+L EE ATFFA+M P+G LG P T KIF+KN+F F E+L K IKDF KCDF PIR HL QK+IKKA T E++ K + + +GYAIVDG IEKVGN+NMEPPG FRGRG HP MG +K+R PE + +NL A VP C +PGHAW ++HD + WLA+WKEN+ N KY+ LAA SSFKGKSD KY+KAA L I +IR+ Y+ +L K D+E KQ+ATA+W+ID+LALRVGGEK D EADTVGCCSLR+EHL F P E GGE+ EI+LEFLGKDSML+KQTIDF A Y EN G+QV++N + F K KKP+Q+VF+ + P++LN HL + M GLSAKVFRTYNAS+TLQ+EL E ++ +KVV YN+ANR+VAILCNHQR+V+K ETAL + +L LK QKKEL + L SG ++ + RK + +T+ KA++KA+ +++ A T EEKI A+ A ++AK+ KR K + AHL+ + PTK+Q+ ++IE W KI K+E+D+++KD+NKEV+LGTSKINYMDPRISVA+CKR EVPIE+IF+KTLRDKF WAM V P+W F Sbjct: 91 KPDKPKSDDTAMKKTAVKALKKLDKAERLQYAMQSFLWWDSVEPPEGCQWRTMEHSGVSFPEEYVPHGIKMKYDGKDVDLTPVQEEAATFFAAMDPEGMHLGDPKTAKIFIKNYFADFLEVLGKKH----VIKDFKKCDFEPIRRHLNEQKIIKKAITDEQRKANKDDRNQVMFRFGYAIVDGHIEKVGNYNMEPPGTFRGRGEHPKMGKLKQRVAPEQVSLNLSQCAAVPRCSVPGHAWGDIKHDPRGQWLATWKENINNQSKYMQLAAQSSFKGKSDRSKYNKAALLCSNIEKIRKSYKKDL-KSKDQETKQLATAVWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLEFDPNGE-GGENR-----EIKLEFLGKDSMLYKQTIDFGAAMYNENNGMGEQVYENFKSFCKKKKPDQEVFDSINPTLLNQHLKTFMDGLSAKVFRTYNASKTLQDELRKHEAGSQWKNLTATEKVVEYNNANREVAILCNHQRSVSKAQETALEAIGSKLATLKKQKKELKQMLKKLNSGDSSGLPVRKSFEEMTEDVQKAIEKAKKMKEAAKTNEEKIAATQADEKAKQKKRDLADKKFQKAHLWEKVPTKDQLVKRIEAWTAKINKMEMDLKHKDDNKEVSLGTSKINYMDPRISVAFCKRNEVPIEKIFSKTLRDKFNWAMAVQPNWEF 764
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|1210515971|dbj|GAX25056.1| (DNA topoisomerase I [Fistulifera solaris]) HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0 Identity = 372/685 (54.31%), Postives = 481/685 (70.22%), Query Frame = 0 Query: 53 KPTVKKEAKGELPKTALSS-----KAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGED-EADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFAS--YGEN---GKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVE---DLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKD-DVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 KP K + KTA+ + KA R++ AM++F WWD P+G QWR +EH+G+ FP +YVPHG+KM YDGK+V+L EE ATFFA+M P+G LG P T KIF+KN+F F E+L K IKDF KCDF PIR HL QK+IKKA T E++ K + + +GYAIVDG IEKVGN+NMEPPG FRGRG HP MG +K+R PE + +NL A VP C +PGHAW ++HD + WLA+WKEN+ N KY+ LAA SSFKGKSD KY+KAA L I +IR+ Y+ +L K D+E KQ+ATA+W+ID+LALRVGGEK D EADTVGCCSLR+EHL F P GE G EI+LEFLGKDSML+KQTIDF + Y EN G+QV++N + F K KKP+Q+VF+ + P++LN HL + M GLSAKVFRTYNAS+TLQ+EL E ++ +KVV YN+ANR+VAILCNHQR+V+K ETAL + +L LK QKK+L + L SG ++ + RK + + + KA++KA+ +++ A T EEKI A+ A ++AK+ KR K + AHL+ + PTK+Q+ ++IE W KI K+E+D+++KD+NKEV+LGTSKINYMDPRISVA+CKR EVPIE+IF+KTLRDKF WAM V P W F Sbjct: 95 KPDKPKSDDTAMKKTAIKALKKLDKAERLQYAMQSFLWWDSVEPPEGCQWRTMEHSGVSFPEEYVPHGIKMKYDGKDVDLTPAQEEAATFFAAMDPEGMHLGDPKTAKIFIKNYFADFLEVLGKKH----IIKDFKKCDFEPIRRHLNEQKIIKKAITDEQRKANKDDRNQVMFRFGYAIVDGHIEKVGNYNMEPPGTFRGRGEHPKMGKLKQRVAPEQVSLNLSQCAAVPRCSVPGHAWGDIKHDPRGQWLATWKENINNQSKYMQLAAQSSFKGKSDRSKYNKAALLCSNIEKIRKSYKKDL-KSKDQETKQLATAVWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLEFDP----NGE--GGVNREIKLEFLGKDSMLYKQTIDFGATMYNENNGMGEQVYENFKSFCKKKKPDQEVFDSINPTLLNQHLKTFMDGLSAKVFRTYNASKTLQDELRKHEAGSQWKNLTATEKVVEYNNANREVAILCNHQRSVSKAQETALEAIGSKLATLKKQKKDLKQMLKKLNSGDSSGLPVRKSFEEMAEDVQKAVEKAKKMKEAAKTNEEKIAATQADEKAKQKKRDLADKKFQKAHLWEKVPTKDQLVKRIEAWTAKINKMEMDLKHKDDNKEVSLGTSKINYMDPRISVAFCKRNEVPIEKIFSKTLRDKFNWAMAVQPDWEF 768
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|325188249|emb|CCA22788.1| (DNA topoisomerase putative [Albugo laibachii Nc14]) HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0 Identity = 358/699 (51.22%), Postives = 459/699 (65.67%), Query Frame = 0 Query: 25 KKTKGAVPKKTTTKAAPKTKRKPALKSKKPTVKKEAKGELPKTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAG-MSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 +K K +K+TTK++ K KR+ ++ K +K + K + SKA R++ A+KA++WW E LP+GIQWR LEHNG+FFPP Y PHG+ +LY GK VEL EEV +F+A++PPDGPQLG+P TRKIF +NFF +++L + IK FD CDFS IR HL+ + KK + EEK L K KE Q G+AIVDG +EKVGN+ +EPPGLFRGRG HP G +KER LPE + VN+G RVP C +PGHAW V H + V+WLA W ENV+ G+KYV LAASSSFKGKSDM KY+KA +LK+ I RIR+DY L K DR +Q +TAMW+ID LALRVG EKGEDEADTVGCCSLR+EH+ F E+ L FLGKDSM + T+ A YG+ GKQV+ NL+ F K VF+ L S LN HL SLMPGL+AKVFRT+NAS TL+ ELP D G + KVVAYNDANR+VAILCNHQRTV K+ + L + +L LK+Q ++L + L++SGK+ I+ ++ A + D+ ED + + K+L AK HLF + P+ EQV ++ E W++K+ L + +++K +NK+VALGTSKINYMDPRISVAWCKR EVPI +FAKTLR+KFVWAM P W+F Sbjct: 97 QKRKICSKEKSTTKSSKKPKREVKVQIKTEVTRKS----VHKLKVHSKAERLDMAIKAYRWWKAEELPEGIQWRTLEHNGVFFPPAYFPHGIPLLYQGKSVELTPAQEEVVSFYAAIPPDGPQLGNPKTRKIFNQNFFQDLQKLLGK----NHTIKKFDLCDFSLIRQHLDVAREEKKNRSKEEKQLEKERKELEQFTNGFAIVDGHLEKVGNYRIEPPGLFRGRGEHPKTGTLKERVLPEEVTVNVGISDRVPICNMPGHAWKEVIHRDTVSWLAYWNENVMGGIKYVWLAASSSFKGKSDMIKYEKARQLKKHIDRIRKDYTSGL-KAKDRSTQQRSTAMWVIDVLALRVGNEKGEDEADTVGCCSLRVEHMSF-----------NDDNCELTLAFLGKDSMPYNNTVTLAQYGQVGKQVYSNLKLFCHKKSKNDQVFDELATSDLNKHLSSLMPGLTAKVFRTFNASVTLEKELPYALDPDGKLETNVKVVAYNDANREVAILCNHQRTVPKSFDNTLEKMTAQLDQLKEQLQDLKKMQVLIQSGKSMSIQLKQST-----ANENGDEKEDQK-----------------DLKDL-----LAKKAQNHLFPKTPSLEQVKKRTEAWKKKMNTLAIRLQDKSDNKQVALGTSKINYMDPRISVAWCKRNEVPISAVFAKTLREKFVWAMDAAPDWKF 748
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|298711983|emb|CBJ32924.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 680.248 bits (1754), Expect = 0.000e+0 Identity = 365/686 (53.21%), Postives = 459/686 (66.91%), Query Frame = 0 Query: 41 PKTKRKPALKSKKPTV--KKEAKGELPKT--ALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 P +R A +S+ P K +AK + PK ++++A +IE+AMK + WW++ G QW +LEHNG F P+Y PHGVK+ YDGKEV L + EEVATF+ASMP DGPQL + K+F KNFF FK +L IKDF DFS IRAHL+ K IK AAT EKA K KEE Y YAIVDG +EKVGN+N+EPPGLFRGRG HP G +K R +I +N VP C +PG+AW VQH+ TWL+ W + +L G KY+MLAASSSFKGKSDM KYDKA +LK I RIR DY L +DR KQIATA+WIIDKLALRVGGEKG+DEADTVGCCSLR EHL F A EI+LEFLGKDSMLFK+TIDF YG+ G++VFKNL+ F K K+ ++VF+ L PS+LN HL SLMPGL+AKVFRTYNAS+TLQ +LP LAG+SV +KV YN ANR+VAILCNHQRTV+ + L ++RL +L QK+EL +KSGK + D + AV+A++KA+ + A T EK+ A+ A + AK L++ AQ A+ + HLFA+ P+ E V+ +I++W +KI KL++ IR++D+NKEV+L TSKINYMDP R+FAKTL++KFVWAM VPP W F Sbjct: 308 PSGRRGAASQSRAPPPRPKAQAKDKAPKGFKEMTTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVHLTTQQEEVATFYASMPLDGPQLA--EQGKVFNKNFFTDFKAVLGKGHV----IKDFKLLDFSAIRAHLDITKQIKLAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCAEGVCVPRCNMPGYAWQSVQHNPSATWLSKW-DGLLAGTKYMMLAASSSFKGKSDMAKYDKAMKLKGFIERIRTDYVKKLSS-SDRRTKQIATAVWIIDKLALRVGGEKGQDEADTVGCCSLRTEHLTF-----------HATNNEIDLEFLGKDSMLFKETIDFDRYGDVGRRVFKNLQAFCKGKRQSEEVFDYLDPSILNLHLQSLMPGLTAKVFRTYNASDTLQQKLPGEAALAGLSVAEKVALYNLANREVAILCNHQRTVSSAQKEGLEKQRDRLAMLTKQKQELKQMLRTIKSGKGSVPLKSNDKSQEESAVRALEKAKKAKANAKTNAEKVAATKAGETAKALRKAAQQARQEAMHLFAKNPSAESVEERIKRWGDKIKKLQIVIRDRDDNKEVSLSTSKINYMDP---------------RVFAKTLQNKFVWAMNVPPDWNF 959
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|635370408|emb|CCI41458.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0 Identity = 353/702 (50.28%), Postives = 462/702 (65.81%), Query Frame = 0 Query: 23 AKKKTKGAVPKKTTTKAAPKTKRKPALKSKKPTVKKEAKGELPKTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEML-KDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAG-MSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 +K K + +K T+ A P K K +K + T + + + K + SKA R++ A+KA++WW E LP+GIQWR LEHNG+FFPP Y PHGV +LY GK ++L EE+ +F+A++PPDGPQLG+P TRKIF +NFF +++L K+ + IKDFD CDFS IR HL+ + KK T EEK L K KE Q G+AIVDG +EKVGN+ +EPPGLFRGRG HP G +KER LPE + VN+G RVP C +PGHAW V H + V+WLA W ENV+ G+KYV LAASSSFKGKSDM KY+KA +LK+ I RIR++Y L K DR +Q +TAMW+ID LALRVG EKGEDEADTVGCCSLR+EH+ F + E+ L FLGKDSM + T+ A YG+ GKQV+ NL+ F K VF+ L S LN HL SLMPGL+AKVFRT+NAS TL+ ELP D G + KVVAYNDANR+VAILCNHQRTV K+ + L + +L LK+Q ++L + ++SGK+ I+ +++ ++ D ++K + K+LK AK +HLF + P+ EQV ++ + W++K+ L + +++K +NK+VALGTSKINYMDPRI+VAWCKR EVPI +FAKTLR+KFVWAM P W+F Sbjct: 95 SKSVQKRKICQKETSSANPSKKPKREVKVQIKT--EVTRKSVHKLKVHSKAERLDMAIKAYRWWKAEELPEGIQWRTLEHNGVFFPPAYAPHGVSLLYKGKPLKLTPAQEEIVSFYAAIPPDGPQLGNPKTRKIFNQNFFQDLQKLLGKNHI-----IKDFDLCDFSLIRQHLDVTREEKKNRTKEEKQLEKERKELDQFTNGFAIVDGHLEKVGNYRIEPPGLFRGRGEHPKTGTLKERVLPEEVTVNVGISDRVPVCNMPGHAWKEVIHRDTVSWLAYWNENVMGGIKYVWLAASSSFKGKSDMIKYEKARQLKKHIDRIRKNYTSGL-KAKDRSTQQRSTAMWVIDVLALRVGNEKGEDEADTVGCCSLRVEHMSF-----------NDENCELTLAFLGKDSMPYNNTVTLAQYGQVGKQVYSNLKMFCHKKSKMDQVFDELATSDLNKHLSSLMPGLTAKVFRTFNASVTLEKELPYALDPDGKLDTNVKVVAYNDANREVAILCNHQRTVPKSFDNTLEKMTAQLDQLKEQLQDLKKMQTFIQSGKSKSIQLKQN---------VANENGDEKEKG--------------DQKDLK--DLLAKKAQSHLFPKTPSLEQVKKRSDAWKKKVNTLAIRLQDKSDNKQVALGTSKINYMDPRITVAWCKRNEVPISAVFAKTLREKFVWAMDATPDWKF 752
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|970646544|gb|KUF86662.1| (DNA topoisomerase 1 [Phytophthora nicotianae] >gi|970650165|gb|KUF89261.1| Monoterpene epsilon-lactone hydrolase [Phytophthora nicotianae]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 347/662 (52.42%), Postives = 439/662 (66.31%), Query Frame = 0 Query: 66 KTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELP-----TVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 K + SK+ R++ A+KAF+WW+ E LP+GIQWR LEHNG+ FPP Y PH V +LY+GKE+EL EEVA+F+A++P DGPQLG+P T KIF KNFF FK++L + E +K F+ CDFS I AHLE + KK T EEK K +E G+A VDG +EKVGNF +EPPGLFRGRG HP G +KER +PE++ VN+G RVP C +PGHAW +V H + V+WLA W ENV+ G+KYV AASSSFKGKSD+ KY+KA RLK+CI +IRRDY L K D KQ +TAMW+ID LALRVG EKGEDEADTVGCCSLR+EH+ F + + L FLGKDSM + T++ A YG+ GKQV+ NL+ F K ++VF L+ + LN HL SLMPGLSAKVFRT+NAS TL+ ELP ++ M V KVV YNDANRKVAILCNHQRT K+ +T L + +L LKDQ K+L ++L+ +GK + I+ +K+ +DK A+ AK AHLF R P+ +QV +KIE W++KI L L +++K +NKEVALGTSK+NYMDPRI+VAWCKR EVPI +F+KTLR+KFVWAM V P W+F Sbjct: 133 KLKVHSKSERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPPPYKPHHVPLLYNGKEIELTPSQEEVASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGKQHE----VKTFEGCDFSRIAAHLEKLREEKKNMTKEEKLPEKEKREMEVFTNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPEDVTVNVGISDRVPICNVPGHAWKQVIHRDTVSWLAYWNENVMGGIKYVFFAASSSFKGKSDLAKYEKARRLKKCIDKIRRDYTKGL-KAKDMFTKQRSTAMWVIDVLALRVGNEKGEDEADTVGCCSLRVEHMSF-----------NDENCALTLSFLGKDSMPYNNTVELAQYGDVGKQVYHNLQKFCAKKGKNEEVFHELSVTELNKHLSSLMPGLSAKVFRTFNASFTLEKELPGPSGQELDPQGKMEVAPKVVLYNDANRKVAILCNHQRTAPKSFDTTLDKMNAQLGQLKDQLKDLKQMQKLISTGKASSIKLKKEKPASDKEEDAL-----------------------------------AKKAQAHLFQRTPSADQVTKKIENWKKKIKALSLRLQDKTDNKEVALGTSKLNYMDPRITVAWCKRNEVPISAVFSKTLREKFVWAMDVNPDWKF 743
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|970635673|gb|KUF80521.1| (DNA topoisomerase 1 [Phytophthora nicotianae]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 347/662 (52.42%), Postives = 439/662 (66.31%), Query Frame = 0 Query: 66 KTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELP-----TVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 K + SK+ R++ A+KAF+WW+ E LP+GIQWR LEHNG+ FPP Y PH V +LY+GKE+EL EEVA+F+A++P DGPQLG+P T KIF KNFF FK++L + E +K F+ CDFS I AHLE + KK T EEK K +E G+A VDG +EKVGNF +EPPGLFRGRG HP G +KER +PE++ VN+G RVP C +PGHAW +V H + V+WLA W ENV+ G+KYV AASSSFKGKSD+ KY+KA RLK+CI +IRRDY L K D KQ +TAMW+ID LALRVG EKGEDEADTVGCCSLR+EH+ F + + L FLGKDSM + T++ A YG+ GKQV+ NL+ F K ++VF L+ + LN HL SLMPGLSAKVFRT+NAS TL+ ELP ++ M V KVV YNDANRKVAILCNHQRT K+ +T L + +L LKDQ K+L ++L+ +GK + I+ +K+ +DK A+ AK AHLF R P+ +QV +KIE W++KI L L +++K +NKEVALGTSK+NYMDPRI+VAWCKR EVPI +F+KTLR+KFVWAM V P W+F Sbjct: 133 KLKVHSKSERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPPPYKPHHVPLLYNGKEIELTPSQEEVASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGKQHE----VKTFEGCDFSRIAAHLEKLREEKKNMTKEEKLPEKEKREMEVFTNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPEDVTVNVGISDRVPICNVPGHAWKQVIHRDTVSWLAYWNENVMGGIKYVFFAASSSFKGKSDLAKYEKARRLKKCIDKIRRDYTKGL-KAKDMFTKQRSTAMWVIDVLALRVGNEKGEDEADTVGCCSLRVEHMSF-----------NDENCALTLSFLGKDSMPYNNTVELAQYGDVGKQVYHNLQKFCAKKGKNEEVFHELSVTELNKHLSSLMPGLSAKVFRTFNASFTLEKELPGPSGQELDPQGKMEVAPKVVLYNDANRKVAILCNHQRTAPKSFDTTLDKMNAQLGQLKDQLKDLKQMQKLISTGKASSIKLKKEKPASDKEEDAL-----------------------------------AKKAQAHLFQRTPSADQVTKKIENWKKKIKALSLRLQDKTDNKEVALGTSKLNYMDPRITVAWCKRNEVPISAVFSKTLREKFVWAMDVNPDWKF 743
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|570966771|gb|ETP29890.1| (hypothetical protein F442_21013 [Phytophthora parasitica P10297] >gi|570966772|gb|ETP29891.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297] >gi|570966773|gb|ETP29892.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570966774|gb|ETP29893.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 347/662 (52.42%), Postives = 439/662 (66.31%), Query Frame = 0 Query: 66 KTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELP-----TVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 K + SK+ R++ A+KAF+WW+ E LP+GIQWR LEHNG+ FPP Y PH V +LY+GKE+EL EEVA+F+A++P DGPQLG+P T KIF KNFF FK++L + E +K F+ CDFS I AHLE + KK T EEK K +E G+A VDG +EKVGNF +EPPGLFRGRG HP G +KER +PE++ VN+G RVP C +PGHAW +V H + V+WLA W ENV+ G+KYV AASSSFKGKSD+ KY+KA RLK+CI +IRRDY L K D KQ +TAMW+ID LALRVG EKGEDEADTVGCCSLR+EH+ F + + L FLGKDSM + T++ A YG+ GKQV+ NL+ F K ++VF L+ + LN HL SLMPGLSAKVFRT+NAS TL+ ELP ++ M V KVV YNDANRKVAILCNHQRT K+ +T L + +L LKDQ K+L ++L+ +GK + I+ +K+ +DK A+ AK AHLF R P+ +QV +KIE W++KI L L +++K +NKEVALGTSK+NYMDPRI+VAWCKR EVPI +F+KTLR+KFVWAM V P W+F Sbjct: 133 KLKVHSKSERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPPPYKPHHVPLLYNGKEIELTPSQEEVASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGKQHE----VKTFEGCDFSRIAAHLEKLREEKKNMTKEEKLPEKEKREMEVFTNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPEDVTVNVGISDRVPICNVPGHAWKQVIHRDTVSWLAYWNENVMGGIKYVFFAASSSFKGKSDLAKYEKARRLKKCIDKIRRDYTKGL-KAKDMFTKQRSTAMWVIDVLALRVGNEKGEDEADTVGCCSLRVEHMSF-----------NDENCALTLSFLGKDSMPYNNTVELAQYGDVGKQVYHNLQKFCAKKGKNEEVFHELSVTELNKHLSSLMPGLSAKVFRTFNASFTLEKELPGPSGQELDPQGKMEVAPKVVLYNDANRKVAILCNHQRTAPKSFDTTLDKMNAQLGQLKDQLKDLKQMQKLISTGKASSIKLKKEKPASDKEEDAL-----------------------------------AKKAQAHLFQRTPSADQVTKKIENWKKKIKALSLRLQDKTDNKEVALGTSKLNYMDPRITVAWCKRNEVPISAVFSKTLREKFVWAMDVNPDWKF 743
BLAST of EWM27641.1 vs. NCBI_GenBank
Match: gi|675211919|ref|XP_008914844.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675211921|ref|XP_008914845.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|675211923|ref|XP_008914846.1| hypothetical protein PPTG_18456 [Phytophthora parasitica INRA-310] >gi|675211925|ref|XP_008914847.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568084999|gb|ETM99917.1| hypothetical protein PPTG_18456 [Phytophthora parasitica INRA-310] >gi|568085000|gb|ETM99918.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568085001|gb|ETM99919.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568085002|gb|ETM99920.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 347/662 (52.42%), Postives = 439/662 (66.31%), Query Frame = 0 Query: 66 KTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELP-----TVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRF 722 K + SK+ R++ A+KAF+WW+ E LP+GIQWR LEHNG+ FPP Y PH V +LY+GKE+EL EEVA+F+A++P DGPQLG+P T KIF KNFF FK++L + E +K F+ CDFS I AHLE + KK T EEK K +E G+A VDG +EKVGNF +EPPGLFRGRG HP G +KER +PE++ VN+G RVP C +PGHAW +V H + V+WLA W ENV+ G+KYV AASSSFKGKSD+ KY+KA RLK+CI +IRRDY L K D KQ +TAMW+ID LALRVG EKGEDEADTVGCCSLR+EH+ F + + L FLGKDSM + T++ A YG+ GKQV+ NL+ F K ++VF L+ + LN HL SLMPGLSAKVFRT+NAS TL+ ELP ++ M V KVV YNDANRKVAILCNHQRT K+ +T L + +L LKDQ K+L ++L+ +GK + I+ +K+ +DK A+ AK AHLF R P+ +QV +KIE W++KI L L +++K +NKEVALGTSK+NYMDPRI+VAWCKR EVPI +F+KTLR+KFVWAM V P W+F Sbjct: 133 KLKVHSKSERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPPPYKPHHVPLLYNGKEIELTPSQEEVASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGKQHE----VKTFEGCDFSRIAAHLEKLREEKKNMTKEEKLPEKEKREMEVFTNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPEDVTVNVGISDRVPICNVPGHAWKQVIHRDTVSWLAYWNENVMGGIKYVFFAASSSFKGKSDLAKYEKARRLKKCIDKIRRDYTKGL-KAKDMFTKQRSTAMWVIDVLALRVGNEKGEDEADTVGCCSLRVEHMSF-----------NDENCALTLSFLGKDSMPYNNTVELAQYGDVGKQVYHNLQKFCAKKGKNEEVFHELSVTELNKHLSSLMPGLSAKVFRTFNASFTLEKELPGPSGQELDPQGKMEVAPKVVLYNDANRKVAILCNHQRTAPKSFDTTLDKMNAQLGQLKDQLKDLKQMQKLISTGKASSIKLKKEKPASDKEEDAL-----------------------------------AKKAQAHLFQRTPSADQVTKKIENWKKKIKALSLRLQDKTDNKEVALGTSKLNYMDPRITVAWCKRNEVPISAVFSKTLREKFVWAMDVNPDWKF 743 The following BLAST results are available for this feature:
BLAST of EWM27641.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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