EWM27658.1, cds3037 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|585109928|gb|EWM27658.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1383.24 bits (3579), Expect = 0.000e+0 Identity = 683/683 (100.00%), Postives = 683/683 (100.00%), Query Frame = 0
Query: 1 MARPKKGYMDEEEGSTTGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAKIEPATSTSIALKPPTNHNQFYPHVHAHNHGLHSNAAFTSLTGYPSNGNGNVGPDMELSGQGSSMDLPLSLTRKKRSVGKSTYRRLVPGLDGDEMEEEIGCFEADKLEKEGDGINEEDEGCPFRSSTLTSRGRVSRPPRNKSTFPSHPSSPAGIGMRGEGFGSGIDTSHTTLEGIPQNGASARAVGTALRKQQKQRARRTAPLEQNGLRGSGSVFSSASSLTHSIWGALHTSSTDPTPSSLQSLPPRGLMNAEDSGCRPGAGVGPAGGLMVRIPMGEEHALDMEDNLFAAGELNGLFESLREGALVGAPTQTPTSVMHLYPDMDDFPDAMGAHVHGPEEDGKGEGKRERVGGANEALPGSDRPDYMLGVPGSLQSTGCCGSSTTSASSGVAGTTEGEEEEEEEALGEGEDAFSHLHELAGRGAPDWADAFEEALGALEGAEGVGEEGALGLHALQQSERLEPMGREASSNSLTDSSNTDTYLPSDESDGEQAGARPHLGSHLVRGLEDCGVENGPVGKRARLSYGYGQEGGEGFTSSLHTRGTSMAPSLVKEQAWKGEEGEKKRGEAAGGEEEEEDYGYFTTTEEDLDHFLVNILDGVTVTSTAGSATVGSVGVAPV 683
MARPKKGYMDEEEGSTTGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAKIEPATSTSIALKPPTNHNQFYPHVHAHNHGLHSNAAFTSLTGYPSNGNGNVGPDMELSGQGSSMDLPLSLTRKKRSVGKSTYRRLVPGLDGDEMEEEIGCFEADKLEKEGDGINEEDEGCPFRSSTLTSRGRVSRPPRNKSTFPSHPSSPAGIGMRGEGFGSGIDTSHTTLEGIPQNGASARAVGTALRKQQKQRARRTAPLEQNGLRGSGSVFSSASSLTHSIWGALHTSSTDPTPSSLQSLPPRGLMNAEDSGCRPGAGVGPAGGLMVRIPMGEEHALDMEDNLFAAGELNGLFESLREGALVGAPTQTPTSVMHLYPDMDDFPDAMGAHVHGPEEDGKGEGKRERVGGANEALPGSDRPDYMLGVPGSLQSTGCCGSSTTSASSGVAGTTEGEEEEEEEALGEGEDAFSHLHELAGRGAPDWADAFEEALGALEGAEGVGEEGALGLHALQQSERLEPMGREASSNSLTDSSNTDTYLPSDESDGEQAGARPHLGSHLVRGLEDCGVENGPVGKRARLSYGYGQEGGEGFTSSLHTRGTSMAPSLVKEQAWKGEEGEKKRGEAAGGEEEEEDYGYFTTTEEDLDHFLVNILDGVTVTSTAGSATVGSVGVAPV
Sbjct: 1 MARPKKGYMDEEEGSTTGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAKIEPATSTSIALKPPTNHNQFYPHVHAHNHGLHSNAAFTSLTGYPSNGNGNVGPDMELSGQGSSMDLPLSLTRKKRSVGKSTYRRLVPGLDGDEMEEEIGCFEADKLEKEGDGINEEDEGCPFRSSTLTSRGRVSRPPRNKSTFPSHPSSPAGIGMRGEGFGSGIDTSHTTLEGIPQNGASARAVGTALRKQQKQRARRTAPLEQNGLRGSGSVFSSASSLTHSIWGALHTSSTDPTPSSLQSLPPRGLMNAEDSGCRPGAGVGPAGGLMVRIPMGEEHALDMEDNLFAAGELNGLFESLREGALVGAPTQTPTSVMHLYPDMDDFPDAMGAHVHGPEEDGKGEGKRERVGGANEALPGSDRPDYMLGVPGSLQSTGCCGSSTTSASSGVAGTTEGEEEEEEEALGEGEDAFSHLHELAGRGAPDWADAFEEALGALEGAEGVGEEGALGLHALQQSERLEPMGREASSNSLTDSSNTDTYLPSDESDGEQAGARPHLGSHLVRGLEDCGVENGPVGKRARLSYGYGQEGGEGFTSSLHTRGTSMAPSLVKEQAWKGEEGEKKRGEAAGGEEEEEDYGYFTTTEEDLDHFLVNILDGVTVTSTAGSATVGSVGVAPV 683
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|950893384|ref|XP_014528164.1| (hypothetical protein JH06_3996 [Blastocystis sp. subtype 4] >gi|902862779|gb|KNB44725.1| hypothetical protein JH06_3996 [Blastocystis sp. subtype 4]) HSP 1 Score: 83.9593 bits (206), Expect = 2.133e-14 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
Query: 16 TTGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAKIEPA 71
GRW+ EH LF GL+K+GK WK IA EIP+RTVVQ+RTHAQKYF KL+ P+
Sbjct: 62 VVGRWSATEHELFLQGLQKFGKDWKAIANEIPTRTVVQVRTHAQKYFQKLSNAAPS 117
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|1173946604|gb|OQR95117.1| (hypothetical protein ACHHYP_00385 [Achlya hypogyna]) HSP 1 Score: 81.2629 bits (199), Expect = 3.738e-14 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query: 6 KGYMDEEEGSTT--GRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAK 67
K MD+E ST GRW EEH LF +GLR YGK WK++A+ +P+R+ VQIRTHAQK+F ++++
Sbjct: 43 KAEMDDESPSTKRGGRWLAEEHQLFLEGLRAYGKNWKKVAQVVPTRSTVQIRTHAQKFFKRMSQ 106
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|1210516787|dbj|GAX24276.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 86.2705 bits (212), Expect = 4.282e-14 Identity = 39/54 (72.22%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 14 GSTTGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAK 67
G TGRWT EEH LF GL ++GK WK+IA I SRTVVQIRTHAQKYF KLAK
Sbjct: 95 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 148
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|1210512502|dbj|GAX28359.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 86.2705 bits (212), Expect = 4.849e-14 Identity = 39/54 (72.22%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 14 GSTTGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAK 67
G TGRWT EEH LF GL ++GK WK+IA I SRTVVQIRTHAQKYF KLAK
Sbjct: 96 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 149
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|219128113|ref|XP_002184266.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404497|gb|EEC44444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.8853 bits (211), Expect = 5.659e-14 Identity = 39/54 (72.22%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 14 GSTTGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAK 67
G TGRWT EEH LF GL ++GK WK+IA I SRTVVQIRTHAQKYF KLAK
Sbjct: 114 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 167
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|397610547|gb|EJK60893.1| (hypothetical protein THAOC_18691 [Thalassiosira oceanica]) HSP 1 Score: 84.7297 bits (208), Expect = 7.696e-14 Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 0
Query: 17 TGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAK 67
TGRWT EEH LF GL ++GK WK+IA I SRTVVQIRTHAQKYF KLAK
Sbjct: 310 TGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAK 360
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|1072235817|gb|OEU20545.1| (hypothetical protein FRACYDRAFT_165241, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 75.0998 bits (183), Expect = 1.864e-13 Identity = 36/49 (73.47%), Postives = 39/49 (79.59%), Query Frame = 0
Query: 19 RWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAK 67
RWT+EEH LF GL +GK WK+IA I SRTVVQIRTHAQKYF KLAK
Sbjct: 1 RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAK 49
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|585113115|gb|EWM30452.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 84.3445 bits (207), Expect = 2.772e-13 Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0
Query: 17 TGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAK 67
TGRWT EEH LF GL +GK WK+IA+ I +RTVVQIRTHAQKYF KLAK
Sbjct: 100 TGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAK 150
BLAST of EWM27658.1 vs. NCBI_GenBank
Match: gi|224007633|ref|XP_002292776.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971638|gb|EED89972.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 84.7297 bits (208), Expect = 2.845e-13 Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 0
Query: 17 TGRWTTEEHALFEDGLRKYGKQWKRIAEEIPSRTVVQIRTHAQKYFLKLAK 67
TGRWT EEH LF GL ++GK WK+IA I SRTVVQIRTHAQKYF KLAK
Sbjct: 418 TGRWTAEEHRLFLQGLEQHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAK 468 The following BLAST results are available for this feature:
BLAST of EWM27658.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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