EWM27651.1, cds3035 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|585109921|gb|EWM27651.1| (3-methyladenine dna glycosylase [Nannochloropsis gaditana]) HSP 1 Score: 861.292 bits (2224), Expect = 0.000e+0 Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0
Query: 1 MPVDSFLAVERDCVLQYSTTRTVYPTGTGAVLHFFLSALLLLHVTLVTTSCGKMNNRKMPPIATRAAKAIGASTFISATSARRRRLVSVSAKIDDENGSALMETSTEASSSRPSNPLESSIHVTTSRTPTRRLSENFSSSINSSVETVRAMLRNVSQRVESAVAFEAHHLPVVKCTDTAHHRVSTPKSFEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHACSCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVSKPWPRAQDKKMRKRKKIS 420
MPVDSFLAVERDCVLQYSTTRTVYPTGTGAVLHFFLSALLLLHVTLVTTSCGKMNNRKMPPIATRAAKAIGASTFISATSARRRRLVSVSAKIDDENGSALMETSTEASSSRPSNPLESSIHVTTSRTPTRRLSENFSSSINSSVETVRAMLRNVSQRVESAVAFEAHHLPVVKCTDTAHHRVSTPKSFEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHACSCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVSKPWPRAQDKKMRKRKKIS
Sbjct: 1 MPVDSFLAVERDCVLQYSTTRTVYPTGTGAVLHFFLSALLLLHVTLVTTSCGKMNNRKMPPIATRAAKAIGASTFISATSARRRRLVSVSAKIDDENGSALMETSTEASSSRPSNPLESSIHVTTSRTPTRRLSENFSSSINSSVETVRAMLRNVSQRVESAVAFEAHHLPVVKCTDTAHHRVSTPKSFEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHACSCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVSKPWPRAQDKKMRKRKKIS 420
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|908493627|ref|XP_013096279.1| (PREDICTED: probable DNA-3-methyladenine glycosylase [Biomphalaria glabrata] >gi|908493630|ref|XP_013096280.1| PREDICTED: probable DNA-3-methyladenine glycosylase [Biomphalaria glabrata] >gi|908493633|ref|XP_013096281.1| PREDICTED: probable DNA-3-methyladenine glycosylase [Biomphalaria glabrata]) HSP 1 Score: 173.711 bits (439), Expect = 6.058e-48 Identity = 101/224 (45.09%), Postives = 130/224 (58.04%), Query Frame = 0
Query: 189 FEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHAC-SCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVD-HLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVSKPWPRAQD 410
F + I A LLG LVR + G R+SGKIVE EAYLG DK AH+Y GKRT R E MF A G AY+Y+++ CLN+ S +G+ VLIRALEP EG IM + R KN TN S +E + EL GP +LC ALA+ + + +L L+LE+GE +P ++V SPRI I YA W+E PLRF +LGN VSK +A++
Sbjct: 51 FNVNCEILAHLLLGQNLVRCIG-GQRVSGKIVETEAYLGLEDKAAHTYNGKRTERNEAMFMAPGTAYVYNIYGMYCCLNI--SSQGEGCAVLIRALEPQEGLEIM-------KTHRSKNSTN------------STKELKVKELTNGPSKLCQALAISKNDFNKCNLTNSELLWLEQGETIPDEKIVCSPRINIGYAEEWQEKPLRFYILGNSCVSKRDKKAEE 252
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|497761851|ref|WP_010076035.1| (DNA-3-methyladenine glycosylase [Clostridium cellulovorans] >gi|302577089|gb|ADL51101.1| DNA-3-methyladenine glycosylase [Clostridium cellulovorans 743B]) HSP 1 Score: 166.777 bits (421), Expect = 7.009e-46 Identity = 91/220 (41.36%), Postives = 125/220 (56.82%), Query Frame = 0
Query: 185 TPKSFEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHAC-SCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVSK 403
T + ++ D+LI A LLG LV+ T L GKIVEVEAY GP DKGAHSY +RT R E MF A G +Y+Y ++ +CLN + KEG P VLIRA+EP+E ++M +NR A + +E + L GPG+LC AL + + DL+ G ++F+ GE + Q++ PRIGI+YA +K+ P RF V N+ VSK
Sbjct: 6 TREFYDRDSLIVAEELLGKYLVKK-DNNTELIGKIVEVEAYRGPEDKGAHSYNNRRTSRTEVMFGAPGYSYVYLIYGMYNCLNTVCEKEGIPQAVLIRAIEPLEAVNVMFKNRYGREA-------------------ENPKESEIKNLTNGPGKLCKALNITKEHNKLDLL-GEEIFITEGEIIKKEQIIRKPRIGIDYAEEYKDKPWRFYVENNKFVSK 204
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|851136154|ref|WP_048081485.1| (MULTISPECIES: DNA-3-methyladenine glycosylase [Methanobacterium]) HSP 1 Score: 163.31 bits (412), Expect = 1.503e-44 Identity = 86/226 (38.05%), Postives = 126/226 (55.75%), Query Frame = 0
Query: 189 FEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHACS-CLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVSKPWPRAQDKKM 413
+E + LI AR LLG LV + P G G+IVE EAY+GP DKGAHSYGG+ TPR+ P++ GG AYIY +H + C+NV+ KEG P VLIR LEPV+G +M + R D++ + + K L L GP +LC A+ ++ ++G DL G + + +++ +PR+ I+YA +++ RF + GN +SK + KKM
Sbjct: 8 YERNTLIVARKLLGCVLVHITPEGI-TKGRIVETEAYMGPEDKGAHSYGGRHTPRMNPLYKTGGFAYIYQLHGYNYCINVVTQKEGVPQAVLIRGLEPVKGLELMAKRR-------------------KIDISDNRKSK-LKNLTNGPSKLCQAMKINTSLNGIDLCGDEIFITNQTDLRSNEEIIAAPRVNIDYAEEYRDKLWRFLIKGNAFISKGYKGRNFKKM 212
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|1084850559|gb|OGQ81693.1| (hypothetical protein A2289_03325 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]) HSP 1 Score: 160.999 bits (406), Expect = 8.465e-44 Identity = 96/222 (43.24%), Postives = 122/222 (54.95%), Query Frame = 0
Query: 185 TPKSFEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHAC-SCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLER--GEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVSK 403
T + + D + AR LLG RLVRV G RLSG IVE EAYLG D+ AH+ G+RTPR E M+ GG AY+Y + C N++ S+ DP VLIRAL+P EG M+Q R AR K+ ELC+GP RLC AL +D + G DLV G LF+ER + + +V RIG++YAG W LR+ + GN HVSK
Sbjct: 6 TRRFYRQDPVSVARGLLGMRLVRVTS-GRRLSGVIVETEAYLGTKDQAAHTCQGRRTPRNESMWGDGGHAYVYFTYGMHHCFNIVTSRSEDPCAVLIRALQPDEGREEMVQRRKAAR----KD----------------------TELCSGPARLCQALDIDRRLDGVDLVDGDALFVERIHARSLMSPVIVARRRIGVDYAGAWARRLLRYYLRGNPHVSK 200
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|503389477|ref|WP_013624138.1| (DNA-3-methyladenine glycosylase [Syntrophobotulus glycolicus] >gi|324964488|gb|ADY55267.1| 3-methyladenine DNA glycosylase [Syntrophobotulus glycolicus DSM 8271]) HSP 1 Score: 160.229 bits (404), Expect = 1.593e-43 Identity = 91/217 (41.94%), Postives = 132/217 (60.83%), Query Frame = 0
Query: 189 FEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAY---IYHMHACSCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVS 402
++ D+LI A+ LLG LVR G R++ KIVE EAY+G D+ AHSYGGKRTPR+E M+ G +Y IY MH C N++ + G+P VL+RA EP++G IM Q+R NKT A + ++ + L GPG+LC AL +D ++G DL G++L++E GE+ ++V + R+G++YAG K+ P RF + GNR+VS
Sbjct: 9 YDRDSLIVAKELLGRVLVRE-AGGQRIAAKIVEAEAYMGIDDQAAHSYGGKRTPRVEVMYGESGFSYVFMIYGMH--YCFNIVTREAGNPQAVLLRAAEPLDGLDIMAQSRF--------NKT-------YAQLTKNQ----IKGLTDGPGKLCKALRIDKNLNGEDLC-GSKLYVEEGEN-EKFRIVSAKRVGVDYAGEAKDYPWRFYIEGNRYVS 201
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|1120150204|ref|WP_073020298.1| (3-methyladenine DNA glycosylase [Clostridium intestinale] >gi|1110193641|emb|SHI21857.1| DNA-3-methyladenine glycosylase [Clostridium intestinale DSM 6191]) HSP 1 Score: 156.762 bits (395), Expect = 4.502e-42 Identity = 84/217 (38.71%), Postives = 127/217 (58.53%), Query Frame = 0
Query: 189 FEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHAC-SCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVD-HLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVSK 403
F D LI A+ LLG +VR + G RLSGKIVE E Y+G DK +H+YGGK+TPR+EP++ G++Y++ ++ C NVI+ ++G P G+LIRA+EP++G + QNR R + A E + L GP +LC AL ++ + + DLV +L++E G+ + +S +V + R+GI+YA + P RF V N +VSK
Sbjct: 8 FARDTLIVAKELLGKVIVREID-GVRLSGKIVETEGYIGSIDKASHAYGGKKTPRVEPLYGEPGISYVFSIYGMYECFNVISKEKGSPEGILIRAVEPIDGLEKIAQNRFRK---------------SYDTLTAKE----IKNLTNGPSKLCIALDINKKVHNFMDLVKSKELYIEDGDIINSSDIVETTRVGIDYAEEAVDFPWRFYVKNNIYVSK 204
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|1098216575|emb|SFG55141.1| (DNA-3-methyladenine glycosylase [Desulfotomaculum arcticum]) HSP 1 Score: 156.377 bits (394), Expect = 4.848e-42 Identity = 89/217 (41.01%), Postives = 131/217 (60.37%), Query Frame = 0
Query: 187 KSFEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHAC-SCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVS 402
K + D+LI A+ LLG LVR + G ++S KIVE EAY+G DK AHSYGG+RT R+E M+ G AY++ ++ C NV+ +E +P VLIRA+EP+EG IM QNR GK+ + ++ S+ + L GPG+LC AL++D ++G D V G++L++E GE+ S +V + RIG++YA K+ RF + N +VS
Sbjct: 7 KFYNRDSLIVAKELLGKLLVREID-GQKISAKIVETEAYMGFRDKAAHSYGGRRTQRVEVMYGGPGFAYVFFVYGMHYCFNVVTREEENPQAVLIRAVEPIEGLDIMAQNRF------GKS---------YSKLSKSQ----MKNLTNGPGKLCRALSIDKNLNGED-VCGSKLYVEEGENEKFS-IVSAKRIGVDYAEEAKDYLWRFYIKDNTYVS 201
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|291229341|ref|XP_002734634.1| (PREDICTED: DNA-3-methyladenine glycosylase-like [Saccoglossus kowalevskii]) HSP 1 Score: 157.532 bits (397), Expect = 7.485e-42 Identity = 88/216 (40.74%), Postives = 122/216 (56.48%), Query Frame = 0
Query: 189 FEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHAC-SCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHL-MSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVS 402
++ + AR LLG LVR G RL+GKIVE EAYLG DKGAHSYGGK+T + MF G Y+Y+++ SC+N+ S +G+ VLIRAL+PV G + M +R + R K P ELC GP +LC A+ +D + DL ++++E+G V AS+++ PRIGI+YA W PLRF + GN++VS
Sbjct: 52 YKKSCVDLARDLLGKILVRKTEDGERLAGKIVETEAYLGGEDKGAHSYGGKKTEKNAAMFMDPGTCYVYYVYGLYSCVNI--SSQGEGAAVLIRALDPVNGLAAMHISRSQKRKKESK------PFKD-------------HELCNGPSKLCQAMRIDKKNFNCKDLTTIDEMWVEKGVDVDASEIIECPRIGIDYAKEWATKPLRFYIKGNKNVS 246
BLAST of EWM27651.1 vs. NCBI_GenBank
Match: gi|1160381826|ref|WP_079426545.1| (3-methyladenine DNA glycosylase [Clostridium oryzae] >gi|1159625247|gb|OPJ59395.1| putative 3-methyladenine DNA glycosylase [Clostridium oryzae]) HSP 1 Score: 155.221 bits (391), Expect = 1.678e-41 Identity = 86/215 (40.00%), Postives = 124/215 (57.67%), Query Frame = 0
Query: 189 FEADALITARWLLGARLVRVLPCGTRLSGKIVEVEAYLGPHDKGAHSYGGKRTPRLEPMFAAGGVAYIYHMHAC-SCLNVIASKEGDPVGVLIRALEPVEGTSIMLQNRLRARALRGKNKTNRGPIPHVADMNASEREKLLAELCAGPGRLCHALAVDHLMSGSDLVGGAQLFLERGEHVPASQLVVSPRIGIEYAGLWKEAPLRFSVLGNRHVS 402
+ D +I A+ LLG LV + R+S KIVE EAY+G +DK AHSYGG+RT R+E M+ G +Y++ ++ +C NV+ +EG+P VLIRA EPVEG IM +NR + N+ + I L GPG+LC AL +D ++G DL G +L+LE GE+ ++ S R+GI+YA K+ P RF + N++VS
Sbjct: 9 YNRDTVIVAKELLGKVLVHEVNS-QRISAKIVEAEAYMGVNDKAAHSYGGRRTARVEAMYGKPGTSYVFIIYGMYNCFNVVTREEGNPQAVLIRAAEPVEGLDIMAENRFKETY----NQLTKSQIKG---------------LTNGPGKLCGALLIDRSLNGEDLCGN-KLYLEEGEN-EKFNIISSKRVGIDYAEEAKDYPWRFYIENNKYVS 201 The following BLAST results are available for this feature:
BLAST of EWM27651.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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