EWM27636.1, cds3034 (CDS) Nannochloropsis gaditana

Overview
NameEWM27636.1
Unique Namecds3034
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:554127..554672 -
Alignment locationCM002460.1:552926..553948 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27636.1
Productgtp-binding protein
Orig transcript idgnl|cribi|Naga_100059g21.8041.mrna
GenePDE318
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:554127..554672 -
CM002460.1supercontigCM002460.1:552926..553948 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006073GTP_binding_domain
Homology
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|585109906|gb|EWM27636.1| (gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 1055.82 bits (2729), Expect = 0.000e+0
Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query:    1 MEHGRHNSRSLLCRLMPCPRHLAYRPIPGTALALAVMVSLLTLGSCTPAKVIITKRYASVWVSRASSLSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREVLSAIGLAEGPGGRVEGEGSGG 522
            MEHGRHNSRSLLCRLMPCPRHLAYRPIPGTALALAVMVSLLTLGSCTPAKVIITKRYASVWVSRASSLSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREVLSAIGLAEGPGGRVEGEGSGG
Sbjct:    1 MEHGRHNSRSLLCRLMPCPRHLAYRPIPGTALALAVMVSLLTLGSCTPAKVIITKRYASVWVSRASSLSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREVLSAIGLAEGPGGRVEGEGSGG 522          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|299470109|emb|CBN78138.1| (PDE318, predicted plastid-localised Nog1-like GTPase [Ectocarpus siliculosus])

HSP 1 Score: 389.423 bits (999), Expect = 2.912e-127
Identity = 199/356 (55.90%), Postives = 258/356 (72.47%), Query Frame = 0
Query:  149 RPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEK-IKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREVLS 503
            R R T TGGLK+LP+  P+ ELL+ A R SK  KV ++  IKN R R+RK  A ++D L K+ SKPLRD+++ Y ++L +LHPFEATLADLTVRAR K G ++L  VL  VN+ RK  LE  K  A   K    K E ++  +AG+  +E   L    V+ DL ++QK+LR +PIVQL +PTVVLVGAPNVGKSSIVRA+STGTPEVN+YPFTTRGM LGH+ +      + Q+MDTPGVL+RPD ERNEME+LTLASM HLPTAV+FV+DL+G+SG LSS+ENQ+Q+R+ LR RFP+RPW+DV+SKADLP  + + A    P G L +S  DGTG+ E++ R+ EM   +  +L+
Sbjct:  126 RKRLTSTGGLKSLPIVTPSIELLSHASRRSK--KVSQDMLIKNARNRSRKWVAERMDMLGKATSKPLRDIIRQYKHQLPILHPFEATLADLTVRAREKTGERTLQSVLDDVNDFRKVALEISKSAAREGKLGEKKSEIMQTMDAGYSRMEDHFLTNGSVLEDLTEIQKSLRSLPIVQLHLPTVVLVGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHM-FHPETNARYQIMDTPGVLSRPDGERNEMEALTLASMQHLPTAVIFVMDLSGHSGHLSSLENQMQVRHELRRRFPRRPWLDVVSKADLPRLELEKAKEALPEGYLDLSTLDGTGVDELKTRLFEMYEIIERILA 478          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|551652570|ref|XP_005829064.1| (hypothetical protein GUITHDRAFT_46932, partial [Guillardia theta CCMP2712] >gi|428173180|gb|EKX42084.1| hypothetical protein GUITHDRAFT_46932, partial [Guillardia theta CCMP2712])

HSP 1 Score: 296.975 bits (759), Expect = 9.717e-94
Identity = 158/298 (53.02%), Postives = 206/298 (69.13%), Query Frame = 0
Query:  162 PVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQC-QVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLP 458
            P   PA+EL+NRAV  +   K D   +KNQRQRARK  A +L  L+K ++KP  ++L+ Y+  L  L PFE  +ADLTV++R   G+ SLP+ LK + ELRK  +E  K    AAK A S++  +E  +     +E L      V+  L+++ + LR +P+V   + TVVLVG+PNVGKSSIVR+ISTGTPEVNNYPFTTRGMTLGH+  +D  E  C QVMDTPG+L R D+ERNEME LTLASM HL + ++FVLDLTG SG  SSI +Q+ +R+ LR RFP R W+DV+SKAD+P
Sbjct:   14 PRVFPADELVNRAVNRALSHKEDT-TVKNQRQRARKYAAEQLAILSKELTKPTGEILEGYEKILKNLSPFEKVVADLTVKSRELAGYGSLPDTLKGLQELRKDTMEVCKAGTKAAKEAVSRKLTLEEVDVAIASIEELWERDGWVLDLLLNMGQELRSVPMVDPELDTVVLVGSPNVGKSSIVRSISTGTPEVNNYPFTTRGMTLGHI-LDDLGEQICQQVMDTPGLLPRSDQERNEMEKLTLASMEHLNSVIIFVLDLTGESGIKSSISDQLSVRDELRIRFPDREWIDVVSKADIP 309          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|1026770589|gb|OAE30388.1| (hypothetical protein AXG93_3612s1110 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 273.092 bits (697), Expect = 7.169e-82
Identity = 161/382 (42.15%), Postives = 227/382 (59.42%), Query Frame = 0
Query:  130 NQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKAD----------LPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREV 501
             QTAEV   S +++ +++   R    G  + LP+  PANE+L  A+R +K +K  +  I N  +R R  GA +LD L K ++ PLR  L+ +  +   LH +E  L +LT+      G     EVL  V+ LRK +L+ GK +A+    +T+K EA E  E GF  +E L  +    V DL +  K LR +P+V++  PT+ LVGAPNVGKSS+VR +S+G PEV NYPFTTRG+++GH + E     + QV DTPG+L RPD+ERN +E LT+A++ HLPT+V++V DLTG  G  +++ NQ  I N +R RF  RPW+DV+SKAD          L +D         P GAL VSV  G G+ E+  RV  +LL+   V
Sbjct:  101 QQTAEV---SSASAQVEQMASREQKLGAFQQLPMVSPANEILVSALRRAKMVKATK-GIVNAAKRERNKGAKQLDALIKELTTPLRLYLQKFP-QRRHLHAYERALLELTL------GDGMYEEVLARVDLLRKKILDLGKNYASLCAKSTTKAEAEERLEEGFSRLEELFKKQGKAVDDLKEHAKTLRAMPVVRIRTPTLCLVGAPNVGKSSLVRILSSGKPEVCNYPFTTRGISMGHFEIES---RRFQVTDTPGLLKRPDDERNNIEKLTIAALAHLPTSVLYVHDLTGECG--TTVPNQFAIYNEMRERFADRPWLDVVSKADLLPPPPTDGSLEVDDLHSYALSGPKGALWVSVYSGQGIDELVRRVHSLLLEAHPV 466          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|168038141|ref|XP_001771560.1| (predicted protein [Physcomitrella patens] >gi|162677116|gb|EDQ63590.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 266.544 bits (680), Expect = 3.205e-81
Identity = 156/353 (44.19%), Postives = 218/353 (61.76%), Query Frame = 0
Query:  145 LKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEV-LKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADL--------PMDQEDPAVARAPAGALKVSVADGTGLAEVE 488
            LK+   +R   G  + LPV  P  E+L  A+R +K +K   + I+N  +R R  GA +LD LTK ++ PL+  +K +  E   LHP+E +L +LT+      G  +  EV L+ V+ LRK +L+ GK  A+    +TSK+EA E  E G  ++E +       V DL ++ K LR +P+V    PTV LVGAPNVGKSS+VR +S+G PEV NYPFTTRG+++GH  + D V  + QV DTPG+LNRPD+ERN +E LTLA++ HLPTAV++V DLTG  G  +++ +Q  I   ++  FP+RPW+DV+SKADL        P  + +  V   PAGAL+VS     GL EV 
Sbjct:    9 LKQIAVKRRDIGAFQQLPVVSPGIEILGTALRRTKMIK-PTKGIQNAAKRERNRGAKQLDALTKELTIPLKGYVKNFP-ECQQLHPYEQSLLELTL------GPGTYEEVTLRRVDLLRKRILDYGKNCASLCAKSTSKREAEERLEEGITKLEDMFKRHGKAVDDLKEIAKVLRAMPVVHPRTPTVCLVGAPNVGKSSLVRILSSGKPEVCNYPFTTRGISMGHF-FVDSV--RYQVTDTPGILNRPDDERNNIEKLTLAALAHLPTAVLYVHDLTGECG--TTVSDQFSIYKHIKGLFPERPWLDVVSKADLLETPPAHIPALEAEAYVLVGPAGALRVSTQTEHGLDEVH 348          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|769817316|ref|XP_006838465.2| (nucleolar GTP-binding protein 1 [Amborella trichopoda])

HSP 1 Score: 264.618 bits (675), Expect = 2.003e-79
Identity = 155/357 (43.42%), Postives = 222/357 (62.18%), Query Frame = 0
Query:  155 TGGLKNLPVTPPANELLNRAVRLSKWLKVDEEK-IKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKAD-LPMD-------QEDPAVAR----APAGALKVSVADGTGLAEVEARVKEMLL 496
            TG  + LP+  P+N+LL  A++ +K  +V   K I N  +R R  GA +LD L K ++ PLR  +K + Y+ + LHP+E +L +LT+      G  +  EVL  V+ +RK V+  GK  A+    ++SK+EA +    G R +E +     + V DL++V KALR +P+V   +PT+ LVG+PNVGKSS+VR +STG PEV NYPFTTRG+ +GH  L YE     Q QV DTPG+L RP++ERN +E LTLA ++HLPTAV+FV DL+G  G  SS  +Q +    +R RFP + W+DV+SK D LP D        ED  + R     P GA+ VSV  G G+ +++++V ++LL
Sbjct:   82 TGAFQKLPMVLPSNDLLLSALKKAK--RVSPTKGIANIAKRERNRGARQLDQLMKELAVPLRGYVKMFPYKRS-LHPYEQSLIELTL------GEGTYEEVLGRVDTIRKKVVSVGKEQASLCAKSSSKREAEDRLGEGLRRIEEIFQREGNAVDDLVNVAKALRVMPVVNPEIPTLCLVGSPNVGKSSLVRVLSTGRPEVCNYPFTTRGILMGHIVLNYE-----QFQVTDTPGLLKRPEDERNNLEKLTLAVLMHLPTAVLFVHDLSGECG--SSPSDQFETYKEIRERFPDQLWLDVVSKCDLLPYDITSEKGNIEDDELERYKRAGPEGAIHVSVMSGIGIDKLKSKVHDLLL 422          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|548840971|gb|ERN01034.1| (hypothetical protein AMTR_s00002p00146270 [Amborella trichopoda])

HSP 1 Score: 264.618 bits (675), Expect = 2.003e-79
Identity = 155/357 (43.42%), Postives = 222/357 (62.18%), Query Frame = 0
Query:  155 TGGLKNLPVTPPANELLNRAVRLSKWLKVDEEK-IKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKAD-LPMD-------QEDPAVAR----APAGALKVSVADGTGLAEVEARVKEMLL 496
            TG  + LP+  P+N+LL  A++ +K  +V   K I N  +R R  GA +LD L K ++ PLR  +K + Y+ + LHP+E +L +LT+      G  +  EVL  V+ +RK V+  GK  A+    ++SK+EA +    G R +E +     + V DL++V KALR +P+V   +PT+ LVG+PNVGKSS+VR +STG PEV NYPFTTRG+ +GH  L YE     Q QV DTPG+L RP++ERN +E LTLA ++HLPTAV+FV DL+G  G  SS  +Q +    +R RFP + W+DV+SK D LP D        ED  + R     P GA+ VSV  G G+ +++++V ++LL
Sbjct:   82 TGAFQKLPMVLPSNDLLLSALKKAK--RVSPTKGIANIAKRERNRGARQLDQLMKELAVPLRGYVKMFPYKRS-LHPYEQSLIELTL------GEGTYEEVLGRVDTIRKKVVSVGKEQASLCAKSSSKREAEDRLGEGLRRIEEIFQREGNAVDDLVNVAKALRVMPVVNPEIPTLCLVGSPNVGKSSLVRVLSTGRPEVCNYPFTTRGILMGHIVLNYE-----QFQVTDTPGLLKRPEDERNNLEKLTLAVLMHLPTAVLFVHDLSGECG--SSPSDQFETYKEIRERFPDQLWLDVVSKCDLLPYDITSEKGNIEDDELERYKRAGPEGAIHVSVMSGIGIDKLKSKVHDLLL 422          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|922500948|ref|XP_013588131.1| (PREDICTED: nucleolar GTP-binding protein 1-like [Brassica oleracea var. oleracea])

HSP 1 Score: 261.536 bits (667), Expect = 4.080e-78
Identity = 171/448 (38.17%), Postives = 249/448 (55.58%), Query Frame = 0
Query:   68 LSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIR--ARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADL-------PMDQEDPAVARA---------PAGALKVSVADGTGLAEVEARVKEML 495
            L++PP+L L  F+ S  +S  + PP          P++R   R  Q   +P V  + L       +  E  P+SP     K   P +   G  + LP+  P+ +L + A+R SK ++   + I N  +R R  GA +LD L K ++ PL+  ++++      LHP+E +L +LT+      G  +  EVL  V+ LRK VL  GK HA+    A SK+EA +    G  ++E +  +    V DL+ + K LR +P+V L MPT+ LVGAPNVGKSS+VR +STG PE+ NYPFTTRG+ +GH  L Y+ +     QV DTPG+L R DE+RN +E LTLA + HLPTAV++V DLTG  G  +S  +Q +I   ++ RF    W+DV+SK DL          +ED +   A         P G++ VSV    GL+E+++RVKE+L
Sbjct:   16 LASPPQLYLQAFVFSTASSTTKSPPTFWS------PTLRRQCRNLQTAVSPVVTSSYLPTSYITQKQIE-TPTSPE----KEGPPMQESLGAFQKLPMVMPSIDLYSSALRKSKRVQ-PTKGIANIAKRERNRGAKQLDALMKELALPLKGYMESFPRR-RFLHPYERSLIELTL------GDGNYEEVLGKVDALRKKVLSVGKEHASLCAKALSKREAEDRLSEGVEKLELVFQQQGIAVDDLLSIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHVILNYQRF-----QVTDTPGLLRRCDEDRNNLEKLTLAVLTHLPTAVLYVHDLTGECG--TSTSDQFRIYKEIKERFEDYLWIDVVSKCDLLGGGSPVIYAKEDASNDEAEIIRYRETGPDGSIHVSVKTEQGLSELKSRVKEVL 437          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|1079428450|ref|XP_018508895.1| (PREDICTED: nucleolar GTP-binding protein 1 [Brassica rapa])

HSP 1 Score: 259.225 bits (661), Expect = 3.461e-77
Identity = 167/446 (37.44%), Postives = 247/446 (55.38%), Query Frame = 0
Query:   68 LSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADL------------PMDQEDPAVAR----APAGALKVSVADGTGLAEVEARVKEML 495
            L++PP+L LP FI S  +S  + P    P  +      + R  Q   +P V  + L       +  E       ASP K   P +   G  + LP+  P+ +L + A+R SK ++   + I N  +R R  GA +LD L K ++ PL+  ++++     +LHP+E +L +LT+      G  +  EVL  V+ LRK V   GK HA+    A SK+EA +    G  ++E +  +    V +L+ + K LR +P+V L MPT+ LVGAPNVGKSS+VR +STG PE+ NYPFTTRG+ +GH  L Y+ +     QV DTPG+L R DE+RN +E LTLA + HLPTAV++V DLTG  G  +S  +Q +I   ++ RF    W+DV+SK DL             +  ++  + R     P G++ VSV    GL+E+++RVKE+L
Sbjct:   16 LASPPQLYLPAFIFSTASSTPKSPTFWSPTLR------QCRNLQTAVSPVVTSSYLPTSYITQKQIET-----PASPEKEGPPMQESLGAFQKLPMVMPSIDLYSSALRKSKRVQ-PTKGIANIAKRERNRGAKQLDALMKELALPLKGYMESFPRR-RLLHPYERSLIELTL------GDGNYEEVLGKVDALRKKVQSVGKEHASLCAKALSKREAEDRLSEGVEKLELVFQQQGIAVDELLSIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHVILNYQRF-----QVTDTPGLLRRCDEDRNNLEKLTLAVLTHLPTAVLYVHDLTGECG--TSPSDQFRIYKEIKERFEDYLWIDVVSKCDLLGGGSPVIYAKEDISNDEAEIIRYRETGPDGSIHVSVKTEQGLSELKSRVKEVL 435          
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|674965723|emb|CDX67966.1| (BnaA07g20060D [Brassica napus])

HSP 1 Score: 256.914 bits (655), Expect = 6.235e-76
Identity = 171/469 (36.46%), Postives = 257/469 (54.80%), Query Frame = 0
Query:   58 ASVWVSRASSLSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADL--------------PMDQEDPAVAR--APAGALKVSVADGTGLAEVEARVKEML-LDVREVLSAIGL 507
            +S++ ++   L++ P+L L  FI+S  T+   K P     R            Q   +P V  + L       +  E  PSSP     K+  P +   G  + LP+  P+ +L + A+R SK ++  +  I N  +R R  GA +LD   K ++ PL+  ++++     +LHP+E +L +LT+      G     EVL  V+ LRK VL  GK HA+    A SK+EA +    G  ++E +  +    V DL+ + K LR +P+V L MPT+ LVGAPNVGKSS+VR +STG PE+ NYPFTTRG+ +GH  L Y+ +     QV DTPG+L R DE+RN +E LTLA + HLPTAV++V DLTG  G  +S  +Q +I   ++ RF    W+DV+SK DL                D+E+    R   P  A  VSV    GL+E++++VKE+L +++ ++ S +G+
Sbjct:   39 SSLFPNQWRLLASSPQLYLQSFILS--TASTTKSPTLRQYRNL----------QTSVSPVVTSSYLPTSYITQKQIE-TPSSPE----KKGPPVQESLGAFQKLPMVMPSIDLYSSALRKSKRVQPTKGCIANIAKRERNRGAKQLDAFMKELALPLKGYMESFPRR-RLLHPYERSLIELTL------GDGKYEEVLGKVDALRKKVLSVGKEHASLCAKALSKREAEDRLSEGVEKLELVFQQEGRAVDDLLSIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHVILNYQRF-----QVTDTPGLLRRCDEDRNNLEKLTLAVLTHLPTAVLYVHDLTGECG--TSPSDQFRIYKEIKERFKDYQWIDVVSKCDLLGGGSPVMYAKEDRSNDEEEIIKYRVTGPDEAFHVSVKTEQGLSELKSKVKEVLSIEMEKIKSRVGV 476          
The following BLAST results are available for this feature:
BLAST of EWM27636.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109906|gb|EWM27636.1|0.000e+0100.00gtp-binding protein [Nannochloropsis gaditana][more]
gi|299470109|emb|CBN78138.1|2.912e-12755.90PDE318, predicted plastid-localised Nog1-like GTPa... [more]
gi|551652570|ref|XP_005829064.1|9.717e-9453.02hypothetical protein GUITHDRAFT_46932, partial [Gu... [more]
gi|1026770589|gb|OAE30388.1|7.169e-8242.15hypothetical protein AXG93_3612s1110 [Marchantia p... [more]
gi|168038141|ref|XP_001771560.1|3.205e-8144.19predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|769817316|ref|XP_006838465.2|2.003e-7943.42nucleolar GTP-binding protein 1 [Amborella trichop... [more]
gi|548840971|gb|ERN01034.1|2.003e-7943.42hypothetical protein AMTR_s00002p00146270 [Amborel... [more]
gi|922500948|ref|XP_013588131.1|4.080e-7838.17PREDICTED: nucleolar GTP-binding protein 1-like [B... [more]
gi|1079428450|ref|XP_018508895.1|3.461e-7737.44PREDICTED: nucleolar GTP-binding protein 1 [Brassi... [more]
gi|674965723|emb|CDX67966.1|6.235e-7636.46BnaA07g20060D [Brassica napus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3042rna3042Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications