EWM27636.1, cds3034 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|585109906|gb|EWM27636.1| (gtp-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 1055.82 bits (2729), Expect = 0.000e+0 Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query: 1 MEHGRHNSRSLLCRLMPCPRHLAYRPIPGTALALAVMVSLLTLGSCTPAKVIITKRYASVWVSRASSLSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREVLSAIGLAEGPGGRVEGEGSGG 522
MEHGRHNSRSLLCRLMPCPRHLAYRPIPGTALALAVMVSLLTLGSCTPAKVIITKRYASVWVSRASSLSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREVLSAIGLAEGPGGRVEGEGSGG
Sbjct: 1 MEHGRHNSRSLLCRLMPCPRHLAYRPIPGTALALAVMVSLLTLGSCTPAKVIITKRYASVWVSRASSLSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREVLSAIGLAEGPGGRVEGEGSGG 522
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|299470109|emb|CBN78138.1| (PDE318, predicted plastid-localised Nog1-like GTPase [Ectocarpus siliculosus]) HSP 1 Score: 389.423 bits (999), Expect = 2.912e-127 Identity = 199/356 (55.90%), Postives = 258/356 (72.47%), Query Frame = 0
Query: 149 RPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEK-IKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREVLS 503
R R T TGGLK+LP+ P+ ELL+ A R SK KV ++ IKN R R+RK A ++D L K+ SKPLRD+++ Y ++L +LHPFEATLADLTVRAR K G ++L VL VN+ RK LE K A K K E ++ +AG+ +E L V+ DL ++QK+LR +PIVQL +PTVVLVGAPNVGKSSIVRA+STGTPEVN+YPFTTRGM LGH+ + + Q+MDTPGVL+RPD ERNEME+LTLASM HLPTAV+FV+DL+G+SG LSS+ENQ+Q+R+ LR RFP+RPW+DV+SKADLP + + A P G L +S DGTG+ E++ R+ EM + +L+
Sbjct: 126 RKRLTSTGGLKSLPIVTPSIELLSHASRRSK--KVSQDMLIKNARNRSRKWVAERMDMLGKATSKPLRDIIRQYKHQLPILHPFEATLADLTVRAREKTGERTLQSVLDDVNDFRKVALEISKSAAREGKLGEKKSEIMQTMDAGYSRMEDHFLTNGSVLEDLTEIQKSLRSLPIVQLHLPTVVLVGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHM-FHPETNARYQIMDTPGVLSRPDGERNEMEALTLASMQHLPTAVIFVMDLSGHSGHLSSLENQMQVRHELRRRFPRRPWLDVVSKADLPRLELEKAKEALPEGYLDLSTLDGTGVDELKTRLFEMYEIIERILA 478
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|551652570|ref|XP_005829064.1| (hypothetical protein GUITHDRAFT_46932, partial [Guillardia theta CCMP2712] >gi|428173180|gb|EKX42084.1| hypothetical protein GUITHDRAFT_46932, partial [Guillardia theta CCMP2712]) HSP 1 Score: 296.975 bits (759), Expect = 9.717e-94 Identity = 158/298 (53.02%), Postives = 206/298 (69.13%), Query Frame = 0
Query: 162 PVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQC-QVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADLP 458
P PA+EL+NRAV + K D +KNQRQRARK A +L L+K ++KP ++L+ Y+ L L PFE +ADLTV++R G+ SLP+ LK + ELRK +E K AAK A S++ +E + +E L V+ L+++ + LR +P+V + TVVLVG+PNVGKSSIVR+ISTGTPEVNNYPFTTRGMTLGH+ +D E C QVMDTPG+L R D+ERNEME LTLASM HL + ++FVLDLTG SG SSI +Q+ +R+ LR RFP R W+DV+SKAD+P
Sbjct: 14 PRVFPADELVNRAVNRALSHKEDT-TVKNQRQRARKYAAEQLAILSKELTKPTGEILEGYEKILKNLSPFEKVVADLTVKSRELAGYGSLPDTLKGLQELRKDTMEVCKAGTKAAKEAVSRKLTLEEVDVAIASIEELWERDGWVLDLLLNMGQELRSVPMVDPELDTVVLVGSPNVGKSSIVRSISTGTPEVNNYPFTTRGMTLGHI-LDDLGEQICQQVMDTPGLLPRSDQERNEMEKLTLASMEHLNSVIIFVLDLTGESGIKSSISDQLSVRDELRIRFPDREWIDVVSKADIP 309
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|1026770589|gb|OAE30388.1| (hypothetical protein AXG93_3612s1110 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 273.092 bits (697), Expect = 7.169e-82 Identity = 161/382 (42.15%), Postives = 227/382 (59.42%), Query Frame = 0
Query: 130 NQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKAD----------LPMDQEDPAVARAPAGALKVSVADGTGLAEVEARVKEMLLDVREV 501
QTAEV S +++ +++ R G + LP+ PANE+L A+R +K +K + I N +R R GA +LD L K ++ PLR L+ + + LH +E L +LT+ G EVL V+ LRK +L+ GK +A+ +T+K EA E E GF +E L + V DL + K LR +P+V++ PT+ LVGAPNVGKSS+VR +S+G PEV NYPFTTRG+++GH + E + QV DTPG+L RPD+ERN +E LT+A++ HLPT+V++V DLTG G +++ NQ I N +R RF RPW+DV+SKAD L +D P GAL VSV G G+ E+ RV +LL+ V
Sbjct: 101 QQTAEV---SSASAQVEQMASREQKLGAFQQLPMVSPANEILVSALRRAKMVKATK-GIVNAAKRERNKGAKQLDALIKELTTPLRLYLQKFP-QRRHLHAYERALLELTL------GDGMYEEVLARVDLLRKKILDLGKNYASLCAKSTTKAEAEERLEEGFSRLEELFKKQGKAVDDLKEHAKTLRAMPVVRIRTPTLCLVGAPNVGKSSLVRILSSGKPEVCNYPFTTRGISMGHFEIES---RRFQVTDTPGLLKRPDDERNNIEKLTIAALAHLPTSVLYVHDLTGECG--TTVPNQFAIYNEMRERFADRPWLDVVSKADLLPPPPTDGSLEVDDLHSYALSGPKGALWVSVYSGQGIDELVRRVHSLLLEAHPV 466
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|168038141|ref|XP_001771560.1| (predicted protein [Physcomitrella patens] >gi|162677116|gb|EDQ63590.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 266.544 bits (680), Expect = 3.205e-81 Identity = 156/353 (44.19%), Postives = 218/353 (61.76%), Query Frame = 0
Query: 145 LKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEV-LKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADL--------PMDQEDPAVARAPAGALKVSVADGTGLAEVE 488
LK+ +R G + LPV P E+L A+R +K +K + I+N +R R GA +LD LTK ++ PL+ +K + E LHP+E +L +LT+ G + EV L+ V+ LRK +L+ GK A+ +TSK+EA E E G ++E + V DL ++ K LR +P+V PTV LVGAPNVGKSS+VR +S+G PEV NYPFTTRG+++GH + D V + QV DTPG+LNRPD+ERN +E LTLA++ HLPTAV++V DLTG G +++ +Q I ++ FP+RPW+DV+SKADL P + + V PAGAL+VS GL EV
Sbjct: 9 LKQIAVKRRDIGAFQQLPVVSPGIEILGTALRRTKMIK-PTKGIQNAAKRERNRGAKQLDALTKELTIPLKGYVKNFP-ECQQLHPYEQSLLELTL------GPGTYEEVTLRRVDLLRKRILDYGKNCASLCAKSTSKREAEERLEEGITKLEDMFKRHGKAVDDLKEIAKVLRAMPVVHPRTPTVCLVGAPNVGKSSLVRILSSGKPEVCNYPFTTRGISMGHF-FVDSV--RYQVTDTPGILNRPDDERNNIEKLTLAALAHLPTAVLYVHDLTGECG--TTVSDQFSIYKHIKGLFPERPWLDVVSKADLLETPPAHIPALEAEAYVLVGPAGALRVSTQTEHGLDEVH 348
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|769817316|ref|XP_006838465.2| (nucleolar GTP-binding protein 1 [Amborella trichopoda]) HSP 1 Score: 264.618 bits (675), Expect = 2.003e-79 Identity = 155/357 (43.42%), Postives = 222/357 (62.18%), Query Frame = 0
Query: 155 TGGLKNLPVTPPANELLNRAVRLSKWLKVDEEK-IKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKAD-LPMD-------QEDPAVAR----APAGALKVSVADGTGLAEVEARVKEMLL 496
TG + LP+ P+N+LL A++ +K +V K I N +R R GA +LD L K ++ PLR +K + Y+ + LHP+E +L +LT+ G + EVL V+ +RK V+ GK A+ ++SK+EA + G R +E + + V DL++V KALR +P+V +PT+ LVG+PNVGKSS+VR +STG PEV NYPFTTRG+ +GH L YE Q QV DTPG+L RP++ERN +E LTLA ++HLPTAV+FV DL+G G SS +Q + +R RFP + W+DV+SK D LP D ED + R P GA+ VSV G G+ +++++V ++LL
Sbjct: 82 TGAFQKLPMVLPSNDLLLSALKKAK--RVSPTKGIANIAKRERNRGARQLDQLMKELAVPLRGYVKMFPYKRS-LHPYEQSLIELTL------GEGTYEEVLGRVDTIRKKVVSVGKEQASLCAKSSSKREAEDRLGEGLRRIEEIFQREGNAVDDLVNVAKALRVMPVVNPEIPTLCLVGSPNVGKSSLVRVLSTGRPEVCNYPFTTRGILMGHIVLNYE-----QFQVTDTPGLLKRPEDERNNLEKLTLAVLMHLPTAVLFVHDLSGECG--SSPSDQFETYKEIRERFPDQLWLDVVSKCDLLPYDITSEKGNIEDDELERYKRAGPEGAIHVSVMSGIGIDKLKSKVHDLLL 422
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|548840971|gb|ERN01034.1| (hypothetical protein AMTR_s00002p00146270 [Amborella trichopoda]) HSP 1 Score: 264.618 bits (675), Expect = 2.003e-79 Identity = 155/357 (43.42%), Postives = 222/357 (62.18%), Query Frame = 0
Query: 155 TGGLKNLPVTPPANELLNRAVRLSKWLKVDEEK-IKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKAD-LPMD-------QEDPAVAR----APAGALKVSVADGTGLAEVEARVKEMLL 496
TG + LP+ P+N+LL A++ +K +V K I N +R R GA +LD L K ++ PLR +K + Y+ + LHP+E +L +LT+ G + EVL V+ +RK V+ GK A+ ++SK+EA + G R +E + + V DL++V KALR +P+V +PT+ LVG+PNVGKSS+VR +STG PEV NYPFTTRG+ +GH L YE Q QV DTPG+L RP++ERN +E LTLA ++HLPTAV+FV DL+G G SS +Q + +R RFP + W+DV+SK D LP D ED + R P GA+ VSV G G+ +++++V ++LL
Sbjct: 82 TGAFQKLPMVLPSNDLLLSALKKAK--RVSPTKGIANIAKRERNRGARQLDQLMKELAVPLRGYVKMFPYKRS-LHPYEQSLIELTL------GEGTYEEVLGRVDTIRKKVVSVGKEQASLCAKSSSKREAEDRLGEGLRRIEEIFQREGNAVDDLVNVAKALRVMPVVNPEIPTLCLVGSPNVGKSSLVRVLSTGRPEVCNYPFTTRGILMGHIVLNYE-----QFQVTDTPGLLKRPEDERNNLEKLTLAVLMHLPTAVLFVHDLSGECG--SSPSDQFETYKEIRERFPDQLWLDVVSKCDLLPYDITSEKGNIEDDELERYKRAGPEGAIHVSVMSGIGIDKLKSKVHDLLL 422
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|922500948|ref|XP_013588131.1| (PREDICTED: nucleolar GTP-binding protein 1-like [Brassica oleracea var. oleracea]) HSP 1 Score: 261.536 bits (667), Expect = 4.080e-78 Identity = 171/448 (38.17%), Postives = 249/448 (55.58%), Query Frame = 0
Query: 68 LSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIR--ARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADL-------PMDQEDPAVARA---------PAGALKVSVADGTGLAEVEARVKEML 495
L++PP+L L F+ S +S + PP P++R R Q +P V + L + E P+SP K P + G + LP+ P+ +L + A+R SK ++ + I N +R R GA +LD L K ++ PL+ ++++ LHP+E +L +LT+ G + EVL V+ LRK VL GK HA+ A SK+EA + G ++E + + V DL+ + K LR +P+V L MPT+ LVGAPNVGKSS+VR +STG PE+ NYPFTTRG+ +GH L Y+ + QV DTPG+L R DE+RN +E LTLA + HLPTAV++V DLTG G +S +Q +I ++ RF W+DV+SK DL +ED + A P G++ VSV GL+E+++RVKE+L
Sbjct: 16 LASPPQLYLQAFVFSTASSTTKSPPTFWS------PTLRRQCRNLQTAVSPVVTSSYLPTSYITQKQIE-TPTSPE----KEGPPMQESLGAFQKLPMVMPSIDLYSSALRKSKRVQ-PTKGIANIAKRERNRGAKQLDALMKELALPLKGYMESFPRR-RFLHPYERSLIELTL------GDGNYEEVLGKVDALRKKVLSVGKEHASLCAKALSKREAEDRLSEGVEKLELVFQQQGIAVDDLLSIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHVILNYQRF-----QVTDTPGLLRRCDEDRNNLEKLTLAVLTHLPTAVLYVHDLTGECG--TSTSDQFRIYKEIKERFEDYLWIDVVSKCDLLGGGSPVIYAKEDASNDEAEIIRYRETGPDGSIHVSVKTEQGLSELKSRVKEVL 437
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|1079428450|ref|XP_018508895.1| (PREDICTED: nucleolar GTP-binding protein 1 [Brassica rapa]) HSP 1 Score: 259.225 bits (661), Expect = 3.461e-77 Identity = 167/446 (37.44%), Postives = 247/446 (55.38%), Query Frame = 0
Query: 68 LSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADL------------PMDQEDPAVAR----APAGALKVSVADGTGLAEVEARVKEML 495
L++PP+L LP FI S +S + P P + + R Q +P V + L + E ASP K P + G + LP+ P+ +L + A+R SK ++ + I N +R R GA +LD L K ++ PL+ ++++ +LHP+E +L +LT+ G + EVL V+ LRK V GK HA+ A SK+EA + G ++E + + V +L+ + K LR +P+V L MPT+ LVGAPNVGKSS+VR +STG PE+ NYPFTTRG+ +GH L Y+ + QV DTPG+L R DE+RN +E LTLA + HLPTAV++V DLTG G +S +Q +I ++ RF W+DV+SK DL + ++ + R P G++ VSV GL+E+++RVKE+L
Sbjct: 16 LASPPQLYLPAFIFSTASSTPKSPTFWSPTLR------QCRNLQTAVSPVVTSSYLPTSYITQKQIET-----PASPEKEGPPMQESLGAFQKLPMVMPSIDLYSSALRKSKRVQ-PTKGIANIAKRERNRGAKQLDALMKELALPLKGYMESFPRR-RLLHPYERSLIELTL------GDGNYEEVLGKVDALRKKVQSVGKEHASLCAKALSKREAEDRLSEGVEKLELVFQQQGIAVDELLSIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHVILNYQRF-----QVTDTPGLLRRCDEDRNNLEKLTLAVLTHLPTAVLYVHDLTGECG--TSPSDQFRIYKEIKERFEDYLWIDVVSKCDLLGGGSPVIYAKEDISNDEAEIIRYRETGPDGSIHVSVKTEQGLSELKSRVKEVL 435
BLAST of EWM27636.1 vs. NCBI_GenBank
Match: gi|674965723|emb|CDX67966.1| (BnaA07g20060D [Brassica napus]) HSP 1 Score: 256.914 bits (655), Expect = 6.235e-76 Identity = 171/469 (36.46%), Postives = 257/469 (54.80%), Query Frame = 0
Query: 58 ASVWVSRASSLSAPPRLPLPLFIISRYTSQHQKPPPQHPLRKAALPSIRARYSQRPATPTVLEANLTLGASPNQTAEVNPSSPSASPLKRARPRRTVTGGLKNLPVTPPANELLNRAVRLSKWLKVDEEKIKNQRQRARKLGALKLDTLTKSISKPLRDVLKAYDYELAVLHPFEATLADLTVRARAKQGHQSLPEVLKAVNELRKSVLETGKRHAAAAKNATSKQEAIEATEAGFREVESLMLEGADVVLDLIDVQKALRKIPIVQLGMPTVVLVGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGH--LQYEDWVEGQCQVMDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQIRNGLRARFPKRPWVDVISKADL--------------PMDQEDPAVAR--APAGALKVSVADGTGLAEVEARVKEML-LDVREVLSAIGL 507
+S++ ++ L++ P+L L FI+S T+ K P R Q +P V + L + E PSSP K+ P + G + LP+ P+ +L + A+R SK ++ + I N +R R GA +LD K ++ PL+ ++++ +LHP+E +L +LT+ G EVL V+ LRK VL GK HA+ A SK+EA + G ++E + + V DL+ + K LR +P+V L MPT+ LVGAPNVGKSS+VR +STG PE+ NYPFTTRG+ +GH L Y+ + QV DTPG+L R DE+RN +E LTLA + HLPTAV++V DLTG G +S +Q +I ++ RF W+DV+SK DL D+E+ R P A VSV GL+E++++VKE+L +++ ++ S +G+
Sbjct: 39 SSLFPNQWRLLASSPQLYLQSFILS--TASTTKSPTLRQYRNL----------QTSVSPVVTSSYLPTSYITQKQIE-TPSSPE----KKGPPVQESLGAFQKLPMVMPSIDLYSSALRKSKRVQPTKGCIANIAKRERNRGAKQLDAFMKELALPLKGYMESFPRR-RLLHPYERSLIELTL------GDGKYEEVLGKVDALRKKVLSVGKEHASLCAKALSKREAEDRLSEGVEKLELVFQQEGRAVDDLLSIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHVILNYQRF-----QVTDTPGLLRRCDEDRNNLEKLTLAVLTHLPTAVLYVHDLTGECG--TSPSDQFRIYKEIKERFKDYQWIDVVSKCDLLGGGSPVMYAKEDRSNDEEEIIKYRVTGPDEAFHVSVKTEQGLSELKSKVKEVLSIEMEKIKSRVGV 476 The following BLAST results are available for this feature:
BLAST of EWM27636.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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