EWM27633.1, cds3026 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|585109903|gb|EWM27633.1| (dna-damage-repair toleration protein drt102 [Nannochloropsis gaditana]) HSP 1 Score: 410.223 bits (1053), Expect = 4.174e-145 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0 Query: 1 MHYITSVSRVNDSTKGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDEI 196 MHYITSVSRVNDSTKGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDEI Sbjct: 1 MHYITSVSRVNDSTKGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDEI 196
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|1175885012|ref|XP_020596195.1| (DNA damage-repair/toleration protein DRT102-like [Phalaenopsis equestris]) HSP 1 Score: 139.043 bits (349), Expect = 2.678e-37 Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 0 Query: 15 KGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 K P PA+ + WP ++QSFL+ S +A++ + ++ C +CC+ FQPV + GAE R++PT AVV+F GS+EP HHHT GHDV V KGRK+V NL +S+EL G YL+T AG++ RV Y+EDTEF + DG +D+F DE Sbjct: 92 KSPCPASGDQPWPTDIQSFLENSTAEMAQI---------------------------PKPDSSSSNCAICCL---RKELVFQPVEIMPGAEMKIVRESPTSAVVKFKAGSLEPAHHHTFGHDVLVMKGRKKVWNLDKNESYELGEGDYLFTPAGDKHRVNYFEDTEFFIRWDGDWDIFLDE 242
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|302754468|ref|XP_002960658.1| (hypothetical protein SELMODRAFT_73417 [Selaginella moellendorffii] >gi|300171597|gb|EFJ38197.1| hypothetical protein SELMODRAFT_73417 [Selaginella moellendorffii]) HSP 1 Score: 138.658 bits (348), Expect = 1.284e-36 Identity = 73/181 (40.33%), Postives = 96/181 (53.04%), Query Frame = 0 Query: 15 KGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 K P PAN+ WP+E+ +FLD S+P + + + A P G C +C +++ S F PV + G W R PT AVVRF GS+EP HHHT GHDV V +GRKRV N+T G+ F+L G +LYT AG+ RV Y DTEF + DG +D+ DE Sbjct: 132 KSPCPANQGNPWPEEIHAFLDKSLPEMEAIGGAASAKI------------------PNSSGAAGSDCAICELASARS---FDPVDIMPGGSWKILRQEPTSAVVRFKAGSLEPAHHHTFGHDVIVLEGRKRVWNVTKGEVFDLGTGDFLYTPAGDVHRVQYVTDTEFFIRWDGLWDILLDE 291
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|302803251|ref|XP_002983379.1| (hypothetical protein SELMODRAFT_234225 [Selaginella moellendorffii] >gi|300149064|gb|EFJ15721.1| hypothetical protein SELMODRAFT_234225 [Selaginella moellendorffii]) HSP 1 Score: 138.272 bits (347), Expect = 1.298e-36 Identity = 73/181 (40.33%), Postives = 97/181 (53.59%), Query Frame = 0 Query: 15 KGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 K P PAN+ WP+E+ +FLD S+P + + + A P G C +C +++ S F PV + G W R PT AVVRF GS+EP HHHT GHDV V +GRKRV N+T G+ F+L+ G +LYT AG+ RV Y DTEF + DG +D+ DE Sbjct: 132 KSPCPANQGNPWPEEIHTFLDKSLPEMEAIGGAASA------------------KNPNSSGAAGSDCAICELASARS---FDPVDIMPGGSWKILRQEPTSAVVRFKAGSLEPAHHHTFGHDVIVLEGRKRVWNVTKGEVFDLATGDFLYTPAGDVHRVQYVTDTEFFIRWDGLWDILLDE 291
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|1175883700|ref|XP_020595494.1| (DNA damage-repair/toleration protein DRT102-like [Phalaenopsis equestris]) HSP 1 Score: 138.658 bits (348), Expect = 1.303e-36 Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 0 Query: 15 KGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 K P PA+ + WP ++QSFL+ S +A++ + ++ C +CC+ FQPV + GAE R++PT AVV+F GS+EP HHHT GHDV V KGRK+V NL +S+EL G YL+T AG++ RV Y+EDTEF + DG +D+F DE Sbjct: 147 KSPCPASGDQPWPTDIQSFLENSTAEMAQI---------------------------PKPDSSSSNCAICCL---RKELVFQPVEIMPGAEMKIVRESPTSAVVKFKAGSLEPAHHHTFGHDVLVMKGRKKVWNLDKNESYELGEGDYLFTPAGDKHRVNYFEDTEFFIRWDGDWDIFLDE 297
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|657992794|ref|XP_008388656.1| (PREDICTED: DNA-damage-repair/toleration protein DRT102 [Malus domestica]) HSP 1 Score: 137.502 bits (345), Expect = 3.353e-36 Identity = 70/186 (37.63%), Postives = 101/186 (54.30%), Query Frame = 0 Query: 10 VNDSTKGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 +N K P PA+ + WP E++SFLD S+ + ++ + + V +++ C +CC+ N P+ + G R+ PT A+VRF GSVEP HHHT GHD+ V G+K V NLT K F+L+ G YL+T AG+ RV YYEDTEF++ DG +D+F+DE Sbjct: 133 LNTPFKSPCPASDSKPWPAEIESFLDNSIQEMPKIGGANKIV-----------------------DSEEASCAICCLV---KNRELNPIDIIPGGSMKILRETPTSAIVRFKAGSVEPAHHHTFGHDLVVLWGKKSVWNLTKEKRFDLTGGDYLFTPAGDVHRVKYYEDTEFLITWDGHWDMFFDE 292
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|1201319820|gb|OVA18853.1| (Sugar-phosphate isomerase [Macleaya cordata]) HSP 1 Score: 137.117 bits (344), Expect = 3.527e-36 Identity = 72/181 (39.78%), Postives = 103/181 (56.91%), Query Frame = 0 Query: 15 KGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 K P PA+ WP E++SFLD S+ ++++ + +Q K+DE + C +CC++ N F PV + G R++PT A+VRF GSVEP HHHT GHD+ V KG KRV NLT ++++L G +L+T AG+ RV Y+EDTEF + DG +D+F DE Sbjct: 136 KSPCPASGNNPWPSEIESFLDESVTEMSKIGS----------DQIKKDESET--------------CAICCLA---KNREFSPVEIMPGGSMKIVRESPTSAIVRFKAGSVEPAHHHTFGHDLVVMKGSKRVWNLTKKENYDLGVGDFLFTPAGDVHRVKYFEDTEFFIKWDGHWDIFLDE 289
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|658061958|ref|XP_008366864.1| (PREDICTED: DNA-damage-repair/toleration protein DRT102-like [Malus domestica]) HSP 1 Score: 137.502 bits (345), Expect = 3.935e-36 Identity = 70/186 (37.63%), Postives = 101/186 (54.30%), Query Frame = 0 Query: 10 VNDSTKGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 +N K P PA+ + WP E++SFLD S+ + ++ + + V +++ C +CC+ N P+ + G R+ PT A+VRF GSVEP HHHT GHD+ V G+K V NLT K F+L+ G YL+T AG+ RV YYEDTEF++ DG +D+F+DE Sbjct: 133 LNTPFKSPCPASDSKPWPAEIESFLDNSIQEMPKIGGANKIV-----------------------DSEEASCAICCLV---KNRELNPIDIIPGGSMKILRETPTSAIVRFKAGSVEPAHHHTFGHDLVVLWGKKSVWNLTKEKRFDLTGGDYLFTPAGDVHRVKYYEDTEFLITWDGHWDMFFDE 292
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|1098765396|ref|XP_018845848.1| (PREDICTED: DNA-damage-repair/toleration protein DRT102-like [Juglans regia]) HSP 1 Score: 136.732 bits (343), Expect = 7.247e-36 Identity = 67/181 (37.02%), Postives = 100/181 (55.25%), Query Frame = 0 Query: 15 KGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 K P PA+ + WP+++QSFLD S+ + ++ + Q+ + + C +CC+ N P+ + G R++PT A+VRF GSVEP HHHT GHD+ V +G+K V NLT + ++L G YL+T AG+ RV YYEDTEF + DG++D+F+DE Sbjct: 140 KAPCPASGSKPWPEDIQSFLDNSLSEMPKIGSESQS-----------------------DPDSTATCAICCLV---KNRELNPIDLIPGGSMKILRESPTSAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKKEKYDLVVGDYLFTPAGDVHRVKYYEDTEFFIKWDGKWDMFFDE 294
BLAST of EWM27633.1 vs. NCBI_GenBank
Match: gi|1098765398|ref|XP_018845850.1| (PREDICTED: DNA-damage-repair/toleration protein DRT102-like [Juglans regia]) HSP 1 Score: 136.732 bits (343), Expect = 8.415e-36 Identity = 67/181 (37.02%), Postives = 100/181 (55.25%), Query Frame = 0 Query: 15 KGPAPANKCEGWPDEVQSFLDGSMPALAELDASRQAVFSPTEEQEKEDEKRSHECGPEREENKGGRCPVCCISAGSSNHPFQPVAGVQGAEWVQTRDAPTRAVVRFNGGSVEPTHHHTHGHDVFVTKGRKRVENLTLGKSFELSAGSYLYTGAGERDRVVYYEDTEFILCCDGRFDVFWDE 195 K P PA+ + WP+++QSFLD S+ + ++ + Q+ + + C +CC+ N P+ + G R++PT A+VRF GSVEP HHHT GHD+ V +G+K V NLT + ++L G YL+T AG+ RV YYEDTEF + DG++D+F+DE Sbjct: 140 KAPCPASGSKPWPEDIQSFLDNSLSEIPKIGSESQS-----------------------DPDSTATCAICCLV---KNRELNPIDLIPGGSMKILRESPTSAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKKEKYDLVVGDYLFTPAGDVHRVKYYEDTEFFIKWDGKWDMFFDE 294 The following BLAST results are available for this feature:
BLAST of EWM27633.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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