EWM27659.1, cds3016 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|585109929|gb|EWM27659.1| (SEC-C motif-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 717.613 bits (1851), Expect = 0.000e+0 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0 Query: 1 MGKRGPGLVRRKGNMGSHSRKDEYITAPEGRWNGGKQQKQKGKRFDKDEEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSIPGAEIKERGDEDDELRRKTRKEMADISDESDGSIDRDEPRATEEKVLKRGGQCPCRSGKKWRKCCRKVERQRQRHIHHMNGYNAMRHEQVHEEHVKNGIGEEKLAVRLAAISL 345 MGKRGPGLVRRKGNMGSHSRKDEYITAPEGRWNGGKQQKQKGKRFDKDEEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSIPGAEIKERGDEDDELRRKTRKEMADISDESDGSIDRDEPRATEEKVLKRGGQCPCRSGKKWRKCCRKVERQRQRHIHHMNGYNAMRHEQVHEEHVKNGIGEEKLAVRLAAISL Sbjct: 1 MGKRGPGLVRRKGNMGSHSRKDEYITAPEGRWNGGKQQKQKGKRFDKDEEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSIPGAEIKERGDEDDELRRKTRKEMADISDESDGSIDRDEPRATEEKVLKRGGQCPCRSGKKWRKCCRKVERQRQRHIHHMNGYNAMRHEQVHEEHVKNGIGEEKLAVRLAAISL 345
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|298704741|emb|CBJ28337.1| (OTU domain-containing protein, putative [Ectocarpus siliculosus]) HSP 1 Score: 162.155 bits (409), Expect = 3.126e-43 Identity = 106/290 (36.55%), Postives = 141/290 (48.62%), Query Frame = 0 Query: 53 FMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAK-PFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSIPGAEIKE----------RGDEDDELRRKTRKE--MADISDES-----------DGSIDRDEPR-------------------ATEEKVLKRGGQCPCRSGKKWRKCCRK 299 F VE +G +I + DGNCLFR+LADQL GR EDH +R V+D ++ + F P++EDDE F DY+ RMR E EWGG QE+ AAS+ + NVV+HQ PRF I + + TIHLS+HG HYNS+RA +GD A P L +T L T + + SP +S P A RGD+ EL R E + + D + DG ++P+ K + R CPC SG K++KCCRK Sbjct: 47 FEAQVEQIGCKIKFIQGDGNCLFRSLADQLEGRSEDHSSVRAKVMDHLQRNREVFEPYMEDDETFGDYLERMRGEAEWGGNQELVAASQLYKTNVVVHQFKAPRFFIPCEKARRTIHLSYHGEHHYNSVRA------IGDEANGPALPIT---LQTPTSKGGSHKRESPWPEEEAAVARSCPWASPPNIVAALETTGGRGDDAIELLIAARNEPGLEEGVDNTAGDKKGTGKLEDGGDSGEKPQENGRPGEGKGRGGGVAKKSEKAAKKVARASDCPCGSGLKYKKCCRK 327
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|1004138158|gb|KXZ46175.1| (hypothetical protein GPECTOR_46g244 [Gonium pectorale]) HSP 1 Score: 151.369 bits (381), Expect = 3.488e-38 Identity = 72/159 (45.28%), Postives = 94/159 (59.12%), Query Frame = 0 Query: 36 KQQKQKGKRFDKDE------EQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKA--SAPTIHLSFHGASHYNSIRAWDD 186 K K KGKR K + LG RI + DGNC FRAL+DQL+G + HG++R V+ +I H+ DFAPF+EDDE F YV RMR +G W G E+ AASRC N+ I+Q PR+ +L + +AP +HLS+H HYNS+R DD Sbjct: 36 KATKDKGKRAGKGAWHVSSGGDDLEAELASLGLRIKEIVGDGNCFFRALSDQLQGDEKSHGQLRARVVGYIGEHQDDFAPFIEDDESFGSYVARMRKDGTWAGYMEVVAASRCLEANLTIYQAGQPRWRVLSQPEDAAPMLHLSYHDGQHYNSVRCADD 194
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|1052178425|ref|XP_017698107.1| (PREDICTED: OTU domain-containing protein 3 isoform X4 [Phoenix dactylifera]) HSP 1 Score: 141.739 bits (356), Expect = 9.173e-36 Identity = 90/269 (33.46%), Postives = 132/269 (49.07%), Query Frame = 0 Query: 39 KQKGKRFDKDEEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKAS--APTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSIPGAEIK-ERGDEDDELRRKTRKEMADISDESDGSIDRDEPRAT-------EEKVLKRGGQCPCRSGKKWRKCC 297 KQ GK D F ++ LG +I+ + +DGNC FRALADQL G E+H + R V+ +I H DF PF+EDD F +Y M +G W G E+ AAS N+ IH+L PR+ I +S A IHL +H HYNS+R +D C PAKP + + L F L + ++ +E GD+ +E+ + E A ++ + + + R + E+K + R +CPC S KK++ CC Sbjct: 20 KQHGKL---DAVAEFRSQLDVLGLKIIQVTADGNCFFRALADQLEGNEEEHKKYRDMVVQYILNHREDFEPFIEDDVPFDEYCQSMEKDGTWAGHMELQAASLVTRRNICIHRLRSPRWYINNFSSHGASMIHLCYHDGEHYNSVRLKEDSCE--GPAKPII-IEVLQEVDGDVDAAVEF-----LIADQDSDDNVHASEDNVYHGDDQNEI--CGQPETASMNTKCEAGVARSNTQPVQSHSIQHEDKKIPRNKECPCGSKKKYKACC 275
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|1052178423|ref|XP_017698106.1| (PREDICTED: OTU domain-containing protein 3 isoform X3 [Phoenix dactylifera]) HSP 1 Score: 140.584 bits (353), Expect = 2.760e-35 Identity = 90/270 (33.33%), Postives = 130/270 (48.15%), Query Frame = 0 Query: 39 KQKGKRFDKDEEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKAS--APTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSIPGAEIKERGD--EDDELRRKTRKEMADISDESDGSIDRDEPRAT-------EEKVLKRGGQCPCRSGKKWRKCC 297 KQ GK D F ++ LG +I+ + +DGNC FRALADQL G E+H + R V+ +I H DF PF+EDD F +Y M +G W G E+ AAS N+ IH+L PR+ I +S A IHL +H HYNS+R +D C PAKP + + L F L + ++ +E D DD+ + E A ++ + + + R + E+K + R +CPC S KK++ CC Sbjct: 20 KQHGKL---DAVAEFRSQLDVLGLKIIQVTADGNCFFRALADQLEGNEEEHKKYRDMVVQYILNHREDFEPFIEDDVPFDEYCQSMEKDGTWAGHMELQAASLVTRRNICIHRLRSPRWYINNFSSHGASMIHLCYHDGEHYNSVRLKEDSCE--GPAKPII-IEVLQEVDGDVDAAVEF-----LIADQDSDDNVHASEDNVYHDCPGDDQNEICGQPETASMNTKCEAGVARSNTQPVQSHSIQHEDKKIPRNKECPCGSKKKYKACC 278
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|661894073|emb|CDP02514.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 138.658 bits (348), Expect = 3.708e-34 Identity = 97/314 (30.89%), Postives = 139/314 (44.27%), Query Frame = 0 Query: 39 KQKGKRFDKDEEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEI--LFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLS-TSKTSTLTSFSSSPSLAPHRREGKSIPGAEIKERGDEDDELRRKTRKEMADISD-------------------------------ESDGSIDRDEPRATEEKV------------------LKRGGQCPCRSGKKWRKCCRKV 300 K+ GK+ D E F Q ++ LG +I+ + +DGNC FRALADQL G E+H + R V+ FI + F PF+ED+ F +Y M +G W G E+ AAS H N+ IH+ PR+ I A IHLS+H HYNS+R+ DD C PA+P + LS TS + + S +A + + + + + G ED E +K +E+ +D E D I + E+K + R CPC S KK++ CCR V Sbjct: 19 KKAGKQADISE---FKQQLDALGLKIIQVTADGNCFFRALADQLEGNEEEHEKYRNMVVRFIMKNREMFEPFIEDEVPFDEYCQSMEKDGTWAGHMELQAASLVTHCNICIHRHISPRWYIQNFDNCEAKMIHLSYHDGEHYNSVRSKDDTC--AGPARPIVIKADADLSATSHHAKSATTKSMGDIAGNNVQPRCLKMV-MTGSGCEDVEKVKKVLQEVGGDADAAIEYLIAQQNSEESLQENVQLYISENTVHGEHDSEILEQQSMQNEKKTGNTQMTQIENSLSLDDKKIPRNKACPCGSKKKYKSCCRSV 326
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|224081718|ref|XP_002306480.1| (hypothetical protein POPTR_0005s18390g [Populus trichocarpa] >gi|222855929|gb|EEE93476.1| hypothetical protein POPTR_0005s18390g [Populus trichocarpa]) HSP 1 Score: 137.502 bits (345), Expect = 4.987e-34 Identity = 92/298 (30.87%), Postives = 137/298 (45.97%), Query Frame = 0 Query: 36 KQQKQKGKRFDKDEEQ-------RFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEI--LFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSI------PGAEIKER---------GDEDDELRRKTRKEMADISDESDGSIDRDEPRATEE--------KVLKRGGQCPCRSGKKWRKCCRKVE 301 KQQK K K+ ++Q +F ++ LG +I+ + +DGNC FR LADQL G E+HG+ R V+ +I F PF+EDD F +Y M +G W G E+ AAS H N+ +H+ PR+ I + A +HLS+H HYNS+R+ DDPC PA+P + LS + S+ +A + S+ G E E+ GD D + ++ +D + S+ D + E K + R C C S KK + C V+ Sbjct: 5 KQQKSKPKKTPHVKKQGKQANIVQFRAQLDALGLKIIEVTADGNCFFRGLADQLEGNEEEHGKYRSMVVQYIMNTREMFEPFIEDDVPFDEYCQLMEKDGTWAGHMELQAASLVTHSNICVHRYMSPRWYIRNFDQHGARMVHLSYHDEEHYNSVRSKDDPC--NGPAQPIIIKVDADLSATSVQAKAVSSTKAGIAKDSFDAGSLKLVMAGSGCENAEKVKQVLLEVDGDVDAAIEFLIAEQESDSFSAENNSLCSDTNISYENLMVLYTFRKKIPRNKDCSCGSKKKHKAYCGAVK 300
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|971511706|dbj|GAQ86487.1| (hypothetical protein KFL_002920040 [Klebsormidium nitens]) HSP 1 Score: 137.887 bits (346), Expect = 7.611e-34 Identity = 66/147 (44.90%), Postives = 87/147 (59.18%), Query Frame = 0 Query: 53 FMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEI--LFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPF 197 F + + +G +I + +DGNC FRA+ADQL G DH R+ V++++ AHE DFAPFVEDD Y+ MR +G W G E+ AAS N+ IH++ PR+ I A TIHLS+H HYNS+R DDP G PA P Sbjct: 63 FREQLRVIGLKIQEVTADGNCFFRAIADQLEGDAGDHVAYRERVVEYMAAHEADFAPFVEDDVPLEKYLQEMREDGTWAGNMELQAASLVTRANICIHRVQSPRWHIRNFDVAETRTIHLSYHDGEHYNSVRREDDPG--GGPALPI 207
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|719970109|ref|XP_010270437.1| (PREDICTED: OTU domain-containing protein 3 isoform X3 [Nelumbo nucifera]) HSP 1 Score: 137.887 bits (346), Expect = 1.106e-33 Identity = 71/172 (41.28%), Postives = 96/172 (55.81%), Query Frame = 0 Query: 39 KQKGKRFDKDEEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEI--LFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTS 208 K++GK+ D E F ++ LG +++ + +DGNC FRALADQL G E+HG+ R V+ +I H +F PF+EDD F +Y M +G W G E+ AAS N+ IHQL PR+ I IHLS+H HYNS+R DD C PAKP + LS + Sbjct: 18 KKQGKQSDLSE---FCSQLDALGLKVVQVTADGNCFFRALADQLEGNEEEHGKYRHMVVQYILKHREEFEPFIEDDIPFDEYCQSMEKDGTWAGHMELQAASLVTRSNICIHQLMSPRWYIRNFDNRGIRMIHLSYHNEEHYNSVRLKDDECN--GPAKPIVIKADAVLSAT 184
BLAST of EWM27659.1 vs. NCBI_GenBank
Match: gi|567963045|gb|ETK88553.1| (hypothetical protein L915_07213 [Phytophthora parasitica] >gi|568020990|gb|ETL95099.1| hypothetical protein L917_07054 [Phytophthora parasitica] >gi|570953169|gb|ETP18426.1| hypothetical protein F441_07363 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 135.191 bits (339), Expect = 1.377e-33 Identity = 63/138 (45.65%), Postives = 89/138 (64.49%), Query Frame = 0 Query: 56 HVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKAS---APT--IHLSFHGASHYNSIRAWDDPC 188 + D+G ++ +++DGNCLFRAL DQL G H E+R+ ++ ++E H DF PF+ED+EKF Y RMR +G WGG QE+ AA+R F V VV+HQ D P I+ PT +H+++HG HY+S+RA DP Sbjct: 59 QLADVGCKLHEVEADGNCLFRALGDQLYGDQHQHEEVRKKIVSYLEQHRDDFEPFMEDEEKFEKYCERMREDGTWGGNQELYAAARLFQVYVVVHQ-DQPSARIMMIECDRLKPTRFVHVAYHGEDHYDSVRALKDPV 195 The following BLAST results are available for this feature:
BLAST of EWM27659.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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