EWM27669.1, cds3010 (CDS) Nannochloropsis gaditana

Overview
NameEWM27669.1
Unique Namecds3010
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:494181..496118 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27669.1
Productglutamyl-trna reductase
Orig transcript idgnl|cribi|Naga_100125g4.432.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:494181..496118 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0033014tetrapyrrole biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0050661NADP binding
GO:0008883glutamyl-tRNA reductase activity
Vocabulary: INTERPRO
TermDefinition
IPR018214GluRdtase_CS
IPR0158954pyrrol_synth_GluRdtase_N
IPR0003434pyrrol_synth_GluRdtase
IPR016040NAD(P)-bd_dom
IPR0158964pyrrol_synth_GluRdtase_dimer
IPR006151Shikm_DH/Glu-tRNA_Rdtase
Homology
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|585109940|gb|EWM27669.1| (glutamyl-trna reductase [Nannochloropsis gaditana])

HSP 1 Score: 1328.54 bits (3437), Expect = 0.000e+0
Identity = 645/645 (100.00%), Postives = 645/645 (100.00%), Query Frame = 0
Query:    1 MSCQRAEKFTLYAHTSLAGVRLPLYLLQKSAVRSLWDLSRGPIRSFAAYRGRPISCTSVTMCPLRVFFALLQLHILCVFGLGGYASSAGDARATGRNCPFRGWAVGKTSANTATSSCAFVAPSPPSRSAAALSSTTSEVAGPSSEGGFRTSMGLFVAPTTGHTAHSLSRRRRVGPALKPLYAATVAAPTASIPADAIAAAAEKKEKEANKKKRKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGKVIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            MSCQRAEKFTLYAHTSLAGVRLPLYLLQKSAVRSLWDLSRGPIRSFAAYRGRPISCTSVTMCPLRVFFALLQLHILCVFGLGGYASSAGDARATGRNCPFRGWAVGKTSANTATSSCAFVAPSPPSRSAAALSSTTSEVAGPSSEGGFRTSMGLFVAPTTGHTAHSLSRRRRVGPALKPLYAATVAAPTASIPADAIAAAAEKKEKEANKKKRKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGKVIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL
Sbjct:    1 MSCQRAEKFTLYAHTSLAGVRLPLYLLQKSAVRSLWDLSRGPIRSFAAYRGRPISCTSVTMCPLRVFFALLQLHILCVFGLGGYASSAGDARATGRNCPFRGWAVGKTSANTATSSCAFVAPSPPSRSAAALSSTTSEVAGPSSEGGFRTSMGLFVAPTTGHTAHSLSRRRRVGPALKPLYAATVAAPTASIPADAIAAAAEKKEKEANKKKRKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGKVIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|219112067|ref|XP_002177785.1| (glutamyl-trna reductase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410670|gb|EEC50599.1| glutamyl-trna reductase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 523.472 bits (1347), Expect = 1.320e-177
Identity = 254/463 (54.86%), Postives = 353/463 (76.24%), Query Frame = 0
Query:  188 PTASIPADAIAAAAEKKE-KEANKKKRKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGK--VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLN--NLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            P     + A+A AA+  E ++  +++R   +   L+VH +GLS H+A+VEVREKL+I EA WN A+N++CE GV+AEA  LSTCNRFE+Y+AA D  AA    T++L   SGLP SVLR+NLF+LSG+DA+WH+MRV+GGLDSL+VGEGQILSQV+QCY H +E+DG GGKV++R+LN+A+AAGKRVRSET I+KG+VSISSAAVE S++   +DL  PF ++R+A+VGAGKM+RLL+ H+AS+G++ +T++NR   R + L  +FP++++ V+LM+DLW V+   D+VYT+TSA   ++ +  ++A+GL  G   ++VDI+VPRNV  +   +  + AYNVD LK VV +NTAMR+++MLEAEDLL EE + F +W+ SL A+P + +LQE+A   R EELK+ ++KL+  NLSEKEL+ VERL++GIVNKLLHGPM+HLR TE +E     LK L A+F L
Sbjct:   35 PAVVATSSALAVAADLGEIRKRTREERLEAASKGLQVHCVGLSIHHASVEVREKLAIAEADWNAASNQICEDGVVAEAAVLSTCNRFEVYYAATDPRAAMAHVTSYLANRSGLPVSVLRQNLFMLSGDDAVWHVMRVAGGLDSLIVGEGQILSQVRQCYLHSVEDDGCGGKVLARLLNNALAAGKRVRSETAIAKGSVSISSAAVELSEMLSQQDLQLPFSEARLAVVGAGKMTRLLVTHLASRGLERITIVNRSLGRPQELQEQFPDVDIEVKLMEDLWDVVGRSDIVYTATSAVDYVIDEQKLEANGLVGGHPLMLVDIAVPRNVGDDCKVLPNVAAYNVDDLKAVVAKNTAMRQREMLEAEDLLREETDAFVTWRESLSAIPTINQLQERANAFREEELKRCTRKLSGANLSEKELEAVERLSRGIVNKLLHGPMAHLRKTESVEGKQATLKELSAMFRL 497          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|299116715|emb|CBN76275.1| (Glutamyl-tRNA Reductase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 518.079 bits (1333), Expect = 2.293e-174
Identity = 263/453 (58.06%), Postives = 336/453 (74.17%), Query Frame = 0
Query:  202 EKKEKEANKKKRK-ATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRL----MDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGK----VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            E KE +A KK R+ A S TPL VHVIGLSHHNA V+VRE+L++PEA+WN A+ KLC    I EA  LSTCNRFE+Y AA D++AA  +    L+ +SGL QS LR+NLF+LS EDA+WHL+RVS GLDSLVVGEGQILSQV+QCY HG E+DG  GKV++RMLN+AV+AGKR R+ET ISKGAVSISSAA EFS++R  KDLGK    S VAI+GAGKM+RLL++H+ S G+K V L+NR   +   L  EFP++E+ VRL      +L   +   D+++TSTSA GC++ K+ ++   L  GK    + VDISVPRNVE + S++ G+FAY+VD LK VV RNTA+R+++MLEAED+L EE  KF  WQ SL A PA+ K+QEK E MR +E++KA  KL NLS+KELQ VE+L++GIVNK+LHGPMS LR     ++    LK LK +F+L
Sbjct:  132 EAKETKAQKKARRIAASSTPLSVHVIGLSHHNAGVDVRERLAVPEAEWNLASAKLCGYENIREAAVLSTCNRFEVYVAATDAHAAIRDVMTHLQEYSGLSQSELRQNLFMLSREDAVWHLLRVSAGLDSLVVGEGQILSQVRQCYLHGTEKDGSAGKVVARMLNTAVSAGKRARAETSISKGAVSISSAAAEFSKMRAEKDLGKKLVGSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELMEEFPDIEMDVRLGAEDPTELERAIGEADIIFTSTSATGCIVGKEQLER--LEAGKERPVMFVDISVPRNVEADCSDVPGVFAYDVDDLKMVVARNTALRRREMLEAEDILSEEHNKFSGWQQSLSATPAISKMQEKFEGMRAQEMRKAGNKLPNLSDKELQVVEKLSQGIVNKMLHGPMSALRQPGGPDEKKQTLKILKDMFKL 582          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|1072231274|gb|OEU16007.1| (glutamyl-tRNA reductase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 514.998 bits (1325), Expect = 6.315e-174
Identity = 249/456 (54.61%), Postives = 343/456 (75.22%), Query Frame = 0
Query:  194 ADAIAAAAEKKEKEANKKKRKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGK--VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKL--NNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            +D +    E  +K+  +++R   +   L+VH +GLS H+A VEVREKL++PE  WN+A+N++C+ G IAEA  LSTCNRFEIY+AA D  AA    T FL   SGLP + LRKNLF+LSG+DA+WH+MRVSGGLDSL+VGEGQILSQV+QC+ H +EEDG GGKV+SR+LN+AVAAGKRVRSETGISKG+VS+SSAAVE S++    DL  PF ++R+A+VGAG M+RLL+ H+AS+G++ +T++NR   R E LA +FP++E+ ++LMDDLW V+   D+VYT+TS+   ++ +  + A+GL+ G+  ++VDISVPRN+  +   +     YNVD LK VV +NTAMR+++MLEAE LL EE   + +W+ SL A+P + +LQE+A + R +EL KA++KL   NL++KE++ VERL++GIVNKLLHGPM+HLR TE +E     LK L A+F L
Sbjct:   71 SDIVGELVEDLKKKKTREERLEAASKGLQVHCVGLSIHHADVEVREKLAVPECDWNKASNEICDGGDIAEAAVLSTCNRFEIYYAASDPRAAMASVTKFLADRSGLPVAELRKNLFMLSGDDAVWHIMRVSGGLDSLIVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETGISKGSVSVSSAAVELSEMLSLPDLNLPFSEARLAVVGAGTMTRLLITHLASRGLEKITIVNRSMARPEELAEQFPDVEIEIKLMDDLWDVIGRSDIVYTATSSVEYVIDEQKMMANGLSGGRPLMLVDISVPRNIGEDCKNVPNAKVYNVDDLKAVVAKNTAMRQREMLEAEILLKEEATSYFAWRESLSAIPTINQLQERANSFREQELAKATRKLANANLTDKEMEAVERLSRGIVNKLLHGPMAHLRKTESIEGKQQTLKELNAMFRL 526          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|1210526047|dbj|GAX14965.1| (glutamyl-tRNA reductase [Fistulifera solaris])

HSP 1 Score: 512.301 bits (1318), Expect = 3.140e-173
Identity = 254/477 (53.25%), Postives = 351/477 (73.58%), Query Frame = 0
Query:  173 VGPALKPLYAATVAAPTASIPADAIAAAAEKKEKEANKKKRKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGK--VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLN--NLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            V P      ++TV +P+  +   A       + K+  +++R   +   L+VHV+GLS H+A VEVREKL+IPEA+WN A+N++C +G + EA  LSTCNRFE+Y+AA D+ AA    T +L   SG+P S LR+NLF+LSG+DA+WH+MRV+GGLDSL+VGEGQILSQV+QC+ H +EEDG GGKV+SR+LN+AVAAGKRVRSET ISKG+VSISSAAVE S++   KDL  PF + R+A VGAGKM+RLL+ H+AS+G++ +T++NR  +R + L  +FP++++ ++LMDDLW V+   D+VYT+TS    ++ +  +  +GL  G+  ++VDISVPRNV    +EI  + AYNVD LK VV RNTAMR++++LEAE LL EE E F +W+ +L  +P + +LQE+A   R EELKK +++L+  NLS+KEL+ VERL++GIVNKLLHGPM+HLR TE +E     LK L A+F L
Sbjct:   21 VAPLPSAALSSTVISPSPQLSMIATGEMINGETKKKTREERLEAATKGLQVHVVGLSIHHAEVEVREKLAIPEAEWNAASNEICANGKVNEAAVLSTCNRFEVYYAATDARAAMAHVTQYLSERSGIPVSALRRNLFMLSGDDAVWHIMRVAGGLDSLIVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETAISKGSVSISSAAVELSEMLSMKDLKLPFSECRLAAVGAGKMTRLLITHLASRGLEKITIVNRSLDRPKELQEQFPDIDIEIKLMDDLWDVVGRSDIVYTATSCVDYVIDEQKLDVNGLVGGRPLMLVDISVPRNVNENCNEIPNVKAYNVDDLKAVVARNTAMRQREILEAEKLLQEEAESFIAWREALSTIPTIYQLQERANEFRQEELKKCTRRLSSANLSDKELEAVERLSRGIVNKLLHGPMAHLRKTESIEGKQATLKELSAMFML 497          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|224000703|ref|XP_002290024.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975232|gb|EED93561.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 509.22 bits (1310), Expect = 8.657e-172
Identity = 260/519 (50.10%), Postives = 360/519 (69.36%), Query Frame = 0
Query:  148 FRTSMGLFVAPTTGHTAH----SLSRRRR------------VGPALKPLYAATVAAPTASIPADAIAAAAEKKEKEANKKKRKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGK--VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKL---NNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
             + S  LF+A T G TA     SLSR  R            VG       +A  AA       D   A      ++  K++R   +   L+VHVIGLS H+A VEVREKL+IPEA+WNE +N +C +G + EA  LSTCNRFEIYFAA D++ A      +L   SGLP SVLR+N+F+L G+DA+WHLMRV+GGLDSLVVGEGQILSQV+QC+ H +EEDG GGKV+SR+LN+AVAAGKRVRSET ISKG+VSISSAAVE S+  C +DL  PF ++R+A+VGAG M+RLL+ H+AS+G++ + ++NR  +R + L  +FP++++ + L+D LW V+   D+VYT+TS+   ++ ++ ++ +G   G+  ++VDI+VPRNV     +I+G+  YNVD LK VV +NTAMR+++M+EAE+LL EE + F  W+ SL A+P + +LQE+A   R EELKK ++KL   +N +++EL+ VERL++GIVNK+LHGPM+HLR  E +E    ALK L ++F L
Sbjct:    1 MKLSTALFLATTVGVTAAFQSPSLSRTVRSINNTNQQKKSNVGGGSVKSSSAMWAATMDGTANDVDVAGGVAGRRKKTKQERLELASKGLQVHVIGLSIHHAQVEVREKLAIPEAEWNEQSNIICSTGQVEEAAILSTCNRFEIYFAASDAHEANARVMEYLAERSGLPVSVLRRNIFMLEGDDAVWHLMRVAGGLDSLVVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETNISKGSVSISSAAVELSEHMCMQDLNLPFSEARLAVVGAGTMTRLLVTHLASRGLERIAIVNRSMQRPQELQEQFPDVDIEIALVDQLWDVVGKSDIVYTATSSTDYVIDENLLEQNGQTGGRPLMLVDIAVPRNVGPGSGKIDGVVPYNVDDLKAVVAKNTAMRQREMIEAENLLREESDSFIGWRESLSAIPTINQLQERANMFRQEELKKCTRKLSQNDNFTDRELEAVERLSRGIVNKMLHGPMAHLRRAESVEGKQAALKELSSMFRL 519          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|1210517499|dbj|GAX23756.1| (glutamyl-tRNA reductase [Fistulifera solaris])

HSP 1 Score: 507.679 bits (1306), Expect = 1.823e-171
Identity = 258/484 (53.31%), Postives = 352/484 (72.73%), Query Frame = 0
Query:  176 ALKPLYAATVAAPTASIPADA-------IAAAAEKKEKEANKKKRKA---TSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGK--VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLN--NLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            A+ P+ A     P+ +I + A       + A  E    E  KK R+     +   L+VHV+GLS H+A VEVREKL+IPEA+WN A+N++C +G + EA  LSTCNRFE+Y+AA D+ AA    T +L   SG+P S LR+NLF+LSG+DA+WH+MRV+GGLDSL+VGEGQILSQV+QC+ H +EEDG GGKV+SR+LN+AVAAGKRVRSET ISKG+VSISSAAVE S++   KDL  PF + R+A VGAGKM+RLL+ H+AS+G++ +T++NR  +R + L  +FP++++ ++LMDDLW V+   D+VYT+TS    ++ +  +  +GL  G+  ++VDISVPRNV    +EI  + AYNVD LK VV RNTAMR++++LEAE LL EE E F +W+ +L  +P + +LQE+A   R EELKK +++L+  NLS+KEL+ VERL++GIVNKLLHGPM+HLR TE +E     LK L A+F L
Sbjct:   13 AIAPVSAFVAPLPSVAITSTASPLQQLSMIATGEMINGETKKKTREERLEAATKGLQVHVVGLSIHHAEVEVREKLAIPEAEWNAASNEICANGKVNEAAVLSTCNRFEVYYAATDARAAMAHVTQYLSERSGIPVSSLRRNLFMLSGDDAVWHIMRVAGGLDSLIVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETAISKGSVSISSAAVELSEMLSMKDLKLPFSECRLAAVGAGKMTRLLITHLASRGLEKITIVNRSLDRPKELQEQFPDIDIEIKLMDDLWDVVGRSDIVYTATSCVDYVIDEHKLDVNGLVGGRPLMLVDISVPRNVNENCNEIPNVKAYNVDDLKAVVARNTAMRQREILEAEKLLQEEAESFIAWREALSTIPTIYQLQERANEFRQEELKKCTRRLSNANLSDKELEAVERLSRGIVNKLLHGPMAHLRKTESIEGKQATLKELSAMFML 496          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|397575110|gb|EJK49539.1| (hypothetical protein THAOC_31577 [Thalassiosira oceanica])

HSP 1 Score: 501.516 bits (1290), Expect = 5.870e-169
Identity = 250/496 (50.40%), Postives = 352/496 (70.97%), Query Frame = 0
Query:  155 FVAPTTGHTAHSLSRRRRVGPALKPLYAATVAAPTASIPADAIAAAAEKKEKEANKKKRKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGKVI--VDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKL---NNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            F +P     A S SR R    +   L AAT+     ++P           +++  K++R   +   L+VHVIGLS H+A VEVREKL+IPEA+WN  +N +C +G + EA  LSTCNRFEIYFAA +++ A      +L   SGLP SVLR+N+F+L G+DA+WHLMRVSGGLDSLVVGEGQILSQV+QC+ H +E+DG GGKV+SR+LN+AVAAGKRVRSET ISKG+VSISSAAVE S+  C +DL  PF ++R+A++GAG M+RLL+ H+AS+G++ ++++NR   R + L  +FP++++ + L D LW V+   D+V+T+TS+   ++ K  ++A+ L  G+ I  VDI+VPRN+  + SE+  +  YNVD LK VV +NTAMR+++M+EAE+LL++E   F  W+ SL A+P + +LQE+A   R EELKK ++KL   +N S++EL+ VERL++GIVNK+LHGPM+HLR  E +EK   AL  L ++F L
Sbjct:   20 FQSPVAPSKAVS-SRGRNTVVSGSALLAATLDGTAVNVPTGV--------KRKKTKQERLELASKGLQVHVIGLSIHHAQVEVREKLAIPEAEWNTQSNLICSTGQVEEAAILSTCNRFEIYFAASNAHEANARVMEYLAERSGLPVSVLRRNIFMLEGDDAVWHLMRVSGGLDSLVVGEGQILSQVRQCHLHSIEDDGCGGKVLSRLLNNAVAAGKRVRSETNISKGSVSISSAAVELSEAMCMQDLNLPFSEARLAVIGAGTMTRLLITHLASRGLERISIVNRSMARPKELQEQFPDVDIEIVLEDGLWDVVGRSDIVFTATSSPDYVIDKQLLEANNLNSGRAIMLVDIAVPRNIGPDCSELPAVTPYNVDDLKAVVAKNTAMRQREMIEAENLLLDEKNSFVGWRESLSAIPTINQLQERANMFRQEELKKCTRKLSQNDNFSDRELEAVERLSRGIVNKMLHGPMAHLRRAESVEKKQAALSELSSMFRL 506          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|546296455|ref|XP_005709872.1| (glutamyl-tRNA reductase [Chondrus crispus] >gi|507105877|emb|CDF39578.1| glutamyl-tRNA reductase [Chondrus crispus])

HSP 1 Score: 467.233 bits (1201), Expect = 5.451e-157
Identity = 224/422 (53.08%), Postives = 310/422 (73.46%), Query Frame = 0
Query:  226 IGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGK--VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            +GLSHH A V+VRE+L++PEA+W  AA +LCE   I+EA  LSTCNRFE+Y  A   + A  E  A L   SGL  + LRK+LF+L+ ++A WHLMRVS GLDSLV+GEGQILSQVK+CY    + DG  GK++ R+LN+AV+AGKRVRSETGI+KGAVSISSAAVE ++++   DL  P +D++V I+GAGKMSRLL+ H+ S+GV  +T++NR   RAE LA  FP+  + ++L+D +   + T D+++TST+A   +LTKD +    L P +  +++DISVPRNV  +V+EI+ MF+YNVD LK VV +N A R++ MLEAEDLL EE+  F +W  SLG +PA+ KLQ++AE++R +E+ +   KL++LS  EL+ VE+L+KGI+NK+LH PM HLR   DLE+    LK ++A+F+L
Sbjct:    1 MGLSHHTATVDVRERLAVPEAEWQIAAERLCECAAISEAAVLSTCNRFEVYIVADHPFKAIQEVVAHLSSRSGLSVTELRKHLFMLTEDEASWHLMRVSAGLDSLVIGEGQILSQVKKCYELASDADGHAGKILQRLLNNAVSAGKRVRSETGIAKGAVSISSAAVELAEMKAVPDLDLPLKDAKVCILGAGKMSRLLVQHLLSRGVADITIVNRSIGRAEELAKMFPDASLHIKLLDSMIESVATSDIIFTSTAASAPILTKDML-TPALDPLRRSIVIDISVPRNVSDDVAEIDNMFSYNVDDLKAVVAKNQARRRRLMLEAEDLLREELATFNNWHNSLGCIPAISKLQQRAESIRQDEMDRVKGKLSDLSASELKAVEQLSKGIINKMLHSPMVHLRGLADLEERTQTLKNIEALFKL 421          
BLAST of EWM27669.1 vs. NCBI_GenBank
Match: gi|922864814|gb|KOO31991.1| (glutamyl-tRNA reductase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 467.618 bits (1202), Expect = 1.608e-155
Identity = 242/440 (55.00%), Postives = 311/440 (70.68%), Query Frame = 0
Query:  219 TPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCESGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGM----EED---GKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLMDDLWPVMHTHDVVYTSTSAQGCLLTKDNIQASGLAPGK-----VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKK-LNNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 645
            TP+   V+GLSH  A VEVREKLSI EAQWN A+  LC+   I EA  LSTCNRFE+Y  A D + A  +A AFL  HSGL    LR NLF+L  EDA WHL+RV+ GLDSLVVGEGQILSQVK CY H M    EE+   G GGKV+ R+LNSAV AGK VRSET I+KGAVSISSAAVE + L+   DLGKP  + R+A+VGAGKMS+LLM H+AS GV  +TL+NR R RAE +AAE+P+M+V+V+LMD+ WP +   D+ +TSTS+ GC++TK  ++A            +++DISVPRNVE + +++  + AYNVD LK+VV  N A R+ +MLEAE LL  E+ KF  WQ SL  VPA+  LQ+K E +R  E+ KA KK L +L +KE Q V+ +TKGI+NKLLHGPMS+LR ++D +    +++ ++ +F L
Sbjct:   81 TPI---VLGLSHKTATVEVREKLSISEAQWNAASAALCKYDSIQEAAVLSTCNRFEVYIVATDPFTATRDAMAFLREHSGLDDRQLRPNLFVLQNEDATWHLLRVASGLDSLVVGEGQILSQVKACYGHAMQPPSEEEPVGGSGGKVLGRLLNSAVMAGKFVRSETEIAKGAVSISSAAVELAILKSIVDLGKPLAELRIAVVGAGKMSKLLMTHLASHGVTKLTLLNRSRPRAEEMAAEYPDMDVSVKLMDEFWPSLENTDLAFTSTSSTGCIVTKAELEAGVWGADSARDKLMLIDISVPRNVEAQCNDLPNVIAYNVDDLKQVVAANQAKRRHKMLEAELLLRVELAKFVQWQESLRYVPAIAALQKKYEAVRESEMAKAQKKALKDLGDKERQAVDVVTKGIINKLLHGPMSYLR-SDDNDGTKASVQQIEQIFML 516          
The following BLAST results are available for this feature:
BLAST of EWM27669.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109940|gb|EWM27669.1|0.000e+0100.00glutamyl-trna reductase [Nannochloropsis gaditana][more]
gi|219112067|ref|XP_002177785.1|1.320e-17754.86glutamyl-trna reductase [Phaeodactylum tricornutum... [more]
gi|299116715|emb|CBN76275.1|2.293e-17458.06Glutamyl-tRNA Reductase, chloroplast precursor [Ec... [more]
gi|1072231274|gb|OEU16007.1|6.315e-17454.61glutamyl-tRNA reductase [Fragilariopsis cylindrus ... [more]
gi|1210526047|dbj|GAX14965.1|3.140e-17353.25glutamyl-tRNA reductase [Fistulifera solaris][more]
gi|224000703|ref|XP_002290024.1|8.657e-17250.10predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210517499|dbj|GAX23756.1|1.823e-17153.31glutamyl-tRNA reductase [Fistulifera solaris][more]
gi|397575110|gb|EJK49539.1|5.870e-16950.40hypothetical protein THAOC_31577 [Thalassiosira oc... [more]
gi|546296455|ref|XP_005709872.1|5.451e-15753.08glutamyl-tRNA reductase [Chondrus crispus] >gi|507... [more]
gi|922864814|gb|KOO31991.1|1.608e-15555.00glutamyl-tRNA reductase [Chrysochromulina sp. CCMP... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3018rna3018Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications