EWM30413.1, cds301 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|585113073|gb|EWM30413.1| (Tetratricopeptide TPR2 [Nannochloropsis gaditana]) HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 Query: 1 MKGGTGPLILVALFSSLAYCINLSKCFIRISNRTRPFRETIRTTTSQHARAESVVAYHSSKMQLSLSWFSGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKWI 264 MKGGTGPLILVALFSSLAYCINLSKCFIRISNRTRPFRETIRTTTSQHARAESVVAYHSSKMQLSLSWFSGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKWI Sbjct: 1 MKGGTGPLILVALFSSLAYCINLSKCFIRISNRTRPFRETIRTTTSQHARAESVVAYHSSKMQLSLSWFSGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKWI 264
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|923791695|ref|XP_013684496.1| (PREDICTED: uncharacterized protein LOC106388868 [Brassica napus] >gi|674865017|emb|CDY67876.1| BnaAnng25460D [Brassica napus]) HSP 1 Score: 197.208 bits (500), Expect = 4.846e-59 Identity = 103/219 (47.03%), Postives = 136/219 (62.10%), Query Frame = 0 Query: 45 TSQHARAESVVAYHSSKMQLSLSWFSGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263 T QHA A S + S + + G +E + GM+LFR+GDV GS+ FD+A++L Q + YLWQRGLSLYY R+ EGAEQFR DVA NP DTEE+IW FLCEA++ G + AR++ L V D RP MR AY LFK E L + ++ + FYA LY GLY EA +++KA+ +I A+ +PYG + DYMA LA+VH + R W Sbjct: 38 TPQHAHALSRRLFLPSVSSIWDAITGGGDSNPREAIAAIRNGMQLFRQGDVSGSVTEFDKAIVLDSRQ-KAYLWQRGLSLYYMDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEARLHGVDVARKQFLEVGRDSRPVMREAYNLFKNGGDPEKLVNDFSSGQASEVFYASLYAGLYYEAEGKSEKAKFHITAACGSPYGQRSDDYMASLAKVHCLCRNW 255
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|1191671439|gb|OTG23405.1| (putative tetratricopeptide repeat (TPR)-like superfamily protein [Helianthus annuus]) HSP 1 Score: 197.978 bits (502), Expect = 9.644e-59 Identity = 101/194 (52.06%), Postives = 128/194 (65.98%), Query Frame = 0 Query: 70 SGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263 +G ++ S++ + + GM LFR+GDV GS+ FD A+ L Q + YLWQRGLSLYY R+ EGAEQFR DVA NP DTEE+IW FLCEAQ+ G EAR+K L V DPRP MR AY +F+ E L + FYA LY GLY E+++EADKA+ +I AS +PYG + DYMA LA+VH + R W Sbjct: 104 TGGADSSRQALIAIRRGMVLFRQGDVAGSVAEFDNAMKLDPRQ-KAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPNDTEESIWCFLCEAQLYGAAEARKKFLEVGRDPRPVMRDAYNMFRDGGDPEKLVDAFSKGRESEYFYASLYAGLYYESQNEADKAKVHIVASCKSPYGQRSDDYMASLAKVHCLCRNW 296
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|902193012|gb|KNA12179.1| (hypothetical protein SOVF_127800 [Spinacia oleracea]) HSP 1 Score: 196.438 bits (498), Expect = 1.333e-58 Identity = 98/193 (50.78%), Postives = 128/193 (66.32%), Query Frame = 0 Query: 71 GRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263 G + +E + + GM+LFR+GD+ GS+ FD+A+ L Q + YLWQRGLSLYY R+ EGAEQFR DVA NP DTEE+IW FLCEA + G +EAR++ L+V DPRP MR+AYE+F+ + LA ++ FYA LY GLY EA E + A+NYI A+ +PY + DYMA LA+VH I R W Sbjct: 73 GSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQ-KAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPRPVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQSPYAQRSDDYMASLAKVHCICRNW 264
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|976927230|gb|KVI11023.1| (Tetratricopeptide-like helical, partial [Cynara cardunculus var. scolymus]) HSP 1 Score: 197.208 bits (500), Expect = 1.638e-58 Identity = 102/194 (52.58%), Postives = 127/194 (65.46%), Query Frame = 0 Query: 70 SGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263 +G S+E + + GM LFR+GDV GS+ FD A+ L Q + YLWQRGLSLYY R+ EGAEQFR DVA NP DTEE+IW FLCEAQ+ G EAR++ L V DPRP MR AY +FK E L + + FYA LY GLY E+++EADKA+ ++ AS +PYG + DYMA LA+VH RKW Sbjct: 101 TGGGGSSREALIAIRRGMVLFRQGDVSGSVAEFDNAIKLDSRQ-KAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPNDTEESIWCFLCEAQLYGATEARKRFLEVGRDPRPVMREAYNMFKDGGDPEKLVAVFSEGRASEYFYASLYAGLYYESQNEADKAKVHLVASCQSPYGLRSDDYMASLAKVHCACRKW 293
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|1028941003|ref|XP_016713707.1| (PREDICTED: uncharacterized protein LOC107927189 [Gossypium hirsutum]) HSP 1 Score: 195.282 bits (495), Expect = 3.179e-58 Identity = 110/243 (45.27%), Postives = 143/243 (58.85%), Query Frame = 0 Query: 27 FIRISNRTRPFRETIRTTTSQHARAESVVAYHSSKMQLSLSWFSG------RSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263 F I +T+PF T R Q+ ++ S+ L SG + K+ + + GM LFR GDV GS++ FD+A+ L Q + YLWQRGLSLYY R+ E AEQFR DVA NP DTEE+IW FLCEAQ+ G +EAR++ L V DPRP MR AY LFK E L N P FYA LY GLY E++ +AD A+ +I ++ +PYG+ + DYMA LA+VH + R W Sbjct: 28 FFSIKTQTKPFSFTTRIHNLQYPS----LSLTFSRRFFILPSVSGIWDALTGNNNPKDAVIAIRRGMLLFREGDVPGSVVEFDKAIELDPRQ-KAYLWQRGLSLYYLDRFEEAAEQFRIDVAENPNDTEESIWCFLCEAQLYGVDEARQRFLEVGRDPRPVMREAYNLFKDGGDPEKLVAAFTN--GPQYFYASLYAGLYYESQKKADAAKVHILSACNSPYGHRSDDYMASLAKVHCLCRNW 263
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|1026767933|gb|OAE28161.1| (hypothetical protein AXG93_638s1510 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 195.667 bits (496), Expect = 5.478e-58 Identity = 99/195 (50.77%), Postives = 129/195 (66.15%), Query Frame = 0 Query: 69 FSGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263 GR S++ ++ GM+LF +G V+ S+ FDEA+ L Q PYLWQRGLSLYY R+ +GA QFR+DVAVNP DTEEAIW FLCEA++ G EEARRK L+V TD RP MR+ YE+F+ E++ + ++ FYA LY GLY E D D AR + A+V +PYG+ + DYMA LA+VH + R W Sbjct: 95 MGGRERPSQQAILVTRRGMQLFEQGKVKESVEKFDEAMELDPRQ-RPYLWQRGLSLYYLDRFEDGAAQFREDVAVNPNDTEEAIWTFLCEAKLYGAEEARRKFLMVGTDSRPVMRKIYEVFRDGRPVEEILQSVSSTGGADFFYASLYTGLYHEVYDNTDAAREAMVAAVRSPYGSRSGDYMATLAKVHCLCRNW 288
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|1035914410|gb|OAY44003.1| (hypothetical protein MANES_08G114800 [Manihot esculenta]) HSP 1 Score: 194.897 bits (494), Expect = 5.829e-58 Identity = 115/273 (42.12%), Postives = 154/273 (56.41%), Query Frame = 0 Query: 6 GPLILVALFSSLAYCINLSKCFIRISNRTRPFRETIRTTTSQHARAESVVAYHSSKMQLSLSWFSGR---------------SEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263 P L SS +YC + + ++ T P+ +RT T + R S + +Q L +FS R ++E V + GM LFR+GDV GS+ FD+A+ L Q + YLWQRGLSLYY R+ EGAEQFR DVA NP DTEE+IW FLCEAQ+ G +EAR++ L V DPRP MR AY +FK E L +N FYA LY GLY E++++ D A+ +I A+ +PYG + DYMA L++VH + R W Sbjct: 6 NPKPTTILISSASYCSSPA------TSLTLPY--PLRTNT--NPRLFSTIPSSIHNLQHPLPFFSRRLFLPAVSGIWDALTGGNNAREAIVAIRRGMVLFRQGDVLGSLAEFDKAIELDPRQ-KAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARKRFLEVGRDPRPVMRDAYNMFKDRGDPEKLVTAFSNGPENEYFYASLYAGLYHESQNKPDAAKFHIVAACRSPYGQRSDDYMAALSKVHCLCRNW 267
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|1150130975|ref|XP_020240219.1| (uncharacterized protein LOC109819039 isoform X2 [Cajanus cajan]) HSP 1 Score: 194.126 bits (492), Expect = 7.332e-58 Identity = 97/195 (49.74%), Postives = 129/195 (66.15%), Query Frame = 0 Query: 70 SGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKWI 264 +G + ++E + + GM LFR+GDV GS+ FD+A+ L Q + YLWQRGLSLYY R+ EGAEQFR DVA NP DTEE+IW FLCEAQ+ G +EAR++ L V TDPRP MR AY +FK E L + FYA LY GLY E++++AD A+ +I A+ + YG + DYMA L++VH + R W+ Sbjct: 62 TGGNNNAREAVLAIRRGMSLFRQGDVSGSVEEFDKAIQLDPRQ-KAYLWQRGLSLYYLNRFDEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARKRYLEVGTDPRPVMREAYNMFKDGGDPEKLVAAFSGSREGEYFYASLYAGLYYESQNQADAAKVHIVAACQSSYGQRSDDYMASLSKVHCLCRNWV 255
BLAST of EWM30413.1 vs. NCBI_GenBank
Match: gi|1044553082|ref|XP_017412539.1| (PREDICTED: uncharacterized protein LOC108324191 isoform X2 [Vigna angularis] >gi|965608598|dbj|BAT95089.1| hypothetical protein VIGAN_08175300 [Vigna angularis var. angularis]) HSP 1 Score: 194.126 bits (492), Expect = 9.007e-58 Identity = 111/257 (43.19%), Postives = 148/257 (57.59%), Query Frame = 0 Query: 27 FIRISNRTRPFRETIRTTTSQHARAESVVAYHSSKMQLSLS-----------------W--FSGRSEKSKEPRVLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDGFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKEGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKWI 264 F+ IS+ +P +I + S H + S SSK SL+ W +G S ++E + + GM LFR+GDV GS++ FD+A+ L Q + YLWQRGLSLYY R+ EGAEQFR DVA NP DTEE+IW FLCEAQ+ G +EAR++ L V DPRP MR AY +FK E L + FYA LY GLY E+++E D A+ +I A+ + YG + DYMA L++VH R W+ Sbjct: 4 FMSISHNLKP---SILVSPSLH-HSSSFPILLSSKQPFSLTHPLNLTRRLFLPSVSGIWDALTGASNNAREAVLAIRRGMSLFRQGDVSGSLVEFDKAIQLDPRQ-KAYLWQRGLSLYYLNRFEEGAEQFRFDVAQNPNDTEESIWCFLCEAQLYGVDEARKRFLEVGIDPRPVMREAYNMFKDGGDPEKLVAAFSGGRDSEYFYASLYAGLYYESQNEIDAAKVHIVAACQSSYGQRSDDYMAALSKVHCQCRNWV 255 The following BLAST results are available for this feature:
BLAST of EWM30413.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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