EWM27695.1, cds2993 (CDS) Nannochloropsis gaditana

Overview
NameEWM27695.1
Unique Namecds2993
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:449409..449443 +
Alignment locationCM002460.1:449504..449685 +
Alignment locationCM002460.1:449791..449811 +
Alignment locationCM002460.1:449923..450059 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27695.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100104g25.5958.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:449409..449443 +
CM002460.1supercontigCM002460.1:449504..449685 +
CM002460.1supercontigCM002460.1:449791..449811 +
CM002460.1supercontigCM002460.1:449923..450059 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27695.1 vs. NCBI_GenBank
Match: gi|585109967|gb|EWM27695.1| (hypothetical protein Naga_100104g25 [Nannochloropsis gaditana])

HSP 1 Score: 253.447 bits (646), Expect = 2.325e-85
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 
Query:    1 MSVIGTALGASVEKCEIKSQPVTTHLKKVHSRGREGKGARRGRIYRGKFPLYCGEDVLIRARGGPPLHQHTQGRSFTLRIEENYNGRVKFILVRDKDGIYIESRTRYVCTFHEGSEGYMKATGG 124
            MSVIGTALGASVEKCEIKSQPVTTHLKKVHSRGREGKGARRGRIYRGKFPLYCGEDVLIRARGGPPLHQHTQGRSFTLRIEENYNGRVKFILVRDKDGIYIESRTRYVCTFHEGSEGYMKATGG
Sbjct:    1 MSVIGTALGASVEKCEIKSQPVTTHLKKVHSRGREGKGARRGRIYRGKFPLYCGEDVLIRARGGPPLHQHTQGRSFTLRIEENYNGRVKFILVRDKDGIYIESRTRYVCTFHEGSEGYMKATGG 124
The following BLAST results are available for this feature:
BLAST of EWM27695.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109967|gb|EWM27695.1|2.325e-85100.00hypothetical protein Naga_100104g25 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3001rna3001Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications