EWM27696.1, cds2985 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|585109968|gb|EWM27696.1| (mitochondrial inner membrane protein oxa1l [Nannochloropsis gaditana]) HSP 1 Score: 852.818 bits (2202), Expect = 0.000e+0 Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0 Query: 1 MTTPLRLCRNLARRTMSWRYNAGEICLRGASLRAGAGAYSGRGLGPILPKSLDSARRGFSASPSPPPTGTPSDLAPVSQIPQIDPTTWHAWVFDSIPVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTVPKERLQSGGAAKEGPASGHTVSTPAGSEADAGVFVEKRIFLKALQALDAYESRRKARLKQTKSDGEELKKQEGSRKEKSPELSIRPVSKSRN 423 MTTPLRLCRNLARRTMSWRYNAGEICLRGASLRAGAGAYSGRGLGPILPKSLDSARRGFSASPSPPPTGTPSDLAPVSQIPQIDPTTWHAWVFDSIPVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTVPKERLQSGGAAKEGPASGHTVSTPAGSEADAGVFVEKRIFLKALQALDAYESRRKARLKQTKSDGEELKKQEGSRKEKSPELSIRPVSKSRN Sbjct: 1 MTTPLRLCRNLARRTMSWRYNAGEICLRGASLRAGAGAYSGRGLGPILPKSLDSARRGFSASPSPPPTGTPSDLAPVSQIPQIDPTTWHAWVFDSIPVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTVPKERLQSGGAAKEGPASGHTVSTPAGSEADAGVFVEKRIFLKALQALDAYESRRKARLKQTKSDGEELKKQEGSRKEKSPELSIRPVSKSRN 423
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|553195489|ref|XP_005856156.1| (mitochondrial inner membrane oxa1l-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292903|gb|EKU20204.1| mitochondrial inner membrane oxa1l-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 238.039 bits (606), Expect = 1.045e-74 Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 Query: 191 LHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSV 308 +HQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSV Sbjct: 1 MHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSV 118
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|1173954017|gb|OQS01516.1| (Cytochrome Oxidase Biogenesis (Oxa1) Family [Achlya hypogyna]) HSP 1 Score: 146.362 bits (368), Expect = 5.311e-37 Identity = 93/276 (33.70%), Postives = 139/276 (50.36%), Query Frame = 0 Query: 58 GFSASPSPPPTGTPSDLAPVSQIPQIDPTTWHAWVFDSIPVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQI-ILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTVP 332 FS +P P G+ D+ +++I P W+ V + Q ++E H TGLPWWA+ S + R +L P++ YQ A+ R+A A+ V + ++ + G + + G + + H S L I++P+VQ+P F A + R ++ VPGL+ GG F +LTEADP +LP L + STYLN EL + S+I +L +LK LQ ++ P LP GVF YW SS + AQ L+ P VR LG +P Sbjct: 23 AFSTTPVNLPEGSGVDVQALTEIMGGGPAVEPLWI-----VHAAQNVIETVHATTGLPWWATFAASAVVVRGSLFPLLVYQIKAIERMAEASKDVKTVWKSYLYARLFLPPGLPSSQIDALKQLQKGASLSFEKHNTSPLQCISAPVVQIPSFFLMAYSCRGLVRSGVPGLDIGGFGPFLNLTEADPTFVLPALAVASTYLNFEL----MGSSKIKLLDWLKGKLQYIPLISFPFVCQLPQGVFFYWLASSWFSLAQSRLLKVPAVRARLGLKQLP 289
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|1183482219|gb|ORZ06012.1| (60Kd inner membrane protein-domain-containing protein [Absidia repens]) HSP 1 Score: 142.51 bits (358), Expect = 1.888e-35 Identity = 81/247 (32.79%), Postives = 132/247 (53.44%), Query Frame = 0 Query: 97 PVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLP-VVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGF---ARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTV--PKERLQ 337 PV ++ +LE H GLPWW SI L+T+ R ALLP +++ Q + ARL + +N +++ ++ ++ G Y+ + K + + ++ P++Q+PV ++F +A R M D VPG+ EGG++WF +LT DP ILP + LE G A +S+ + F++ +L P ++ +P+GVF+YW TS++Y AQ AL+NP VR L P + P + LQ Sbjct: 33 PVGGLEAMLEAVHVTMGLPWWGSIALATVIVRTALLPLIIKLQGNN-ARL-------MNINPEVTRIMNNLKTAQAEGDAVATGKYSHEISDLFKKNNCHPMKSLGLPLIQMPVMISFFMALRAMADLPVPGMAEGGMSWFTNLTAQDPYYILPAVSAAGMLAVLEAGTEAGAATPQSKGMKTFMRG----ITVLTVPFTAWMPSGVFVYWITSNIYSIAQILALKNPSVRSALNIPQLIKPAKELQ 267
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|1173927265|gb|OQR81304.1| (Cytochrome Oxidase Biogenesis (Oxa1) Family, partial [Thraustotheca clavata]) HSP 1 Score: 139.043 bits (349), Expect = 1.294e-34 Identity = 88/238 (36.97%), Postives = 124/238 (52.10%), Query Frame = 0 Query: 98 VRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAP-LVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQ-QVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQI-ILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTVP 332 V + Q ++E H TGLPWWA+ + + R +L P++ YQ + R+A A+ L L RL + G + + G + + H + IA+P+VQ+P F A + R MI VPGL+ GG F++L EAD ILP+L +GSTYLN EL + S+I + +LK+ +Q IL P LP GVF YW SS Y AQ AL+ P+VR LG +P Sbjct: 10 VNAAQNVIEAVHTTTGLPWWATFACTAIVVRGSLFPLLVYQIKSTERMAVASKDLRKVWKTYLYARL-FLPPGLPSSQIDALKLLKDGAQLTWEKHNTHPVQCIATPLVQIPSFFLMAYSCRDMIRSGVVPGLDSGGFGMFQNLMEADSTFILPILAVGSTYLNFEL----MGSSKIKVFDWLKNKIQYIPILSFPFICQLPQGVFFYWLASSWYSLAQSRALKVPEVRKRLGLKEIP 242
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|1021057451|emb|SAM06360.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 140.584 bits (353), Expect = 3.654e-34 Identity = 86/288 (29.86%), Postives = 143/288 (49.65%), Query Frame = 0 Query: 64 SPPPTGTPSDLAPVSQIPQIDPTTWHA---------WVFDSIPVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGF---ARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTV--PKERLQ 337 SPP S L ++Q P + A + + PV ++ +LE H GLPWWASI +T+ R+ALLP++ +L R ++ +N +++ ++ ++ G Y+ + K ++ + ++ P+VQ+PV ++F +A R M + VPG+ EGG++WF DL DP ILP + LE G A +S+ + F++ +L P ++ +P+GVFIYW TS+ + AQ AL++P VR L P + P + LQ Sbjct: 60 SPPTINDTSSLETLAQTPAAESVIGAAAQIGDFKAMGLCNFTPVGGLEAMLEAVHVTMGLPWWASIAAATVIVRMALLPLI-------VKLQRNNARLMNINPEVTRIMNNLKTAQADGDAVATGKYSHEISDLFKKNKCHPMKSLGLPLVQMPVMISFFMALRAMAELPVPGMTEGGMSWFTDLAAKDPYYILPAVSAAGMLAVLEAGTEAGAATPQSKGMKNFMRG----VTVLTVPFTAWMPSGVFIYWITSNAFSIAQILALKSPSVRSALDIPQLVKPAKELQ 336
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|1069859087|ref|XP_018226730.1| (hypothetical protein T552_00950 [Pneumocystis carinii B80] >gi|968585063|gb|KTW29743.1| hypothetical protein T552_00950 [Pneumocystis carinii B80]) HSP 1 Score: 141.739 bits (356), Expect = 4.678e-34 Identity = 101/324 (31.17%), Postives = 152/324 (46.91%), Query Frame = 0 Query: 97 PVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSST-LPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTVPKERLQSGGAAKEGPASGHTVSTPAGSEADAGVF-----VEKRIFLKALQA---------LDAYESRRKARLKQTKSDGEELKKQEGS 405 PV +Q LE + TGLPWWASI T+ R ++P++ L+ LA P V +AL + GD T Q ++ K ++V+ L ++A P +Q+PVF++F LA RM VPGL+ GG+ WF DL+ +DP ILP L ++NLELG + NL +IL P+ + + VF YW TS+++ Q F LR+ VR L P + K + QS + + G + A E K ++ + Q+ L+AY R+K + KQ + + E K+ E S Sbjct: 130 PVGFLQQCLEYIYVFTGLPWWASIATLTVIIRFCMVPLLIGMIRNLSTLALIHPEVQNHMKALK---EAQLEGDIIEQTKRTQ----SIQKLFKEYKVNPLKSLAMPFIQMPVFISFYLACSRMASLPVPGLKNGGLGWFNDLSASDPYFILPFLNSSLMFINLELGSEVGSSASTNANMKMRNLFRMIILLTPLFTIKFQSAVFCYWITSNIFSLGQGFMLRHSSVRHFLNLPPL-KPKTQSDKSDNSKDSEGFKSNFIAMVEGIKNTHRQVLETSKNVYKTSNQSNKHRPVDKTLEAYMLRKKIKYKQKQENKE--KQHETS 443
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|698802366|ref|XP_009834212.1| (hypothetical protein H257_09631 [Aphanomyces astaci] >gi|574110589|gb|ETV76087.1| hypothetical protein H257_09631 [Aphanomyces astaci]) HSP 1 Score: 138.658 bits (348), Expect = 5.507e-34 Identity = 99/279 (35.48%), Postives = 139/279 (49.82%), Query Frame = 0 Query: 80 IPQIDPTTWHAWVFDSIPVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRA-LSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQ-QVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQI-ILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTVPKERLQSGGAAKEGPASGHTVSTP 355 +P DP WV V + Q L+E H TGLPWWA+ + +A R L P++ YQ A R+A AA + +A L R+ A A Y GV+ + H + +A+P+VQ+P F+ A + R ++ +V GL+ GGV F++L EAD ILP L +G TYLN EL + S+I +L+ LK+ Q +L P +P G+F YW SS AQ ALR P +R LG VP +A++ PA STP Sbjct: 52 VPVDDP-----WVL----VDAAQRLIEAVHVTTGLPWWATFGATAIAVRGTLFPLMVYQIKATERMAEAAKDTREVWKAYLYARMFLPPAIPQKQVEAFQLMY-KGVKLTWEKHNTHPIQCVATPLVQIPTFLLMAYSTRELVRSGKVDGLDTGGVWLFQNLVEADSTFILPALAVGCTYLNFEL----MGTSKIKLLQSLKNKFQYIPLLSFPFICQIPQGIFFYWLASSWCSFAQTMALRQPSIRRALGLKDVPTATASPSISAQD-PAKSLLPSTP 315
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|1183327178|gb|ORX56936.1| (hypothetical protein DM01DRAFT_1334493 [Hesseltinella vesiculosa]) HSP 1 Score: 139.428 bits (350), Expect = 9.601e-34 Identity = 76/243 (31.28%), Postives = 130/243 (53.50%), Query Frame = 0 Query: 97 PVRSMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMIDQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLGFPTV--PKERLQ 337 PV ++ +LE H + GLPWWA+I +T+ R ALLP++ +L R ++ +N + + + ++ G T Y+ ++ K ++ + ++ P++Q+PV ++F +A R M + VPG+ +GG+AWF DLT DP +LP + LE G + + +K+ ++ +L P ++ +P+GVFIYW TS+VY Q AL+NP +R L P + P + LQ Sbjct: 97 PVGGLEAMLEAVHVSMGLPWWATIATATVLVRTALLPLI-------IKLQRNNARLMNINPDVQRIMGNLKTAQSEGDTLATTKYSGELQELFKKNECHPMKSLGLPLIQMPVMISFFMALRAMAELPVPGMVDGGLAWFTDLTAKDPYYVLPAVSAAGMLAVLEAG-TEAGSATPQSKGMKNFMRGVTVLMVPFTAWMPSGVFIYWLTSNVYSIGQILALKNPAIRKGLNIPQLIKPAKELQ 331
BLAST of EWM27696.1 vs. NCBI_GenBank
Match: gi|298707359|emb|CBJ30003.1| (Oxa1-like homolog, mitochondrial inner membrane insertase [Ectocarpus siliculosus]) HSP 1 Score: 135.961 bits (341), Expect = 1.357e-33 Identity = 79/227 (34.80%), Postives = 125/227 (55.07%), Query Frame = 0 Query: 100 SMQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMI-DQQVPGLEEGGVAWFEDLTEADPL--LILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVR 323 +Q+ ++ H TGLPWWA+I ++T+ +++LLPVV YQA + R+ A P + L L+ L+ + + + +G R L LH L A+P+V LPVF+TF + R M+ D VPGL+ G EAD + L+LP++ TY +LE+ ++ + ++F +D +Q F+IL P ST P GVF+YW S+V+ Q + ++N VR Sbjct: 6 GVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTG---------EADTVHSLMLPIIGTLCTYTSLEI--VKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVR 221 The following BLAST results are available for this feature:
BLAST of EWM27696.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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