EWM30364.1, cds298 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|585113024|gb|EWM30364.1| (nuclear pore complex protein nup98-nup96 isoform 1 [Nannochloropsis gaditana]) HSP 1 Score: 2290.38 bits (5934), Expect = 0.000e+0 Identity = 1138/1138 (100.00%), Postives = 1138/1138 (100.00%), Query Frame = 0
Query: 1 MDDAQLRRVRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSVRHRRKSPEEYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTLVGIFGVEEEDDTEGTEAYGRRARAESEERPLSSLEDDGGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSLPSARAVSRVAPAPSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGPDGSLAAPFVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEATRREDDASRQTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIPLAGHKPATDYLRQQPALRRTVQDPALAAIYGLLSGTGSEANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAWHDARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFGWAFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLEDSWGEKEAPAPAHFEEQLMAILPSLVDGGQGGDRNGCFNWCAERLDPGEAGRVIDMYAQRGSRSAPDSMPPPLHAIRNMVLTDVIKKLFFFHRLQARERSMWEEGMAPRSCLPGKSQLCRLEDMCQDYALQQVGCLTSDFIARRLDGDEVF 1138
MDDAQLRRVRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSVRHRRKSPEEYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTLVGIFGVEEEDDTEGTEAYGRRARAESEERPLSSLEDDGGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSLPSARAVSRVAPAPSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGPDGSLAAPFVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEATRREDDASRQTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIPLAGHKPATDYLRQQPALRRTVQDPALAAIYGLLSGTGSEANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAWHDARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFGWAFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLEDSWGEKEAPAPAHFEEQLMAILPSLVDGGQGGDRNGCFNWCAERLDPGEAGRVIDMYAQRGSRSAPDSMPPPLHAIRNMVLTDVIKKLFFFHRLQARERSMWEEGMAPRSCLPGKSQLCRLEDMCQDYALQQVGCLTSDFIARRLDGDEVF
Sbjct: 1 MDDAQLRRVRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSVRHRRKSPEEYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTLVGIFGVEEEDDTEGTEAYGRRARAESEERPLSSLEDDGGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSLPSARAVSRVAPAPSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGPDGSLAAPFVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEATRREDDASRQTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIPLAGHKPATDYLRQQPALRRTVQDPALAAIYGLLSGTGSEANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAWHDARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFGWAFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLEDSWGEKEAPAPAHFEEQLMAILPSLVDGGQGGDRNGCFNWCAERLDPGEAGRVIDMYAQRGSRSAPDSMPPPLHAIRNMVLTDVIKKLFFFHRLQARERSMWEEGMAPRSCLPGKSQLCRLEDMCQDYALQQVGCLTSDFIARRLDGDEVF 1138
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|975135222|ref|XP_015283799.1| (PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X2 [Gekko japonicus]) HSP 1 Score: 218.009 bits (554), Expect = 7.218e-54 Identity = 288/1054 (27.32%), Postives = 423/1054 (40.13%), Query Frame = 0
Query: 9 VRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSV-------RHRRKSPE-----EYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTLVGIFGVEEED-DTEGTEAYGR--------------RARAESEERPLSSLEDDGGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSLPSARAVSRVAPA---PSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGP---------------------DGSLAAPFVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVH-KAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEAT--RREDDASRQ---TWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIP-LAGHKPATDYLRQQPALRRTVQDPALAA-----IYGLLSGTGS-EANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAWH--DARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRF--------GWAFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFL-RAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLE 987
V +F + R+GYG I +EG+ D+ L+LDE+V I KEV VY D +K G+ LN+ A VTL V R KSPE Y L + R +F +Y+ ETG W FKV+HFSKYG++D D+EE+ + E +K K Q G + +R P S D + VEL D + +EE GEE E+ P + ++ + VEEED D +GR R S R S GG + L + S L S+ ++ APS+P +S +AP PS++P + + R G V P + +VA G+ G+ +D + FMGRSFRVGW P D SL F+ P ++ +V ++ L++ E T G + L YL PL + K ++ AP G A V A A EA+ E + + W L ALWG+ +ARP S + AL ERR +A +WL + +ED A+ AV + RI++A LA +SG RLA L+ L G + + + Q A +Q + I+ LL+G +E + LDW R +G ++W+ +P + + G + + D+ PLP +L G G D + + + LL++Y Y L +LDPR +T N DYRLSW + +L AL+ H + Q + +S QL GLW WAV+VLLH P R AV++L+ R WA + +FL++ L VP W+ DA+A R QG D K +AL FL RAG L++ +A +++++ L L PE L G Y+ V+E L ++
Sbjct: 717 VTDFTIGRKGYGSIYFEGDVDLTNLDLDEIVHIRRKEVIVYPDDELKPPIGEGLNRRAEVTLDGVWPTDKTSRVLIKSPERLAEMSYESRLEAVSRK-QGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEDEHPSKAEAKK--------------LKTVQPPPVGQSQPAALSRKPA---PSSQSPDIEQLGKAVELDSDMADVTQEAAPEFAAEESLGEEP--ELVPASAHIASSLEINPHTLQIMKASLLVEEEDLDLILDRGFGRQLTPADTPRAICSPRVPISSASRGQKSRPSAGGLLQSRLLNGSFLHPAASLQDGRSLRTTSLGGAPSVPPWPTLSPLAPTITVPSSAPDVPLKVVGVRRQPGLV---PLEK---SVAYGK------------GKLLMDMALFMGRSFRVGWAPNWTLVHNGEQLSHSSDQADSPDESLEYGFLPAPFAPKQFSESPFKVHMEKLSL---EGKTVDGDQQL--YLVPLEIKLKHSTVHMDEQCPFLAPNPGVTA-----------------VHEYAAWAREASGDPEESEVVKHWYLVWTLCEALWGRLKELEARPGEPSEYIVAL--------------ERR-KAFSQWLSQTASERIEDEVSLSQHHSPAE--AVFSYLTGKRISEACGLAQQSGDHRLALLLSQLVGSQEVRELMAMQLADWHQLQADSFIQEERLRIFALLAGKPVLHLSEQRSINVCSQLDWKRTVGVHLWYLLPSTAPLSQALGMYE-----AAFQDSSASDKYACSPLPPYLE-----GSGCVVEEGDPQHSVQDVCFHLLKLYSDRCYDLHQLLDPRSITANPLDYRLSWHLWEVLRALNYTH--------LSEQCQGVLNASYAAQLEREGLWEWAVFVLLHTPNAHVRERAVRELLSRHCMLSETPDSWAKE------TFLMERLCVPPEWIYDAKAVRARMQG----DNHK-----EAL--FLSRAGHWNPCHRLVVRHLAADAIVNEQYTYLKGFLEDMATPEHSLLIQDWETEG-LVFLDYIRVIEMLGRIQ 1657
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|975135218|ref|XP_015283797.1| (PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X1 [Gekko japonicus] >gi|975135220|ref|XP_015283798.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X1 [Gekko japonicus]) HSP 1 Score: 218.009 bits (554), Expect = 8.083e-54 Identity = 288/1055 (27.30%), Postives = 423/1055 (40.09%), Query Frame = 0
Query: 9 VRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSV-------RHRRKSPE-----EYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTLVGIFGVEEED-DTEGTEAYGR--------------RARAESEERPLSSLEDDGGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSLPSARAVSRVAPA---PSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGP---------------------DGSLAAPFVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVH-KAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEAT--RREDDASRQ---TWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIP-LAGHKPATDYLRQQPALRRTVQDPALAA-----IYGLLSGTGS-EANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDDEMPSPPLPAWLRAR---WERGRGRAWHDARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRF--------GWAFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFL-RAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLE 987
V +F + R+GYG I +EG+ D+ L+LDE+V I KEV VY D +K G+ LN+ A VTL V R KSPE Y L + R +F +Y+ ETG W FKV+HFSKYG++D D+EE+ + E +K K Q G + +R P S D + VEL D + +EE GEE E+ P + ++ + VEEED D +GR R S R S GG + L + S L S+ ++ APS+P +S +AP PS++P + + R G V P + +VA G+ G+ +D + FMGRSFRVGW P D SL F+ P ++ +V ++ L++ E T G + L YL PL + K ++ AP G A V A A EA+ E + + W L ALWG+ +ARP S + AL ERR +A +WL + +ED A+ AV + RI++A LA +SG RLA L+ L G + + + Q A +Q + I+ LL+G +E + LDW R +G ++W+ +P + + G + + D+ PLP +L E G D + + + LL++Y Y L +LDPR +T N DYRLSW + +L AL+ H + Q + +S QL GLW WAV+VLLH P R AV++L+ R WA + +FL++ L VP W+ DA+A R QG D K +AL FL RAG L++ +A +++++ L L PE L G Y+ V+E L ++
Sbjct: 748 VTDFTIGRKGYGSIYFEGDVDLTNLDLDEIVHIRRKEVIVYPDDELKPPIGEGLNRRAEVTLDGVWPTDKTSRVLIKSPERLAEMSYESRLEAVSRK-QGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEDEHPSKAEAKK--------------LKTVQPPPVGQSQPAALSRKPA---PSSQSPDIEQLGKAVELDSDMADVTQEAAPEFAAEESLGEEP--ELVPASAHIASSLEINPHTLQIMKASLLVEEEDLDLILDRGFGRQLTPADTPRAICSPRVPISSASRGQKSRPSAGGLLQSRLLNGSFLHPAASLQDGRSLRTTSLGGAPSVPPWPTLSPLAPTITVPSSAPDVPLKVVGVRRQPGLV---PLEK---SVAYGK------------GKLLMDMALFMGRSFRVGWAPNWTLVHNGEQLSHSSDQADSPDESLEYGFLPAPFAPKQFSESPFKVHMEKLSL---EGKTVDGDQQL--YLVPLEIKLKHSTVHMDEQCPFLAPNPGVTA-----------------VHEYAAWAREASGDPEESEVVKHWYLVWTLCEALWGRLKELEARPGEPSEYIVAL--------------ERR-KAFSQWLSQTASERIEDEVSLSQHHSPAE--AVFSYLTGKRISEACGLAQQSGDHRLALLLSQLVGSQEVRELMAMQLADWHQLQADSFIQEERLRIFALLAGKPVLHLSEQRSINVCSQLDWKRTVGVHLWYLLPSTAPLSQALGMYE-----AAFQDSSASDKYACSPLPPYLEGSGCVVEEG------DPQHSVQDVCFHLLKLYSDRCYDLHQLLDPRSITANPLDYRLSWHLWEVLRALNYTH--------LSEQCQGVLNASYAAQLEREGLWEWAVFVLLHTPNAHVRERAVRELLSRHCMLSETPDSWAKE------TFLMERLCVPPEWIYDAKAVRARMQG----DNHK-----EAL--FLSRAGHWNPCHRLVVRHLAADAIVNEQYTYLKGFLEDMATPEHSLLIQDWETEG-LVFLDYIRVIEMLGRIQ 1688
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|530597409|ref|XP_005292235.1| (PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X3 [Chrysemys picta bellii]) HSP 1 Score: 212.616 bits (540), Expect = 3.283e-52 Identity = 275/1047 (26.27%), Postives = 424/1047 (40.50%), Query Frame = 0
Query: 9 VRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSV-------RHRRKSPE-----EYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTLVGIFGVEEED-DTEGTEAYGRRARAE-------SEERPLSSLEDD------GGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSL---PSARAVSRVAPAPSASPALGFVAPSL-MRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGPDGSLAAP---------------------FVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEATRREDDASR--QTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIP-LAGHKPATDYLRQQPALRRTVQDPALAA-----IYGLLSGTGS-EANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDD-----EMPSPPLPAWLRARWERGRGRAWHDARVGP-NSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFG-WAFQPGS-TDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLE 987
V +F + R+GYG I +EGE ++ LNLDE+V I KEV VY D K G+ LN+ A VTL V R KSPE Y L + R +F +Y+SETG W FKV+HFSKYG++D D+EEE + + +K K V Q+MA G P S + VEL D + + + E+ EE E+ P G+ ++ + +EED D +G++ S P+S+L+ GG + L S S + S+++ SL PSA + S ++P PSA ++ AP + ++ GA + +V G+ G+ +D + FMGRSFRVGWGP+ +L F+ V P ++ +V ++ L + E T G + YL PL + + + R P G V H D + +A E TW L A+WG L SL + ++ ERR +A RWL + +E+ V S E+ + AV + RI++A +A +SG RLA L+ L G + + L Q +Q I+ LL+G + +E + LDW R + ++W+ P A + A L + AF + + PLP +L + G D+ P + + LL++Y Y L+ +LDPR +T + DYRLSW + +L AL+ H + Q + +S QL GLW WA++VLLH T R AV++ + R + P S T +FL +L +P W+ +A+A R +G D+ K A + +AG +L++ +A +I++ L L PER L I + A YL+ + + L+
Sbjct: 725 VTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHIRRKEVIVYPDDDQKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLADINYEGRLEAVSRK-QGAQFKEYRSETGSWVFKVAHFSKYGLQDSDEEEEEHPSKVDAKKLKTAQVPPQGQLVPQQMA---------------LNGKPTPPSQSPEVEQLGRVVELDSDMADITQEPAQDSILEDSITEEP--ELVPASTHIASSLGINPHVLQIMKASLLADEEDVDLILDHHFGKQPTKMDTSQEICSPRLPISALQGQKRHSSVGGLLQSKLASVS-------FLQSASLQDFHGPRTSSLGNPPSAASWSGLSPLPSAF-SMPSAAPEVQLKTVGACRQQGLIPLEKSVTYGK------------GKLLMDMALFMGRSFRVGWGPNWTLVNSGDKLSGSSEPEDLRNDSMEYGFLPTPVAPKSLSESPFKVHIEKLTL--ERRKTDGDQQ---LYLIPLEIK---LKHSTVHVDERCPLLAANPG---------VSAIHDYADWVRDFCGDAAEIESVVKYWCLTWMLCEAIWGHLK-------ELEASLEEPSEYIV-------TLERR-KAFSRWLSQTAAARIEE-EVSLSQHEN-HIEAVFSYLTGKRISEACRVAQQSGDHRLALLLSQLVGSQQVRELLTMQLVDWHGLQADCFIQEERLRIFALLAGKPVWQLSERKSINVCSQLDWKRSIAIHLWYLL---PPTASISKA-------LNMYEAAFQNTPECEKYACCPLPPYLE---DSGCVLEEDDSTKRPLRDVCFHLLKLYSDRCYDLNQLLDPRSITSDPLDYRLSWHLWEVLRALNYTH--------LSEQCQGVLNASYAAQLESEGLWEWAIFVLLHTSNTHTREKAVREFLNRHCVLSETPESWTKETFLTQKLCIPPEWIHEAKAVRARMEG----DKHKEAL------YLFKAGHWNQCHKLVIKHLASDAIINENYNYLKGFLEDLSPPERSTL----IQDWDTAGLVYLDYIRVIEMLD 1664
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|530597407|ref|XP_005292234.1| (PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X2 [Chrysemys picta bellii]) HSP 1 Score: 212.231 bits (539), Expect = 5.320e-52 Identity = 276/1047 (26.36%), Postives = 426/1047 (40.69%), Query Frame = 0
Query: 9 VRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSV-------RHRRKSPE-----EYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTLVGIFGVEEED-DTEGTEAYGRRARAE-------SEERPLSSLEDD------GGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSL---PSARAVSRVAPAPSASPALGFVAPSL-MRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGPDGSLAAP---------------------FVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEATRREDDASR--QTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIP-LAGHKPATDYLRQQPALRRTVQDPALAA-----IYGLLSGTGS-EANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDD-----EMPSPPLPAWLRARWERGRGRAWHDARVGP-NSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFG-WAFQPGS-TDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLE 987
V +F + R+GYG I +EGE ++ LNLDE+V I KEV VY D K G+ LN+ A VTL V R KSPE Y L + R +F +Y+SETG W FKV+HFSKYG++D D+EEE + + +K K V Q+MA G P S + VEL D + + + E+ EE E+ P G+ ++ + +EED D +G++ S P+S+L+ GG + L S S + S+++ SL PSA + S ++P PSA ++ AP + ++ GA + +V G+ G+ +D + FMGRSFRVGWGP+ +L F+ V P ++ +V ++ L + E T G + YL PL + + + R P G V H D + +A E TW L A+WG L SL + ++ ERR +A RWL + +E+ V S E+ + AV + RI++A +A +SG RLA L+ L G + + L Q +Q I+ LL+G + +E + LDW R + ++W+ P A + A L + AF + + PLP +L + G D+ P + + LL++Y Y L+ +LDPR +T + DYRLSW + +L AL+ H + Q + +S QL GLW WA++VLLH T R AV++ + R + P S T +FL +L +P W+ +A+A R +G D+ K +AL + +AG +L++ +A +I++ L L PER L I + A YL+ + + L+
Sbjct: 750 VTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHIRRKEVIVYPDDDQKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLADINYEGRLEAVSRK-QGAQFKEYRSETGSWVFKVAHFSKYGLQDSDEEEEEHPSKVDAKKLKTAQVPPQGQLVPQQMA---------------LNGKPTPPSQSPEVEQLGRVVELDSDMADITQEPAQDSILEDSITEEP--ELVPASTHIASSLGINPHVLQIMKASLLADEEDVDLILDHHFGKQPTKMDTSQEICSPRLPISALQGQKRHSSVGGLLQSKLASVS-------FLQSASLQDFHGPRTSSLGNPPSAASWSGLSPLPSAF-SMPSAAPEVQLKTVGACRQQGLIPLEKSVTYGK------------GKLLMDMALFMGRSFRVGWGPNWTLVNSGDKLSGSSEPEDLRNDSMEYGFLPTPVAPKSLSESPFKVHIEKLTL--ERRKTDGDQQ---LYLIPLEIK---LKHSTVHVDERCPLLAANPG---------VSAIHDYADWVRDFCGDAAEIESVVKYWCLTWMLCEAIWGHLK-------ELEASLEEPSEYIV-------TLERR-KAFSRWLSQTAAARIEE-EVSLSQHEN-HIEAVFSYLTGKRISEACRVAQQSGDHRLALLLSQLVGSQQVRELLTMQLVDWHGLQADCFIQEERLRIFALLAGKPVWQLSERKSINVCSQLDWKRSIAIHLWYLL---PPTASISKA-------LNMYEAAFQNTPECEKYACCPLPPYLE---DSGCVLEEDDSTKRPLRDVCFHLLKLYSDRCYDLNQLLDPRSITSDPLDYRLSWHLWEVLRALNYTH--------LSEQCQGVLNASYAAQLESEGLWEWAIFVLLHTSNTHTREKAVREFLNRHCVLSETPESWTKETFLTQKLCIPPEWIHEAKAVRARMEG----DKHK-----EAL-YLFKAGHWNQCHKLVIKHLASDAIINENYNYLKGFLEDLSPPERSTL----IQDWDTAGLVYLDYIRVIEMLD 1689
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|530597405|ref|XP_005292233.1| (PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X1 [Chrysemys picta bellii]) HSP 1 Score: 212.231 bits (539), Expect = 5.413e-52 Identity = 276/1047 (26.36%), Postives = 426/1047 (40.69%), Query Frame = 0
Query: 9 VRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSV-------RHRRKSPE-----EYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTLVGIFGVEEED-DTEGTEAYGRRARAE-------SEERPLSSLEDD------GGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSL---PSARAVSRVAPAPSASPALGFVAPSL-MRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGPDGSLAAP---------------------FVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEATRREDDASR--QTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIP-LAGHKPATDYLRQQPALRRTVQDPALAA-----IYGLLSGTGS-EANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDD-----EMPSPPLPAWLRARWERGRGRAWHDARVGP-NSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFG-WAFQPGS-TDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLE 987
V +F + R+GYG I +EGE ++ LNLDE+V I KEV VY D K G+ LN+ A VTL V R KSPE Y L + R +F +Y+SETG W FKV+HFSKYG++D D+EEE + + +K K V Q+MA G P S + VEL D + + + E+ EE E+ P G+ ++ + +EED D +G++ S P+S+L+ GG + L S S + S+++ SL PSA + S ++P PSA ++ AP + ++ GA + +V G+ G+ +D + FMGRSFRVGWGP+ +L F+ V P ++ +V ++ L + E T G + YL PL + + + R P G V H D + +A E TW L A+WG L SL + ++ ERR +A RWL + +E+ V S E+ + AV + RI++A +A +SG RLA L+ L G + + L Q +Q I+ LL+G + +E + LDW R + ++W+ P A + A L + AF + + PLP +L + G D+ P + + LL++Y Y L+ +LDPR +T + DYRLSW + +L AL+ H + Q + +S QL GLW WA++VLLH T R AV++ + R + P S T +FL +L +P W+ +A+A R +G D+ K +AL + +AG +L++ +A +I++ L L PER L I + A YL+ + + L+
Sbjct: 767 VTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHIRRKEVIVYPDDDQKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLADINYEGRLEAVSRK-QGAQFKEYRSETGSWVFKVAHFSKYGLQDSDEEEEEHPSKVDAKKLKTAQVPPQGQLVPQQMA---------------LNGKPTPPSQSPEVEQLGRVVELDSDMADITQEPAQDSILEDSITEEP--ELVPASTHIASSLGINPHVLQIMKASLLADEEDVDLILDHHFGKQPTKMDTSQEICSPRLPISALQGQKRHSSVGGLLQSKLASVS-------FLQSASLQDFHGPRTSSLGNPPSAASWSGLSPLPSAF-SMPSAAPEVQLKTVGACRQQGLIPLEKSVTYGK------------GKLLMDMALFMGRSFRVGWGPNWTLVNSGDKLSGSSEPEDLRNDSMEYGFLPTPVAPKSLSESPFKVHIEKLTL--ERRKTDGDQQ---LYLIPLEIK---LKHSTVHVDERCPLLAANPG---------VSAIHDYADWVRDFCGDAAEIESVVKYWCLTWMLCEAIWGHLK-------ELEASLEEPSEYIV-------TLERR-KAFSRWLSQTAAARIEE-EVSLSQHEN-HIEAVFSYLTGKRISEACRVAQQSGDHRLALLLSQLVGSQQVRELLTMQLVDWHGLQADCFIQEERLRIFALLAGKPVWQLSERKSINVCSQLDWKRSIAIHLWYLL---PPTASISKA-------LNMYEAAFQNTPECEKYACCPLPPYLE---DSGCVLEEDDSTKRPLRDVCFHLLKLYSDRCYDLNQLLDPRSITSDPLDYRLSWHLWEVLRALNYTH--------LSEQCQGVLNASYAAQLESEGLWEWAIFVLLHTSNTHTREKAVREFLNRHCVLSETPESWTKETFLTQKLCIPPEWIHEAKAVRARMEG----DKHK-----EAL-YLFKAGHWNQCHKLVIKHLASDAIINENYNYLKGFLEDLSPPERSTL----IQDWDTAGLVYLDYIRVIEMLD 1706
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|632976657|ref|XP_007904917.1| (PREDICTED: LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96 [Callorhinchus milii]) HSP 1 Score: 192.586 bits (488), Expect = 6.530e-46 Identity = 268/1048 (25.57%), Postives = 409/1048 (39.03%), Query Frame = 0
Query: 9 VRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPA--VVTLFSVRHRRKSPEEYGEHLRELCRGWD-RVE---------FLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRA--PPLYGLEASRIKTLVGIFGVEEEDDTEGTEAYGRRARAESEERPLSSLEDDGGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMA-------PSLPSARAVSRVAPAPSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEG----GTGRKPVDYSAFMGRSFRVGWGPDGSLAAPFVGRVVRPGMAAKVEAQ-----------VLVKSLAVTPEEAGT-KGGVEGLRG----YLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHMVDCLHALATEATRREDDASR--QTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDW----ERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIPLAG----------------HKPATDYLRQQPALRRTVQDPALAAIYGLLSGTGSEANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGA--GDDDTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAWHDARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFGWAFQPGSTDWS----FLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLE 987
V NF + R+GYG I + G ++ +NLDE+V I KEV VY D K + LN+ L+ +SP + E L E+ G++ R+E FL+Y+SETG W F+V+HFSKYG+++ D+E+E + E +K K + + AQ+ A P +S + E V V + D + + L + E+ E PV + G+ ++ + E+ED G R + P++ + G R L GR +++ ++ ++ P PS RA P PSA F PS P D L RR + E G GR +D F+GRSFRVGWGP GS R+ P + Q V VK L+ P + + + G RG Y PL + R + G T V H VD + T + +E R W L ALWG+ + L P + H+ + ERR +A WL +E E+ + AV + RI++A LA +SG RLA L+ A H+ D Q+ LR I LL+G + LDW R L ++W+ P A A A DD + ++++ PLP +L R + + P + Y LL+++ + L +L P +TE DYRLSW + +L AL+ H + + V SS QL GLW WA+++LLH P + R AV++L+ R + + +W FL L VPA W+ +A+A LRA G + +AL H L AG A +L+++ +A +I+++ L L PE + A I + A +L+ + ++L+
Sbjct: 761 VENFTIGRKGYGSIYFPGVVNLSNMNLDEIVHIRRKEVIVYLDDERKPPASEGLNRXQQHCERLWXXDKTTRSPIKSPERLLEM--GYEERLENASRKQGARFLEYRSETGSWVFEVAHFSKYGLKESDEEDEELPSKAETKKLK-------TASLPSQQAQQAAPS---------------PKPAPTSQSPSLERVARVAELDSDMTDITQEPLPDCYLEEDITEEQEPVSASSNIASTLGINPHTLQIMKASLFAEDED------MDGIVERRFTRFPPVTDTSLELGSPHR-LCPGPRGRTSVGGLLQSKFTSSSLLLSGARLQDSPEAPSPRAWLVPTPLPSA-----FAMPS-----------PLPDVPLRTVGVRRQQRLVQLERSVTRGKGRLLMDMGLFIGRSFRVGWGP-GSTLCHAGDRLSVPTTDTETPEQDGLEYGFFPKPVKVKQLSELPFKVHVERVMLRGERGDGDLYQEPLEI------------ALRHSSVQTQDGCPLITPQPGVEALHQYVDWVQTALTGSEEKEAVLRRWGLVWTLCEALWGR------------------LKALEPRASQHSPYVQQLERR-RAFSHWLSLTAHHRIEQ--EVAVAQETGHVDAVFSYLTGKRISEACRLAQRSGDHRLALLLAQAVGSEQVRELLAMQLLDWHQLTADQFMQEDRLR----------IVALLAGKPVWETSEGVVNACSQLDWKRCLAIHLWYVLP---PTASVADALRVYDDAFKGTETVQSYARF----PLPGYLEDCEIAARSE---EDQTPPQDICYHLLKLHSDRYHELPQLLSPGTVTEERLDYRLSWHVWAVLQALNYSH--------VSEKQQGLVHSSYAAQLESAGLWHWAIFILLHIPSSQRRERAVRELLARHCPLVE--TEEWQRREEFLRHSLAVPARWIHEAKA--LRAH-------RDGDAHREAL-HLLEAGHWNACHQLVVSQLASDAIINEKHSYLQQFLERLAQPE----SRAHIQDWDNAGSIFLQYIRITQNLQ 1683
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|1025072046|ref|XP_016337549.1| (PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 190.66 bits (483), Expect = 2.651e-45 Identity = 266/1038 (25.63%), Postives = 409/1038 (39.40%), Query Frame = 0
Query: 9 VRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSV-------RHRRKSPE-----EYGEHLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRA--PPLYGLEASRIKTL-VGIFGVEEEDDTEGTEAYGRRARAESEERPLSSLEDDGGFGRRDLFSFSEGR--NDGVLMVEDSVEERAIAMAPSLPSARAVSRVAPAPSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGPDGSLAAPFVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHM---------------VDCLHALATEATRREDDAS---------RQTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIPLA-GHKPATDYLRQQPALRRTVQDPALAA-----IYGLLSGTGSEANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAG------SAGAGDDDTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAWH--DARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFG--WAFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLEDS 989
V NF V R+GYG + + GE ++ +NLDE+V KE+ VY D K G+ LN+ A VTL V + KSPE Y L R FL+Y+ ETG W F+V+HFSKYG+++ D+EEE T +L+K K G G ++ Q T R+ + + D D +T E G ED E L E + E E PV + G+ ++ + +F E+D+ + + +G + P L G GR + + + + + G L + + AP + +S+ + S P LG PS + A PT T+ A G + G G +D + F GRSFRVGWGP+ +L G + A K E + P+ +K E P V G+EP + R +++GL H VD LH A D RQ W L AL+G+ G S Q+ L S + W C A C + EV G + A+ + H I+ A L+ KSG RLA L+ A G + D L Q + ++Q + I+ LL+G + S + LDW R + ++W+ + A SA G ++ R PPLP +L G + D++ + + LL++Y Y L +LDP +T + +Y LSW + +L AL+ H + + Q + +S QL GLW A++VLLH P++ R AV++++ + FL ++L +P W+ A+A +RA EG S +AL H +AG L++ +A +I+D L L G PER SG + Y+ V++ L+ ++ +
Sbjct: 758 VENFTVGRKGYGSVFFSGEVNLTNMNLDEIVHFRRKEIIVYPDDKDKPSVGEGLNRRAEVTLDGVWPNDKTTCSQIKSPERLIEMNYEGRLEAASRK-QGARFLEYRPETGSWVFEVAHFSKYGLQESDEEEEAPPTKLDLKKLKTG-VPPGIPQLPLTQQQMAPQAQSTAVLELRS---RVSELDSDMADITQEHPADSVLGEEDR----ERTLEENKLRSETPAEHEPVSASSQIASSMGINPHTLQIMKASLFA--EDDECDFFQEHGSSKLVQDVASPKVLL---SGAGRPSIGALLQTKFISGGGLFSQ-------LPEAPFEGIPQKLSKSLASESPWPLLG---PSFL--LPAPPPEPTLQTVGARRLGGPVPLESSITLGKGHLLMDSALFRGRSFRVGWGPNWTLV--HCGDPLSVTEAMK-EQSAEIMGFGFLPKPTKSKPITE------NPFKVRMEQVVGLEPKQSAESLTLYHRP--------LEIGLKHSTINTEHSCPFIQPAKGVDALHGYAEWIVEVNTDIGGGDAGLAHWRQVWTLCAALFGRLGDRDVETEQYSD-----YQLQLERRRSFSHWLSECVAEC------IEEEV------GRALQRNHAEAIFSYLTGHCISKACKLSQKSGDHRLALLLSQAVGSQFCRDLLALQLSDWNSMQTDSFIEEERLRIFALLAGKPVWQSSDSCINVCSELDWKRCVAVHLWYMLPPTASVADALSKYESAFQGSEEVKRYAC-----------PPLPPYLDEVELLGLDEEMNETDSKKPLYDICFHLLKLYSDRHYSLQQLLDPSTVTADHLNYWLSWHLWNVLQALNYNH------LSISCQGLLH--ASYAAQLESAGLWEMAIFVLLHIPDSGRRESAVREMLNLHCSLEETEESMEKEQFLTEKLLIPIQWIHQAKA--IRA-----CREGDKRS--EAL-HLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPERSVQIQDWDTSG-RVFLDYIHVIQTLQDIQQT 1705
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|1062651491|ref|XP_017961952.1| (PREDICTED: nuclear pore complex protein Nup98-Nup96 [Drosophila navojoa]) HSP 1 Score: 178.718 bits (452), Expect = 1.455e-41 Identity = 237/1039 (22.81%), Postives = 400/1039 (38.50%), Query Frame = 0
Query: 9 VRNFCVTREGYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSV------RHR-RKSPEEYGE-----HLRELCRGWDRVEFLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGGDEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEER-------GEEEVMEMP-----PVGGRAPPLYGLEASRIKTLVGIFGVEEEDDTEGTEAYGRRARAESEERPL------------SSLEDDGGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSLPSARAVSRVAPAPSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEGGTGRKPVDYSAFMGRSFRVGWGPDGSLAAPFVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFR---AGGSP--ATGDVDVGLYHHMVDCLHALATEATRREDDASRQTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIPLAGHKPATDYLRQQP--ALRRTVQDPALA----AIYGLLSGTGSEANETSDEGPKAGL---DWMRRLGEYMWFKTDGRSPGAGSAGAGDD--DTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAWHDARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFGW--AFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGN-----KACWAYLEVLEALRHLED 988
V NF + REGYG + + E DV GLNLDE+V KEV +Y D K G LN+ A VTL V +H K P+ E LR +C + F++Y+ ETG W F+V HFSKYG+ D D++++ + +K K D + + + + L + I D KS+ A V GF N E ++ ++ + + + + P P A + G E +++ + VE++ + +A + + + P ++ E +GR+ ++ D E A ++ P V PA +PA V P K +P + V R+ G D + GRSF++ +GP +L P +R ++ ++L +L P + L + ++ FA + P E + F G P + + + H+ + A+ T W L ALWG+ +++ D SH R + WL+ + +DL + S L +L+L+ HR+T+A LA K LA ++ L ++ A +++ D ++ ++ L +G S GP L +W+ L +W+ T A ++ D + D+ A E + DE P P++ ++ +D R Y LLQ++ + L L+P T + D+RLSW++L L AL H T+ V QL GLW W+V+VLLH + R AV+ ++ + A S + F++ +LGVP W++ A+A L G + L+A A E+I +AP +I+ L+ LL+ F E T++T+ N + Y+++ E +H+ +
Sbjct: 912 VPNFTIGREGYGNVYFGKELDVAGLNLDEIVHFRNKEVIIYPDDDNKPPIGNGLNREAQVTLDQVWPLDKTKHEPVKDPQRLLEIDWEGKLRRVCDK-NSTRFIEYRPETGSWVFRVKHFSKYGLNDSDEDDD---VPADPKKAKTA-ATDAQRTAATAIDKVSLTSLHKSQRISEEAARNI-----DPKSLAAG----VASGFRPMDNSAEFLMIDKTQFFQAGSGADFTMFDAPRTVPSPTAALAQDIVGKEPHKMQLMKSSLFVEDQGSDDELDAQPKLNPPQVKRTPNLFNKDTYLWKEPAASESSSDYGRQSPLLAVSSSASVTSIIRDVQSEEASSVVPD--------SVKPAQKKTPATSLVGPKPFDFVIKPKVAP-----IKVFGSVVPLTRSIAYGHYNHWIADLGFYKGRSFKLSFGPQNTLMVPNTLNNLR--SIHEINNKMLPAALVFQPRASNDLSSNVLLSIKFNTVDMYTQFAESIVPHLEVQLQDCSFNKVEGSGCPWLQSNNGTKLIAKHLAE---AIKLNNTSTMAAYGVSVWSLLFALWGEHD-----------------ELIGRDDNSHYVIMCRRNLLSEWLENTLVS--KDLLSKKVSSNSY-LEHMLELLSCHRVTEACELAFKYDDAYLALILAQLSSGAVVRLLMEEQLFAWQQSKSDKYISLERIKMFMLAAGV---PLMMSSHGPINLLEDGNWLNVLALQLWYFT------APTSTITDALLEYDKAFQAEELYADE----PKPSYSGTPYK--SKNPVYDLR-------YHLLQLFSKRKHSLEQTLNPITHTSDPMDFRLSWMLLQTLEALGYTH------CSPLTEAQFHV--DFASQLENEGLWQWSVFVLLHIKDRNQRERAVQHILQQHVSLDANVALSDEEQFVIHQLGVPETWVDYAKA----------LKAGANGQRHMQAKYLLKAKHWVLAHEIIFQYIAPDAVINSNLQYLYNLLSQF------ESTESTVKVPNWTNQGQIFLDYIDINEKFKHIHN 1852
BLAST of EWM30364.1 vs. NCBI_GenBank
Match: gi|1025090510|ref|XP_016342625.1| (PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 171.014 bits (432), Expect = 2.943e-39 Identity = 248/1055 (23.51%), Postives = 408/1055 (38.67%), Query Frame = 0
Query: 18 GYGKIEWEGETDVLGLNLDELVRIEAKEVRVYDDVPVKDEEGKKLNKPAVVTLFSVRHRRKSPEEYGEHLRELCR-GWD-RVE---------FLDYQSETGRWTFKVSHFSKYGVEDEDDEEEGGTTGHELRKGKGG-DEADGDGRVGQKMAQETASGLGTGDSGARTGGYGIPDSDEDDKSVTAEEVELVEDGFEDEGNEVEGVLSEEERGEEEVMEMPPVGGRAPPLYGLEASRIKTL-VGIFGVEEEDDTEGTEAYGRRARAESEERPLSSLEDDGGFGRRDLFSFSEGRNDGVLMVEDSVEERAIAMAPSLPSARAVSRVAPAPSASPALGFVAPSLMRGCGAVKTSPTDDTLLAVATGRRARERAGEEG---GTGRKPVDYSAFMGRSFRVGWGPDGSLAAPFVGRVVRPGMAAKVEAQVLVKSLAVTPEEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSPATGDVDVGLYHHM---------------VDCLHALATEATRREDDAS---------RQTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWER---RCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIPLA-GHKPATDYLRQQPALRRTVQDPALAA-----IYGLLSGTGSEANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAG------SAGAGDDDTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAW--HDARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAATQIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFG--WAFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEGKGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPERGELTDATINSGNKACWAYLEVLEALRHLEDSWGEKEAPAPAHFEEQLMAILPSLV 1013
GYG + + GE ++ +NLDE+V KE+ VY D K G+ LN A VTL V K+ + L L ++ R+E FL+Y+ ETG W F+V+HFSKYG+++ D+E+E +L+K K G + Q+ A + +R + + D D +T E G ED +E L E E E + + G+ ++ + +F ++D+ + + +G + P L G GR+ + + + + + E + P S ++++ +P PS P+ AP P + TL V R E G G +D + F GRSFRVGWGP+ +L G + A K E + P+ +K E P V G+EP T + R +++GL H VD LH A D RQ W L ALW + G + ++D+++ R ++ WL +E+ G + ++ A+ + H I+ A L+ KSG RLA L+ A G K D L Q + ++Q + I+ LL+G + S + LDW R + ++W+ + A SA G ++ R PPLP ++ G +++ + + LL++Y Y L +LD +T + DYRLSW + +L AL+ H +T + +S QL GLW A++VLLH P++ R AV++++ + FL ++L +P W+ A+A +RA +G H +AG L++ +A +I+D L L G PER I + + YL+ + ++ L+D ++ +P + E+L + SL
Sbjct: 739 GYGSVFFSGEVNLTNMNLDEIVHFRRKEIIVYPDDKDKPPAGEGLNGRAEVTLDGVWPNDKTTCSQIKSLERLTEMNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQESDEEDEVPPAKLDLKKLKTGVPPGIPQLPLTQQQMAPQAQSTAVLELLSR-----VSELDSDMADITQEHPADSVLGEEDGERTLEEKLRSETPAEHEPVS---ASSQIASSMGINPHTLQIMKASLFA--DDDECDLFQEHGSSKLIQDVASPKVLLS---GAGRQSIGALLQTKFTSGGGLFSQFPEAPFSGIPQKLS-KSLASESPWPSLGPSFLLPAP------------PPEPTLRTVGARRLGGPVPLESSITLGKGHLLMDAALFRGRSFRVGWGPNWTLV--HCGDQLSVTEAIK-EQSAEIMGFGFLPKPTKSKPITES------PFKVRMEQVVGLEPKQSTESLALYHRP--------LEIGLKHSTINTEDYCPFIQPAKGVDALHGYAEWIMEVNKDIGGGDACLAHWRQVWTLCAALWCRLGDRDV------------------ETEQYSDYQQQLERRRSFSHWLSECAAECIEE--EVGRALQRSNAEAIFRYLTGHCISKACKLSQKSGDHRLALLLSQAVGSKFCRDLLALQLSDWNSMQTDSFIEEDRLRIFALLAGKPVWQSTDSCINVCSELDWKRCVAVHLWYMLPPTASVADALAKYESAFQGSEEVKRYAC-----------PPLPPYVDELELLGLDEEMDETESKKPLYDICFHLLKLYSDRHYSLQQLLDHSTVTADHLDYRLSWHLWNVLQALNYNH--------LSTSCQGLLHASYAAQLESAGLWEMAIFVLLHIPDSGLRESAVREMLNLHCSLEETEESMEKEQFLTEKLLIPIQWIHQAKA--IRA--------CRGGDKRSEALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPER----SVKIQDWDTSGRVYLDYIHVIQTLQDI---QQMESPGYELERLHTEVTSLC 1694 The following BLAST results are available for this feature:
BLAST of EWM30364.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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