EWM27701.1, cds2977 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27701.1 vs. NCBI_GenBank
Match: gi|585109973|gb|EWM27701.1| (hypothetical protein Naga_100104g8 [Nannochloropsis gaditana]) HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 Query: 1 MSWRLLAGGRGRLEWLICLICCFQTASTALAFVCGQGGLLSGLVSKHDRRSSQSTGFREGLPSGLRLHHLPPQGIGRHDETPVVALFSRTVQEDETRGTRVGSNPALTPGKGIRAQRLKDLLLEKELRNDISTAEFALRLDVPRVESEAVDAKVSKSGVGEGRKTPYTPKLKPRGVIDYEKIAEKLEKSLELIDRRQERLSAAVSRDSRLSGNSEGDPASGTHFVGEEAALRVTRRLSETRTELQNVLFRVRASMASAASDGGGKFTSGGGGGSSSSSKGGNSSSAFVGAASGTAAAGGVPGGEESERSLNPLTVFVREDGTVDWDGAFQSGKELAKYSGEVLERLQGKSPGEEAPPAKASTSLATIDSSPGMQLLQRYLQELESELRAAEDERDK 396 MSWRLLAGGRGRLEWLICLICCFQTASTALAFVCGQGGLLSGLVSKHDRRSSQSTGFREGLPSGLRLHHLPPQGIGRHDETPVVALFSRTVQEDETRGTRVGSNPALTPGKGIRAQRLKDLLLEKELRNDISTAEFALRLDVPRVESEAVDAKVSKSGVGEGRKTPYTPKLKPRGVIDYEKIAEKLEKSLELIDRRQERLSAAVSRDSRLSGNSEGDPASGTHFVGEEAALRVTRRLSETRTELQNVLFRVRASMASAASDGGGKFTSGGGGGSSSSSKGGNSSSAFVGAASGTAAAGGVPGGEESERSLNPLTVFVREDGTVDWDGAFQSGKELAKYSGEVLERLQGKSPGEEAPPAKASTSLATIDSSPGMQLLQRYLQELESELRAAEDERDK Sbjct: 1 MSWRLLAGGRGRLEWLICLICCFQTASTALAFVCGQGGLLSGLVSKHDRRSSQSTGFREGLPSGLRLHHLPPQGIGRHDETPVVALFSRTVQEDETRGTRVGSNPALTPGKGIRAQRLKDLLLEKELRNDISTAEFALRLDVPRVESEAVDAKVSKSGVGEGRKTPYTPKLKPRGVIDYEKIAEKLEKSLELIDRRQERLSAAVSRDSRLSGNSEGDPASGTHFVGEEAALRVTRRLSETRTELQNVLFRVRASMASAASDGGGKFTSGGGGGSSSSSKGGNSSSAFVGAASGTAAAGGVPGGEESERSLNPLTVFVREDGTVDWDGAFQSGKELAKYSGEVLERLQGKSPGEEAPPAKASTSLATIDSSPGMQLLQRYLQELESELRAAEDERDK 396
BLAST of EWM27701.1 vs. NCBI_GenBank
Match: gi|299472706|emb|CBN80274.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.1662 bits (165), Expect = 9.166e-9 Identity = 70/273 (25.64%), Postives = 116/273 (42.49%), Query Frame = 0 Query: 108 TPGKGIRAQRLKDLLLEKELRNDISTAEFALRLD-----VPRVESEAVDAKVSKSGVGEGRKTPYTPKLK------------PRGVIDYEKIAEKLEKSLELIDRRQERLSAAVSRDSRLSGNSEGDPASGTHFVGEEAALRVTRRLSETRTELQNVLFRVRASMASAASDGGGKFTSGGGGGSSSSSKGGNSSSAFVGAASGTA--AAGGVPGGEESERSLN-------PLTVFVREDGTVDWDGAFQSGKELAKYSGEVLERLQGKSPGEE 354 T + R QRL+ + K++RN++++AEFAL L+ + + G+ G+ T + ID+E IAE+LE SL + G P S + + +T RL T+++ + + G+ G GG S+ + G + G G++ AGG+ G ++N +FVR+DGTVDWDGA QSG+E+A++ E+ +R+ G++P EE Sbjct: 38 TANRTERGQRLRAVNWVKQVRNELTSAEFALNLNGATRGMSTGGGGGGGGGGTPPGIN-GQSTSPGAPSSSAAPAGAGATPGSKSEIDFETIAERLEASLRAL--------------------QAGRPLSLLEAISPDELREITARLKVNLTKIKKI------------TQAEGRSRDGTGGDSAGARSAGEA-----GGEEGSSWRDAGGILGEMTEGINVNLKDVKVPEFDLFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQNPDEE 272 The following BLAST results are available for this feature:
BLAST of EWM27701.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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