EWM27681.1, cds2975 (CDS) Nannochloropsis gaditana

Overview
NameEWM27681.1
Unique Namecds2975
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:417777..417810 +
Alignment locationCM002460.1:417958..418069 +
Alignment locationCM002460.1:418396..418499 +
Alignment locationCM002460.1:418592..418716 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27681.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100104g6.5944.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:417777..417810 +
CM002460.1supercontigCM002460.1:417958..418069 +
CM002460.1supercontigCM002460.1:418396..418499 +
CM002460.1supercontigCM002460.1:418592..418716 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27681.1 vs. NCBI_GenBank
Match: gi|585109953|gb|EWM27681.1| (hypothetical protein Naga_100104g6 [Nannochloropsis gaditana])

HSP 1 Score: 257.299 bits (656), Expect = 5.814e-87
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 
Query:    1 MLERSTRPRAPNSPITKRAMPNWWNLPFRDFVVKEVMRPGFREFAVGAAVVFFGLGLKINAGITDKDREESPYYQDFLAPKKEGPHGFSCLRGVDLTRSRGDLCAAWAVCATGFCFPKEEKWGS 124
            MLERSTRPRAPNSPITKRAMPNWWNLPFRDFVVKEVMRPGFREFAVGAAVVFFGLGLKINAGITDKDREESPYYQDFLAPKKEGPHGFSCLRGVDLTRSRGDLCAAWAVCATGFCFPKEEKWGS
Sbjct:    1 MLERSTRPRAPNSPITKRAMPNWWNLPFRDFVVKEVMRPGFREFAVGAAVVFFGLGLKINAGITDKDREESPYYQDFLAPKKEGPHGFSCLRGVDLTRSRGDLCAAWAVCATGFCFPKEEKWGS 124
The following BLAST results are available for this feature:
BLAST of EWM27681.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109953|gb|EWM27681.1|5.814e-87100.00hypothetical protein Naga_100104g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2983rna2983Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications