EWM27720.1, cds2964 (CDS) Nannochloropsis gaditana

Overview
NameEWM27720.1
Unique Namecds2964
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:389564..392122 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27720.1
Productdna-damage-inducible protein f
Orig transcript idgnl|cribi|Naga_100034g7.6293.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:389564..392122 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0042221response to chemical
GO:0055085transmembrane transport
GO:0006855drug transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015238drug transmembrane transporter activity
GO:0015297antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE
Homology
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|585109993|gb|EWM27720.1| (dna-damage-inducible protein f [Nannochloropsis gaditana])

HSP 1 Score: 1722.21 bits (4459), Expect = 0.000e+0
Identity = 852/852 (100.00%), Postives = 852/852 (100.00%), Query Frame = 0
Query:    1 MVLSGCKERHGGYNNLRKLSLRRHQHCSPSSSAQVTPPIGSDSIAFMKALSCFRLVLGLVAVNAFRFTYKTRVAKAKGSRMPVFSFNEKSTPGTTLGTESDRPRAQGSSGVLRLKKLLQRRLLFVVETLGGIDRAALYLTRRDLAGDGLELFPAAVFPAAEDDWMIGHVGAIQPKKKLYRNGNGATPPTFFLASGELAVRICYGAQLIAVLVVDDEEHRKTRMKPTGDARGETGLQRSAVRMHRIEEVATRVFAAALKDTLVIDQRALALNSSSSTFVRTEVLPFIGTVPDASEGLLSGKPADASSSNGSEAEQADEAAAEAGAWAVNAEASTSSLLSSDVTVSVGGATNITFDLHLLEDFKHIFDDIQLSGLRLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAVPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSAGLFLTKFVSMKPPILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLRDEGLTAVWETLLAFQVMRAVLFAYRFVEPMGPLSIVSESKTQKILAGSLFRGWDHDKHVPKKKKKKRRRPWFNDM 852
            MVLSGCKERHGGYNNLRKLSLRRHQHCSPSSSAQVTPPIGSDSIAFMKALSCFRLVLGLVAVNAFRFTYKTRVAKAKGSRMPVFSFNEKSTPGTTLGTESDRPRAQGSSGVLRLKKLLQRRLLFVVETLGGIDRAALYLTRRDLAGDGLELFPAAVFPAAEDDWMIGHVGAIQPKKKLYRNGNGATPPTFFLASGELAVRICYGAQLIAVLVVDDEEHRKTRMKPTGDARGETGLQRSAVRMHRIEEVATRVFAAALKDTLVIDQRALALNSSSSTFVRTEVLPFIGTVPDASEGLLSGKPADASSSNGSEAEQADEAAAEAGAWAVNAEASTSSLLSSDVTVSVGGATNITFDLHLLEDFKHIFDDIQLSGLRLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAVPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSAGLFLTKFVSMKPPILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLRDEGLTAVWETLLAFQVMRAVLFAYRFVEPMGPLSIVSESKTQKILAGSLFRGWDHDKHVPKKKKKKRRRPWFNDM
Sbjct:    1 MVLSGCKERHGGYNNLRKLSLRRHQHCSPSSSAQVTPPIGSDSIAFMKALSCFRLVLGLVAVNAFRFTYKTRVAKAKGSRMPVFSFNEKSTPGTTLGTESDRPRAQGSSGVLRLKKLLQRRLLFVVETLGGIDRAALYLTRRDLAGDGLELFPAAVFPAAEDDWMIGHVGAIQPKKKLYRNGNGATPPTFFLASGELAVRICYGAQLIAVLVVDDEEHRKTRMKPTGDARGETGLQRSAVRMHRIEEVATRVFAAALKDTLVIDQRALALNSSSSTFVRTEVLPFIGTVPDASEGLLSGKPADASSSNGSEAEQADEAAAEAGAWAVNAEASTSSLLSSDVTVSVGGATNITFDLHLLEDFKHIFDDIQLSGLRLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAVPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSAGLFLTKFVSMKPPILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLRDEGLTAVWETLLAFQVMRAVLFAYRFVEPMGPLSIVSESKTQKILAGSLFRGWDHDKHVPKKKKKKRRRPWFNDM 852          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|224007112|ref|XP_002292516.1| (mate efflux protein, multi antimicrobial extrusion family [Thalassiosira pseudonana CCMP1335] >gi|220972158|gb|EED90491.1| mate efflux protein, multi antimicrobial extrusion family [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 237.269 bits (604), Expect = 2.519e-65
Identity = 172/502 (34.26%), Postives = 264/502 (52.59%), Query Frame = 0
Query:  359 EDFKHIFDDIQL------SGLRLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFL---GSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAV---PENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPK-GLGAAGAATVIAEWLSAGLFLTKFVSMKPP--------------ILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARI----------GPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLR-----------DEGLTAVWETLLAFQVMRAVLFAYRFVEPMGPLSI 812
             D + +  D+++      S   L  NT+  IL +A P + +LA++PL+++ DT ++G +        L+  G +  + VFS Y+ NFLAT+T P+VAN RA  +E+ ARE+ G+ L  A   G  L  +L     PL+ ++G      E+YAE  ++  VR+   PA+++ + SNG LRGYLDT TP +V   + +V+  +D  VV  A+ K G   AG AT +AEW++A  FL       P               I PVL L P W ++ P+V AS+ +F+R+++LQ  ++++   AAR               +AAHQ+ALQLW+  SFL +A + A+Q LVAD +GRGD    R +S  + +WG+ LG  L+             L  FFT D+G   ++  ++ ++   QP+N  V    GVLQGA++FTYQ  +M +S   A   F  +            ++ L  VW  L+A Q MRA+    +  E  GP+ I
Sbjct:   13 HDEQELLVDLEIEEGSNSSDASLSPNTSQQILNLAVPALISLAIDPLMTIADTAFVGRYSPPNDPYPLAGLGSAAALLVFSFYVFNFLATATAPLVANRRAALDEKGAREVGGQALSLALALGSILAVVLLIFRAPLLEVMGTGVTGAESYAE--QFLVVRALAAPAVLICSASNGVLRGYLDTKTPTLVLLGSNVVNLMLD--VVLVANMKMGPMGAGIATTVAEWIAALCFLGVLGGKLPSADGDLGSNSRDDATIFPVLTL-PKWQDVRPLVVASSSVFLRSIVLQIAMSSAAAMAARTTVESGLTEAGASSSVAAHQIALQLWLLCSFLCDALATASQALVADGIGRGDPKAVRGVSQTVFQWGLVLGLTLSACLWIGT--SSGFLIDFFTSDEGTRIELGKLLTIVICAQPLNSFVFAADGVLQGAEEFTYQAKSMVVSVATAIGAFAAIEYTPFVAMLVGDNDTLVNVWFGLIALQSMRALTSFVKLAEEDGPIDI 507          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|1210516880|dbj|GAX24369.1| (hypothetical protein FisN_4Lh494 [Fistulifera solaris])

HSP 1 Score: 232.261 bits (591), Expect = 9.517e-64
Identity = 168/463 (36.29%), Postives = 249/463 (53.78%), Query Frame = 0
Query:  376 ENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGS-VSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGA-----VPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAA--TVIAEWLSAGLFLTKFVSMKPP---------ILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARI----GPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLRDEG-----LTAVWETLLAFQVMRAVLFAYRFVEPMGPLSI 812
            + +T   IL +A P  AAL ++PL++L DT ++G F  S V L+  G +  +  FS Y+ NFL T+TTP+VA+ RA G+ + A  +  + L  + + G  L   L +L   L+ ++G      +   YA A  +  VR+   PA++ +  S G LRGYLDT TP+++  +A +++ ++D  ++  A   GLG  GAA  T  AEW+SA LFL       P          I P L + P W E+ P++ ASA +F R V+LQ  L+ +   AAR       + +AAHQ+ +QLWI  SF  ++ + A+QGLVADALGR D    RE+S  +  + + LG  L +     +     +L   FT+D  I   +H I+ LI I QP+N +V    GVLQGA +FT+Q   M LS L A S F  L         L  VW  L+A Q MR +   ++  +  GP++I
Sbjct:   31 QQSTGRKILDLAIPAGAALLIDPLMTLADTAFVGRFADSPVELAGMGSAVPILTFSFYLFNFLCTATTPLVASRRAAGKPKDAAAVGAQALTLSLVLGATLTITLLSLKQTLLIVMGTGITGELANKYALA--FLSVRALAAPAVLCIEASTGVLRGYLDTRTPIVILIVANLLNLALDIVLIAFA---GLGPMGAAIATTTAEWVSALLFLGVLSGTIPSASSSVEAVEIRPSLSI-PTWQEVRPLIVASASVFFRAVVLQVSLSGAAAMAARSVSDEAAVAVAAHQIGIQLWILCSFFCDSLAAASQGLVADALGRKDPDGVREVSKTVFAYSLCLGLFLGLLLQAGE--ATGLLFEIFTDDNSIQGALHKILPLIVIAQPLNAMVFAADGVLQGASEFTFQAKAMALSGLTALSTFAWLEMGNADVATLVHVWTALIALQSMRGLTSLWKVAQKDGPINI 485          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|219128065|ref|XP_002184243.1| (multi antimicrobial extrusion family protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404474|gb|EEC44421.1| multi antimicrobial extrusion family protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 227.639 bits (579), Expect = 4.195e-62
Identity = 162/463 (34.99%), Postives = 247/463 (53.35%), Query Frame = 0
Query:  378 NTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVS-LSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAV---PENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSAGLFLTKFVSMKP---------PILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARI-------GPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLL-----RDEGLTAVWETLLAFQVMRAVLFAYRFVEPMGPLSIVSE 815
            +T   IL +A P  AAL ++PL++L DT ++GHF  +   L+  G +  +  FS Y+ NFL T+TTP+VA  RA G+++ A  L G+ L  A   G  L   L     PL+ L+G     P   A A+ +  VR+   PA++ +  S G LRGYLDT TP+ +  +A IV+  +D  ++  A    +GAA  AT  AEW+SAGLFL       P          ILP   + P W ++ P++ AS+  F R+++LQ  ++ +   AAR            +AAHQ+ +QLW+  SF  ++ + A+QGLVADALGR DR    +++  +  + + LG  LA      +      L   FT+D    + +  I+ LI + QP+N LV    G+LQGA +F +Q   M LS L A S F +L       + L  +W  L+A Q MR +   Y+ V+  GP++++++
Sbjct:   33 STGAQILDLAIPAGAALLIDPLMTLADTAFVGHFSDTADQLAGMGSAAALLTFSFYLFNFLCTATTPLVAAKRASGQQDEAIALGGQALSLALSLGGLLTVGLWTFRQPLLTLMGTGSTGPAANAYAMAFLSVRALAAPAVLSIEASVGVLRGYLDTKTPIAILIVANIVNLFLDVALIAFAGMGPMGAA-IATTTAEWISAGLFLGVLAGRLPAAAGQLSGVSILPARSI-PSWIDIQPLIVASSSAFFRSLVLQLSISAAAAMAARGGADMDTGAAASVAAHQIGIQLWLLCSFFCDSLAAASQGLVADALGRADRGDVLDVTKTVFAYSLGLGIFLATLLQVGE--STSWLFDLFTQDPSTREALSEILPLIVLAQPLNALVFAADGILQGANEFPFQAKAMALSGLSAVSTFVVLDMAAPNVDTLVHIWTALIALQAMRGMTSLYKLVDRSGPINLLAD 491          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|299473235|emb|CBN77635.1| (mate efflux protein, multi antimicrobial extrusion family [Ectocarpus siliculosus])

HSP 1 Score: 221.09 bits (562), Expect = 5.020e-60
Identity = 149/386 (38.60%), Postives = 213/386 (55.18%), Query Frame = 0
Query:  383 ILQVAAPVVAALALEPLISLVDTYYIG-----HFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAVPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSAGLFLTKFVSMKPPILPVLDLFPP----WAEMAPVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALG-GVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQ 758
            IL +A P + AL+++PL+S VDT YIG     H  G + L A  ++  VF FS YI NFLAT  TP VA+ RA+G+E+ A  L+G+LL  A   G+ L+ +L+     L+ LLGA   N  +                          G+LDT TPL++   A  +++ +DP +++     GL  A  ATV AEW     FL      +P I       P     W E + V+ +SA +F RTV LQ  L T+   AAR+GP  IAAHQV  QL++  +F  ++ ++AAQGLVAD LG G    GRE++  L+ +G+ LG G L +F    Q+    VLP  FT DQ ++  + P++ ++ ++QP+NG V VG G+LQG QDF Y+
Sbjct:  104 ILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVLLEFFGVHLLQLLGATAVNEDQ--------------------------GFLDTKTPLLIGLAANGLNFVLDPILIFQFG-WGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIF----QVFG-GVLPLIFTSDQKVIAAIAPVIAVVGLLQPLNGYVFVGDGILQGTQDFVYE 457          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|1210515048|dbj|GAX26011.1| (hypothetical protein FisN_4Hh494 [Fistulifera solaris])

HSP 1 Score: 221.09 bits (562), Expect = 9.012e-60
Identity = 165/463 (35.64%), Postives = 247/463 (53.35%), Query Frame = 0
Query:  376 ENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGS-VSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGA-----VPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAA--TVIAEWLSAGLFLTKFVSMKPP---------ILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAA----HQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLRDEG-----LTAVWETLLAFQVMRAVLFAYRFVEPMGPLSI 812
            + +T   IL +A P  AAL ++PL++L DT ++G F  S V L+  G +  +  FS Y+ NFL T+TTP+VA+ RA G+ + A  +  + L  + + G  L   L +L   L+ ++G      +   YA A  +  VR+   PA++ +  S G LRGYLDT TP+++  +A +++ ++D  ++  A   GLG  GAA  T  AEW+SAGLFL       P          I P L + P W E+ P++ ASA +F R V+LQ  L+ +   AAR    + A     HQ+ +QLWI  SF  ++ + A+QGLVADALGR D    RE+S  +  + + LG  L +     +     +L   FT+D  I   +H I+ LI I QP+N +V    GV+QGA +FT+Q   M LS L A S F  L         L  VW  L+A Q MR +   ++  +  G +++
Sbjct:   31 QQSTGRKILDLAIPAGAALLIDPLMTLADTAFVGRFADSPVELAGMGSAVPILTFSFYLFNFLCTATTPLVASSRAAGQAKEAAAVGAQALTLSLVLGATLTITLLSLKQTLLTVMGTDITGEIANGYALA--FLSVRALAAPAVLCIEASTGVLRGYLDTRTPIVILIVANLLNLALDIVLIAFA---GLGPMGAAIATTTAEWVSAGLFLGVLSGTIPSASSSVDAIEIRPSLSI-PTWQEVRPLIVASASVFFRAVVLQVSLSGAAAMAARSVSEEAAVAVAAHQIGIQLWILCSFFCDSLAAASQGLVADALGRKDPDGVREVSRTVFAYSLCLGLFLGLLLQVGE--ATGLLFEIFTDDDSIQAALHKILPLIVIAQPLNAMVFAADGVIQGASEFTFQAKAMALSGLTAVSTFVWLEMGNADVATLVHVWTALIALQSMRGLTSLWKLAQKDGTINL 485          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|397579807|gb|EJK51342.1| (hypothetical protein THAOC_29490 [Thalassiosira oceanica])

HSP 1 Score: 215.312 bits (547), Expect = 2.984e-57
Identity = 158/464 (34.05%), Postives = 248/464 (53.45%), Query Frame = 0
Query:  396 LEPLISLVDTYYIGHFLGSVS---LSAYGISERVFVFSLYILNFLATS-TTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAV---PENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSAGLFL-----------TKFVSMKPPILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAA-------RIGP-LDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKW----GVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLR-------------DEGLTAVWETLLAFQVMRAVLFAYRFVEPMGPLSIVSES 816
            ++PL+++ DT ++G +        L+  G +  + VFS Y+ NFLAT+ T+P+VAN RA G+E  A ++ G+    A + G+ L  +L     PL++L+G     P+  + A ++  VR+   PA++L + SNG +RGYLDT TP I+   + +V+  +D  +V       +GA G AT +AEWL+A  FL                 K  I PVL+L P W ++ P+  AS+ + +R++ LQ  ++++   AA         GP   +AAHQVALQLW+  SFL +A + A+Q LVAD LGR DR   R++S  +  W    G+AL G+L +  A+        L  FFT D+G   ++  ++ ++ + QP+N  V    GVLQGA++FTYQ   M LS   A  LF  L+              + L  VW  L+  Q MR +    + V+  GP+++  ++
Sbjct:   65 IDPLMTIADTAFVGRYSAPNDPDPLAGLGSAAALLVFSFYVFNFLATAATSPLVANRRASGDEAGAIQVGGQAQSLAVVLGITLCLVLLIYREPLLHLMGTGVTGPQADSYAQQFLVVRALAAPAVLLCSASNGIMRGYLDTKTPTIILLCSNVVNLLLDVVLVANLGMGPMGA-GIATTVAEWLAALSFLGVISGRIPRAGADLQGEKMSITPVLEL-PKWVDIKPLFVASSAVLLRSLSLQLAMSSAAAMAARSSGVMESTGPSASVAAHQVALQLWLLCSFLCDALATASQALVADGLGRDDRRAVRDISQTVFNWSLALGLALSGILWIGTASG------FLTDFFTSDEGTRIELGKLLTIVILAQPLNSFVFAADGVLQGAEEFTYQAKAMALSVASAFGLFVFLQYTTFAQDIILGGESDALLNVWYGLIMLQFMRGLTSLIKIVDRDGPIALFGKA 520          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|551665997|ref|XP_005835760.1| (hypothetical protein GUITHDRAFT_68515 [Guillardia theta CCMP2712] >gi|428179911|gb|EKX48780.1| hypothetical protein GUITHDRAFT_68515 [Guillardia theta CCMP2712])

HSP 1 Score: 209.149 bits (531), Expect = 3.397e-56
Identity = 146/439 (33.26%), Postives = 239/439 (54.44%), Query Frame = 0
Query:  383 ILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAVPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSAGLFLTKFVSMKPPILPVLDLFPPWAEM-----APVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAV-FCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLRDEGLTAVWETLLAFQVMRAVLFAYRFV---EPMGPLSI 812
            I  +A P + +LA++PL+ LVDT Y+G       L+A G+   +F ++ +I NF AT+TTP+++   A GE+E A E + + L  A + G++ + +L+  S+ +I  +G                           + NGA RG  DT TPL++  +A +V++ +DP  +Y  +      AG AT IAEW+SAGLF+      +     ++ +  P + +      P++ AS  +F+R++ LQ++L  +   AAR G   +AAHQV LQ+W+  SF  ++ ++AAQ L+A+ LG+G +   R ++  L      +G +L + F A++       LP+ FT D  + + V  ++  I++MQPIN LV VG G+LQG++DF +    M ++A  A SL  LL  EG+  VW  L+  QVMRA    +R+       GPL++
Sbjct:   14 IFSLAIPALGSLAIDPLLGLVDTLYLGRIPSPSPLAALGVCSSIFNYAFFIFNFFATATTPLISRALAAGEKEEAAETLAQALTAAALLGVSTVGLLEFFSHGIIESMG--------------------------TIGNGAFRGLQDTRTPLLILLVANLVNFVLDPLFIYGVNIN--SGAGLATAIAEWISAGLFMGTLRQREAVTSSLMSM--PASRLHGRDEHPLLVASGAVFLRSIALQSVLTFATSQAARTGTEAVAAHQVGLQVWLLMSFAVDSLAVAAQTLIAEELGKGSKRDARVIADRLTTLAAQIGLLLMLAFLASSSF-----LPKVFTADAKVDEIVQHLLLYISVMQPINALVFVGDGILQGSEDFAFLTKAMFVAA--ASSLLVLLAGEGIDGVWSGLVVLQVMRAAGLGWRYYGGKAAGGPLNV 415          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|502944447|ref|WP_013179423.1| (MATE family efflux transporter [Truepera radiovictrix] >gi|297166353|gb|ADI16064.1| MATE efflux family protein [Truepera radiovictrix DSM 17093])

HSP 1 Score: 202.216 bits (513), Expect = 1.574e-53
Identity = 150/385 (38.96%), Postives = 218/385 (56.62%), Query Frame = 0
Query:  383 ILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAVPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSA-GLFLTKFVSMKPPILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSA 766
            IL +A P +  LA +PL+SLVDT ++G  LGSV L+A G++  +F  +  + NFLA  TTP+VA    +G+ EAA   V + L  A + G   +  LQ  + PL+ L+GA  E    A+ Y +VR+   PAL+L+   NGA RGY DT TP ++     +V+ ++DP  ++     GL  A  ATV+A+W  A G     F   +   L +    P +AE+ P V+   ++ +RT  L + L  +   A R+G L++AAHQVA QLW+  + + +A ++AAQ LVA   G G  LR R ++  LL WG  +G VLA   A    L   VLPR FT+D  ++  V  +   +A+MQP+N LV V  GVL G +DF Y  + M +SA
Sbjct:   14 ILALALPALGTLAADPLVSLVDTAFVGR-LGSVPLAALGVNTALFSLAFVVFNFLAYGTTPMVARSLGRGDREAAGRAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGEELVGPALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIF-GFGWGLAGAAWATVVAQWAGALGFVWVLFARRRA--LGISVALPRFAELRPFVRVGWELLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWLFLALVVDALAVAAQALVARYRGAGQPLRARAVADRLLAWGFGVGLVLAAGFA----LFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRYLALAMLVSA 390          
BLAST of EWM27720.1 vs. NCBI_GenBank
Match: gi|551208052|ref|WP_022836102.1| (MATE family efflux transporter [Salisaeta longa])

HSP 1 Score: 176.792 bits (447), Expect = 2.066e-44
Identity = 155/442 (35.07%), Postives = 230/442 (52.04%), Query Frame = 0
Query:  370 LSGLRLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAVPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLG----AAGAATVIAEWLSAGLFLTKFVSMKPPILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLR--DEGLTAVWETLLAFQVMRAVLFAYRFVE 805
            +  L L ++ +  I  +A P +A LA  PL++LVDT ++G  LG V+L A GI+  +F  +  I NFLA  TTP V     +G+   A  +V R L  A   G   +  LQ L+ PL+ L+GA       A+ Y ++R+   PA++L+   NGA RGY DT TP+ +     +++  +DP +++     GLG     A  AT  A+W  A +F    ++ +   L +   +P    + P +K    +F+RT  L   +  +   AARIG   +AAHQVA QLW+  + + +A ++A Q LV+  +GRGD    R +   LL WG+ +G  L V  A   +LQP VLP FFTED   +  V  +   +A +QP+NGLV V  G+  GA+ F Y    M  S   A ++  L R    GL  VW  L A  ++RA   A  +V 
Sbjct:    1 MHALSLRHSHDRAIFDLAVPALAGLAAGPLVTLVDTAFVGQ-LGPVALGALGINASLFSMTFVIFNFLAYGTTPRVGRALGEGDRAEAGRVVLRALVLALGAGAVALAALQLLARPLLALMGAGERLMEPALTYLRIRACAGPAVLLITAGNGAFRGYQDTRTPMAITVGFNLINLVLDPLLIF-----GLGWGLAGAALATAGAQWTGALIFWWLLLNTRREALGIPHTWPSLRSLWPFLKIGRDLFLRTAALIGTMTLATAVAARIGVTAVAAHQVAAQLWLFLALVVDALAVAGQALVSKHVGRGDVAAARSVGNRLLVWGLVVGCGLGVGFA---LLQP-VLPAFFTEDPATIALVLTVFPFVAALQPLNGLVFVADGLYMGAERFGYLAKAMLASTAVAAAVLLLTRPLGWGLAGVWWGLTALMLVRAGTLAVPYVR 432          
The following BLAST results are available for this feature:
BLAST of EWM27720.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109993|gb|EWM27720.1|0.000e+0100.00dna-damage-inducible protein f [Nannochloropsis ga... [more]
gi|224007112|ref|XP_002292516.1|2.519e-6534.26mate efflux protein, multi antimicrobial extrusion... [more]
gi|1210516880|dbj|GAX24369.1|9.517e-6436.29hypothetical protein FisN_4Lh494 [Fistulifera sola... [more]
gi|219128065|ref|XP_002184243.1|4.195e-6234.99multi antimicrobial extrusion family protein [Phae... [more]
gi|299473235|emb|CBN77635.1|5.020e-6038.60mate efflux protein, multi antimicrobial extrusion... [more]
gi|1210515048|dbj|GAX26011.1|9.012e-6035.64hypothetical protein FisN_4Hh494 [Fistulifera sola... [more]
gi|397579807|gb|EJK51342.1|2.984e-5734.05hypothetical protein THAOC_29490 [Thalassiosira oc... [more]
gi|551665997|ref|XP_005835760.1|3.397e-5633.26hypothetical protein GUITHDRAFT_68515 [Guillardia ... [more]
gi|502944447|ref|WP_013179423.1|1.574e-5338.96MATE family efflux transporter [Truepera radiovict... [more]
gi|551208052|ref|WP_022836102.1|2.066e-4435.07MATE family efflux transporter [Salisaeta longa][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2972rna2972Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications