EWM27727.1, cds2956 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|585110000|gb|EWM27727.1| (ohcu decarboxylase [Nannochloropsis gaditana]) HSP 1 Score: 411.764 bits (1057), Expect = 1.144e-145 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 Query: 1 MDMRAEDQQQMQDGIAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLLTFLGTREDSSRL 198 MDMRAEDQQQMQDGIAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLLTFLGTREDSSRL Sbjct: 1 MDMRAEDQQQMQDGIAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLLTFLGTREDSSRL 198
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|502458063|ref|WP_012794336.1| (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [Chitinophaga pinensis] >gi|256040629|gb|ACU64173.1| OHCU decarboxylase [Chitinophaga pinensis DSM 2588]) HSP 1 Score: 155.606 bits (392), Expect = 8.085e-45 Identity = 80/173 (46.24%), Postives = 112/173 (64.74%), Query Frame = 0 Query: 15 IAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLLT 187 + LNA+P L L + CG+ +W++ + FP S+LTA R W S + D+ EAFA HP+IGD +L+ KFA A+G+ W EQ GA A+ LQ+L N+LYE++FG+IF+VCATGK+A EML+IL +R++NE E+ +A GEQ KITA+RL KLL+ Sbjct: 3 LTALNALPPEQLNEALGKCCGATAWIQKMTNEFPVKDEDSLLTAAARNWQSCTESDWKEAFAHHPKIGDLHSLQHKFA----ATGQ----WATGEQAGAVDASTVILQALSKGNKLYEDKFGYIFIVCATGKSAPEMLSILTERLKNEEGEEIKIAMGEQEKITAIRLKKLLS 167
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|648570508|ref|WP_026262259.1| (OHCU decarboxylase [Spirosoma panaciterrae]) HSP 1 Score: 154.451 bits (389), Expect = 2.225e-44 Identity = 76/172 (44.19%), Postives = 109/172 (63.37%), Query Frame = 0 Query: 15 IAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLL 186 +++LN + A+LR L CGS +WV ++K FP S ++ + W+ S D+ EAF HP+IGD ++L+ K+A K W + EQ G GA+E L+ L NRLYE +FG+IF+VCATGK+A+EMLAIL+ R+ + P E+++A EQNKIT +RL KLL Sbjct: 3 LSELNELSGAELRAALTTCCGSSNWVAEMVKIFPADSRETVTRQAEIIWFGCSETDWKEAFEQHPKIGDIDSLRSKYANTRK--------WASGEQSGVAGASETILERLSEGNRLYEAKFGYIFIVCATGKSAEEMLAILESRLPHSPGEEILVAMQEQNKITKIRLDKLL 166
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|1056061228|ref|WP_067586926.1| (OHCU decarboxylase [Endozoicomonas ascidiicola]) HSP 1 Score: 154.066 bits (388), Expect = 2.971e-44 Identity = 73/174 (41.95%), Postives = 109/174 (62.64%), Query Frame = 0 Query: 15 IAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLLTF 188 ++ LNA+ V D + + C S SW++ ++++ P + +LT D W + D+L+AF HP+IGD +LK+K+A + +G EQ G AN+ LQ+L N+ YE RFG+IF+VCATGK+ADEML +LQ R+ N EL++AA EQ+KIT +RL+KL+T Sbjct: 3 LSDLNALAVVDASSLFRQCCTSESWIQGMVQSRPFANVEGLLTVADELWAKCDQSDFLQAFDGHPKIGDVSSLKEKYANTQQMAGH--------EQSGVNAANDDVLQALAEGNKEYEARFGYIFIVCATGKSADEMLGLLQSRLINNVDEELVVAAAEQHKITRIRLNKLVTL 168
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|1100027171|emb|SFB93023.1| (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [Spirosoma endophyticum]) HSP 1 Score: 154.066 bits (388), Expect = 3.050e-44 Identity = 77/173 (44.51%), Postives = 105/173 (60.69%), Query Frame = 0 Query: 15 IAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLLT 187 + +LN +P+ L+ L CGS +WV + K FP S S+ + W++ S D+ EAF HP+IGD +L+ KFAT W A EQ G A+ + L+ L NR YEE+FG+IF+VCATGK+ADEML +L R+ N P E+++A EQNKIT +RL KLLT Sbjct: 3 LPELNQLPLPQLKEALATCCGSTAWVNELAKIFPVESKESLFEQAEIIWFACSESDWREAFTHHPKIGDISSLRDKFATTK--------AWAAGEQSGVSVASLQVLEDLSEGNRRYEEKFGYIFIVCATGKSADEMLDLLNARLSNSPETEILIAMQEQNKITKIRLEKLLT 167
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|1181032671|ref|WP_084444240.1| (OHCU decarboxylase [Hymenobacter roseosalivarius] >gi|1174200553|emb|SMB88245.1| OHCU decarboxylase [Hymenobacter roseosalivarius DSM 11622]) HSP 1 Score: 153.295 bits (386), Expect = 5.142e-44 Identity = 75/172 (43.60%), Postives = 108/172 (62.79%), Query Frame = 0 Query: 15 IAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLL 186 +A+LNA+P L L + CGS +WVE++ + FP ++ W+ LS D+ EAF HP+IGD +LK+KFA+ W A EQ + +++ L++L N YE++FG+IF+VCATGK+A +MLA+LQ R+ NEPA E+ +A GEQ KIT +RL KLL Sbjct: 3 LAELNALPTPALTETLRKCCGSTAWVEAMTRVFPVADLETLFEQASTIWYGLSEHDWREAFTHHPKIGDINSLKEKFASTS--------AWAAGEQAAVQHSSQAVLEALAEGNTCYEQKFGYIFIVCATGKSAAQMLALLQARLPNEPAAEIKLARGEQAKITQIRLEKLL 166
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|1167624778|ref|WP_080056626.1| (OHCU decarboxylase [Spirosoma aerolatum]) HSP 1 Score: 152.14 bits (383), Expect = 1.445e-43 Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 0 Query: 15 IAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLL 186 + +LN PV++L+ L CGS +WV ++K FP S ++ + W++ S D+ EAFA HP+IGD +L+ KF + W +DEQ G A+E LQ L NRLYEE+FG+IF+VCATGK+A EML L+ R+ + P E+ +A EQNKIT +RL KLL Sbjct: 3 LPELNDAPVSELKAALATCCGSSTWVNDMVKLFPVDSRETLFEQAEMVWFACSEADWKEAFAHHPKIGDINSLRSKFTSTRN--------WASDEQSGVADASEVVLQRLAEGNRLYEEKFGYIFIVCATGKSAVEMLNSLESRLPHSPEEEIKIAMQEQNKITKIRLEKLL 166
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|1113409103|gb|OJW71700.1| (OHCU decarboxylase [Spirosoma sp. 48-14]) HSP 1 Score: 152.14 bits (383), Expect = 1.629e-43 Identity = 76/172 (44.19%), Postives = 109/172 (63.37%), Query Frame = 0 Query: 15 IAKLNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLL 186 + +LN PV++L+ L CGS +WV+ ++K FP S ++ + W++ S D+ EAFA HP+IGD +L+ KFA+ W + EQ G A+E+ L+ L NRLYEE+FG+IF+VCATGK+A EML IL+ R+ + P E+ +A EQNKIT +RL KLL Sbjct: 3 LPELNEAPVSELKAALTACCGSSAWVKDMVKLFPVDSRETLFEQAEMIWFACSEADWKEAFAHHPKIGDIGSLRSKFASTRN--------WASGEQSGVAEASEEILRRLAEGNRLYEEKFGYIFIVCATGKSASEMLNILESRLPHSPEKEIQIAMQEQNKITKIRLEKLL 166
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|763122560|ref|WP_044002472.1| (OHCU decarboxylase [Hymenobacter swuensis] >gi|586956515|gb|AHJ98249.1| hypothetical protein Hsw_2654 [Hymenobacter swuensis DY53]) HSP 1 Score: 152.14 bits (383), Expect = 1.836e-43 Identity = 80/169 (47.34%), Postives = 104/169 (61.54%), Query Frame = 0 Query: 18 LNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLL 186 LN + + EL R CGS +WVE + + FP A++ A R W LS D+ EAFA HP+IGD AL++KFA+ W EQ A+E TLQ+L N YE+RFG+IF+VCATGK+A EMLA+LQ R+ N P E+ +AA EQ+KIT +RL KLL Sbjct: 6 LNNLSASARAEELRRCCGSSAWVEGLSQQFPFADTATLYQAATRTWNHLSEADWREAFAHHPKIGDVGALREKFASTS--------TWAEGEQGAVRLASEDTLQALAAGNAAYEQRFGYIFIVCATGKSAAEMLALLQARLPNPPEQEIGVAAAEQDKITRIRLEKLL 166
BLAST of EWM27727.1 vs. NCBI_GenBank
Match: gi|1090780328|emb|SEF83208.1| (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [Marinobacterium lutimaris]) HSP 1 Score: 151.754 bits (382), Expect = 2.399e-43 Identity = 76/169 (44.97%), Postives = 107/169 (63.31%), Query Frame = 0 Query: 18 LNAMPVADLRTELLRICGSVSWVESVIKTFPHTSAASILTAMDRAWWSLSRPDYLEAFAAHPRIGDGEALKKKFATVPKASGKAGPVWEADEQKGAEGANEKTLQSLVVHNRLYEERFGHIFLVCATGKTADEMLAILQDRMRNEPAYELIMAAGEQNKITALRLHKLL 186 N +P A+ L + C + W+E +++ P A ++ +R W LS PDYLEAF HP+IGD +LKKK+A+ + + A EQ GA A+++ L++L N YE+RFG IF+VCATGK+A+EMLA+LQ R+ N+ EL +AAGEQ KIT LRL K+L Sbjct: 6 FNKLPAAECENALNQCCVATRWIEQMLQARPFADAEALFETAERVWAGLSMPDYLEAFEGHPKIGDVSSLKKKYASTKQLA--------AGEQSGASVASDEVLRALAEGNDEYEQRFGFIFIVCATGKSAEEMLALLQARLGNDLMTELNIAAGEQAKITRLRLEKML 166 The following BLAST results are available for this feature:
BLAST of EWM27727.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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