EWM27749.1, cds2951 (CDS) Nannochloropsis gaditana

Overview
NameEWM27749.1
Unique Namecds2951
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:359125..359676 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27749.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100034g21.6322.mrna
GbkeyCDS
Notelike dehydratase
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:359125..359676 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029069HotDog_dom
IPR002539MaoC_dom
Homology
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|585110022|gb|EWM27749.1| (hypothetical protein Naga_100034g21 [Nannochloropsis gaditana])

HSP 1 Score: 369.007 bits (946), Expect = 3.392e-129
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNSPVVQEALQSKL 183
            MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNSPVVQEALQSKL
Sbjct:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNSPVVQEALQSKL 183          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|301101646|ref|XP_002899911.1| (peroxisomal hydratase-dehydrogenase-epimerase, putative [Phytophthora infestans T30-4] >gi|262102486|gb|EEY60538.1| peroxisomal hydratase-dehydrogenase-epimerase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 167.548 bits (423), Expect = 3.149e-48
Identity = 83/164 (50.61%), Postives = 116/164 (70.73%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
            M  +T+F +  G +VA  ISGSF+RG+TG++ KG +LP R+ +P R      E  TS  QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ +     GG+ A  +S+  RFS P FPGET+ T +W+E  S +++FQ  VKERGV +++GG
Sbjct:  127 METQTQFEDANG-IVAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQE-SSGKVLFQAVVKERGVVIVDGG 286          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|308445550|gb|ADO32963.1| (MaoC-like dehydratase [Phytophthora capsici])

HSP 1 Score: 165.236 bits (417), Expect = 2.731e-47
Identity = 83/172 (48.26%), Postives = 119/172 (69.19%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNS 172
            M  +T+F +  G  VA  ISGSF+RG+TG++ KG +LP R+ +P R      E  TS  QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ +     GG+ A  +S+  RFS P FPGET+ T +W+E GS +++FQ  VKERG  +++GG  +  +++
Sbjct:  127 METQTQFEDGNGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFNDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALFKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQE-GSGKVLFQAVVKERGAVIVDGGEFVYTQDA 294          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|675207233|ref|XP_008912501.1| (hypothetical protein PPTG_16766 [Phytophthora parasitica INRA-310] >gi|568087244|gb|ETN02118.1| hypothetical protein PPTG_16766 [Phytophthora parasitica INRA-310] >gi|570941340|gb|ETP06597.1| hypothetical protein F441_17030 [Phytophthora parasitica CJ01A1] >gi|570971564|gb|ETP34683.1| hypothetical protein F442_17031 [Phytophthora parasitica P10297] >gi|970644158|gb|KUF85129.1| Eukaryotic translation initiation factor 4E type 2 [Phytophthora nicotianae])

HSP 1 Score: 165.236 bits (417), Expect = 3.075e-47
Identity = 82/172 (47.67%), Postives = 118/172 (68.60%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNS 172
            M  +T+F +  G  VA  ISGSF+RG+TG++ KG +LP R+ +P R      E  TS  QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ +     GG+ A  +S+  RFS P FPGET+ T +W+E  + +++FQ  VKERGV +++GG  +   ++
Sbjct:  127 METQTQFEDANGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQER-NDKVLFQAVVKERGVVIVDGGEFVYATDA 294          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|566013860|gb|ETI36771.1| (hypothetical protein F443_17156 [Phytophthora parasitica P1569] >gi|567951284|gb|ETK76987.1| hypothetical protein L915_16697 [Phytophthora parasitica] >gi|567979945|gb|ETL30416.1| hypothetical protein L916_16605 [Phytophthora parasitica] >gi|568009447|gb|ETL83649.1| hypothetical protein L917_16424 [Phytophthora parasitica] >gi|570317543|gb|ETO65491.1| hypothetical protein F444_17199 [Phytophthora parasitica P1976])

HSP 1 Score: 165.236 bits (417), Expect = 3.352e-47
Identity = 82/164 (50.00%), Postives = 115/164 (70.12%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
            M  +T+F +  G  VA  ISGSF+RG+TG++ KG +LP R+ +P R      E  TS  QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ +     GG+ A  +S+  RFS P FPGET+ T +W+E  + +++FQ  VKERGV +++GG
Sbjct:  127 METQTQFEDANGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQER-NDKVLFQAVVKERGVVIVDGG 286          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|568039354|gb|ETM36850.1| (hypothetical protein L914_16532 [Phytophthora parasitica])

HSP 1 Score: 164.851 bits (416), Expect = 4.028e-47
Identity = 80/164 (48.78%), Postives = 115/164 (70.12%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
            M  +T+F +  G +  + ISGSF+RG+TG++ KG +LP R+ +P R      E  TS  QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ +     GG+ A  +S+  RFS P FPGET+ T +W+E  + +++FQ  VKERGV +++GG
Sbjct:  127 METQTQFEDANGPMAKL-ISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQER-NDKVLFQAVVKERGVVIVDGG 286          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|311772053|pdb|3KH8|A (Chain A, Crystal Structure Of Maoc-Like Dehydratase From Phytophthora Capsici >gi|311772054|pdb|3KH8|B Chain B, Crystal Structure Of Maoc-Like Dehydratase From Phytophthora Capsici)

HSP 1 Score: 165.236 bits (417), Expect = 6.177e-47
Identity = 83/164 (50.61%), Postives = 115/164 (70.12%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
            M  +T+F +  G  VA  ISGSF+RG+TG++ KG +LP R+ +P R      E  TS  QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ +     GG+ A  +S+  RFS P FPGET+ T +W+E GS +++FQ  VKERG  +++GG
Sbjct:  161 METQTQFEDGNGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFNDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALFKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQE-GSGKVLFQAVVKERGAVIVDGG 320          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|695412478|ref|XP_009525748.1| (hypothetical protein PHYSODRAFT_330751 [Phytophthora sojae] >gi|348676873|gb|EGZ16690.1| hypothetical protein PHYSODRAFT_330751 [Phytophthora sojae])

HSP 1 Score: 163.31 bits (412), Expect = 1.947e-46
Identity = 80/172 (46.51%), Postives = 118/172 (68.60%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNS 172
            M  +T+F +  G  VA  +SGSF+RG+TG++ KG +LP R+ +P R      E  TS  QA +YRLSGDYN LH DPE+A++VGF++PILHGLC+ G ++RA+ +     GG+ A  +S+  RFS P FPGET+ T +W+E G+ +++FQ  VKERGV +++GG  +   ++
Sbjct:  127 METQTQFEDANGP-VARLVSGSFIRGLTGYEGKGRKLPARVQIPKRQPDFFDEFKTSPHQAQVYRLSGDYNLLHIDPEVAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDAARFKSIRVRFSSPCFPGETIQTRMWQE-GNGKVLFQAVVKERGVVIVDGGEFVYAHDA 294          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|970636238|gb|KUF80953.1| (enoyl-CoA hydratase 2 [Phytophthora nicotianae])

HSP 1 Score: 165.236 bits (417), Expect = 2.900e-45
Identity = 82/164 (50.00%), Postives = 115/164 (70.12%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
            M  +T+F +  G  VA  ISGSF+RG+TG++ KG +LP R+ +P R      E  TS  QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ +     GG+ A  +S+  RFS P FPGET+ T +W+E  + +++FQ  VKERGV +++GG
Sbjct:  127 METQTQFEDANGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQER-NDKVLFQAVVKERGVVIVDGG 286          
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|953489989|emb|CEG46784.1| (peroxisomal hydratase-dehydrogenase-epimerase [Plasmopara halstedii])

HSP 1 Score: 159.844 bits (403), Expect = 3.360e-45
Identity = 82/164 (50.00%), Postives = 109/164 (66.46%), Query Frame = 0
Query:    1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
            M   T+F +E G LV + ISGSF+RG+TG++ KG +LP  + +P      V E  TS  QA IYRLSGDYN LH DPE+A +VGFE+PILHGLC+ G ++RA+ +     GG  A  +S+  RFS P +PGET+ T +W+  G + I+FQ  VKER V +L GG
Sbjct:  127 METYTQFEDEVGPLVKL-ISGSFIRGLTGYKGKGRKLPPHVQIPKCQPDYVDEFKTSLHQAQIYRLSGDYNPLHVDPEVAMSVGFEKPILHGLCSMGIASRALFKQ--FCGGQVARFKSIRVRFSSPCYPGETIQTRMWQATGGR-ILFQAVVKERDVVILNGG 286          
The following BLAST results are available for this feature:
BLAST of EWM27749.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110022|gb|EWM27749.1|3.392e-129100.00hypothetical protein Naga_100034g21 [Nannochlorops... [more]
gi|301101646|ref|XP_002899911.1|3.149e-4850.61peroxisomal hydratase-dehydrogenase-epimerase, put... [more]
gi|308445550|gb|ADO32963.1|2.731e-4748.26MaoC-like dehydratase [Phytophthora capsici][more]
gi|675207233|ref|XP_008912501.1|3.075e-4747.67hypothetical protein PPTG_16766 [Phytophthora para... [more]
gi|566013860|gb|ETI36771.1|3.352e-4750.00hypothetical protein F443_17156 [Phytophthora para... [more]
gi|568039354|gb|ETM36850.1|4.028e-4748.78hypothetical protein L914_16532 [Phytophthora para... [more]
gi|311772053|pdb|3KH8|A6.177e-4750.61Chain A, Crystal Structure Of Maoc-Like Dehydratas... [more]
gi|695412478|ref|XP_009525748.1|1.947e-4646.51hypothetical protein PHYSODRAFT_330751 [Phytophtho... [more]
gi|970636238|gb|KUF80953.1|2.900e-4550.00enoyl-CoA hydratase 2 [Phytophthora nicotianae][more]
gi|953489989|emb|CEG46784.1|3.360e-4550.00peroxisomal hydratase-dehydrogenase-epimerase [Pla... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2959rna2959Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications