EWM27749.1, cds2951 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|585110022|gb|EWM27749.1| (hypothetical protein Naga_100034g21 [Nannochloropsis gaditana]) HSP 1 Score: 369.007 bits (946), Expect = 3.392e-129 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNSPVVQEALQSKL 183
MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNSPVVQEALQSKL
Sbjct: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNSPVVQEALQSKL 183
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|301101646|ref|XP_002899911.1| (peroxisomal hydratase-dehydrogenase-epimerase, putative [Phytophthora infestans T30-4] >gi|262102486|gb|EEY60538.1| peroxisomal hydratase-dehydrogenase-epimerase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 167.548 bits (423), Expect = 3.149e-48 Identity = 83/164 (50.61%), Postives = 116/164 (70.73%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
M +T+F + G +VA ISGSF+RG+TG++ KG +LP R+ +P R E TS QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ + GG+ A +S+ RFS P FPGET+ T +W+E S +++FQ VKERGV +++GG
Sbjct: 127 METQTQFEDANG-IVAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQE-SSGKVLFQAVVKERGVVIVDGG 286
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|308445550|gb|ADO32963.1| (MaoC-like dehydratase [Phytophthora capsici]) HSP 1 Score: 165.236 bits (417), Expect = 2.731e-47 Identity = 83/172 (48.26%), Postives = 119/172 (69.19%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNS 172
M +T+F + G VA ISGSF+RG+TG++ KG +LP R+ +P R E TS QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ + GG+ A +S+ RFS P FPGET+ T +W+E GS +++FQ VKERG +++GG + +++
Sbjct: 127 METQTQFEDGNGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFNDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALFKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQE-GSGKVLFQAVVKERGAVIVDGGEFVYTQDA 294
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|675207233|ref|XP_008912501.1| (hypothetical protein PPTG_16766 [Phytophthora parasitica INRA-310] >gi|568087244|gb|ETN02118.1| hypothetical protein PPTG_16766 [Phytophthora parasitica INRA-310] >gi|570941340|gb|ETP06597.1| hypothetical protein F441_17030 [Phytophthora parasitica CJ01A1] >gi|570971564|gb|ETP34683.1| hypothetical protein F442_17031 [Phytophthora parasitica P10297] >gi|970644158|gb|KUF85129.1| Eukaryotic translation initiation factor 4E type 2 [Phytophthora nicotianae]) HSP 1 Score: 165.236 bits (417), Expect = 3.075e-47 Identity = 82/172 (47.67%), Postives = 118/172 (68.60%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNS 172
M +T+F + G VA ISGSF+RG+TG++ KG +LP R+ +P R E TS QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ + GG+ A +S+ RFS P FPGET+ T +W+E + +++FQ VKERGV +++GG + ++
Sbjct: 127 METQTQFEDANGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQER-NDKVLFQAVVKERGVVIVDGGEFVYATDA 294
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|566013860|gb|ETI36771.1| (hypothetical protein F443_17156 [Phytophthora parasitica P1569] >gi|567951284|gb|ETK76987.1| hypothetical protein L915_16697 [Phytophthora parasitica] >gi|567979945|gb|ETL30416.1| hypothetical protein L916_16605 [Phytophthora parasitica] >gi|568009447|gb|ETL83649.1| hypothetical protein L917_16424 [Phytophthora parasitica] >gi|570317543|gb|ETO65491.1| hypothetical protein F444_17199 [Phytophthora parasitica P1976]) HSP 1 Score: 165.236 bits (417), Expect = 3.352e-47 Identity = 82/164 (50.00%), Postives = 115/164 (70.12%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
M +T+F + G VA ISGSF+RG+TG++ KG +LP R+ +P R E TS QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ + GG+ A +S+ RFS P FPGET+ T +W+E + +++FQ VKERGV +++GG
Sbjct: 127 METQTQFEDANGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQER-NDKVLFQAVVKERGVVIVDGG 286
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|568039354|gb|ETM36850.1| (hypothetical protein L914_16532 [Phytophthora parasitica]) HSP 1 Score: 164.851 bits (416), Expect = 4.028e-47 Identity = 80/164 (48.78%), Postives = 115/164 (70.12%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
M +T+F + G + + ISGSF+RG+TG++ KG +LP R+ +P R E TS QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ + GG+ A +S+ RFS P FPGET+ T +W+E + +++FQ VKERGV +++GG
Sbjct: 127 METQTQFEDANGPMAKL-ISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQER-NDKVLFQAVVKERGVVIVDGG 286
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|311772053|pdb|3KH8|A (Chain A, Crystal Structure Of Maoc-Like Dehydratase From Phytophthora Capsici >gi|311772054|pdb|3KH8|B Chain B, Crystal Structure Of Maoc-Like Dehydratase From Phytophthora Capsici) HSP 1 Score: 165.236 bits (417), Expect = 6.177e-47 Identity = 83/164 (50.61%), Postives = 115/164 (70.12%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
M +T+F + G VA ISGSF+RG+TG++ KG +LP R+ +P R E TS QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ + GG+ A +S+ RFS P FPGET+ T +W+E GS +++FQ VKERG +++GG
Sbjct: 161 METQTQFEDGNGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFNDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALFKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQE-GSGKVLFQAVVKERGAVIVDGG 320
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|695412478|ref|XP_009525748.1| (hypothetical protein PHYSODRAFT_330751 [Phytophthora sojae] >gi|348676873|gb|EGZ16690.1| hypothetical protein PHYSODRAFT_330751 [Phytophthora sojae]) HSP 1 Score: 163.31 bits (412), Expect = 1.947e-46 Identity = 80/172 (46.51%), Postives = 118/172 (68.60%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGGLAIIGKNS 172
M +T+F + G VA +SGSF+RG+TG++ KG +LP R+ +P R E TS QA +YRLSGDYN LH DPE+A++VGF++PILHGLC+ G ++RA+ + GG+ A +S+ RFS P FPGET+ T +W+E G+ +++FQ VKERGV +++GG + ++
Sbjct: 127 METQTQFEDANGP-VARLVSGSFIRGLTGYEGKGRKLPARVQIPKRQPDFFDEFKTSPHQAQVYRLSGDYNLLHIDPEVAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDAARFKSIRVRFSSPCFPGETIQTRMWQE-GNGKVLFQAVVKERGVVIVDGGEFVYAHDA 294
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|970636238|gb|KUF80953.1| (enoyl-CoA hydratase 2 [Phytophthora nicotianae]) HSP 1 Score: 165.236 bits (417), Expect = 2.900e-45 Identity = 82/164 (50.00%), Postives = 115/164 (70.12%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
M +T+F + G VA ISGSF+RG+TG++ KG +LP R+ +P R E TS QA +YRLSGDYNSLH DPEIA++VGF++PILHGLC+ G ++RA+ + GG+ A +S+ RFS P FPGET+ T +W+E + +++FQ VKERGV +++GG
Sbjct: 127 METQTQFEDANGP-VAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFYDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSVGFKQPILHGLCSMGVASRALYKQ--FCGGDVARFKSIRVRFSSPCFPGETIQTRMWQER-NDKVLFQAVVKERGVVIVDGG 286
BLAST of EWM27749.1 vs. NCBI_GenBank
Match: gi|953489989|emb|CEG46784.1| (peroxisomal hydratase-dehydrogenase-epimerase [Plasmopara halstedii]) HSP 1 Score: 159.844 bits (403), Expect = 3.360e-45 Identity = 82/164 (50.00%), Postives = 109/164 (66.46%), Query Frame = 0
Query: 1 MREETRFVNEEGRLVAVSISGSFLRGVTGFQSKGPQLPQRISVPARPAAAVIEEPTSQEQALIYRLSGDYNSLHADPEIAQTVGFERPILHGLCTFGHSARAVLRSGLVPGGNPAMLRSLTARFSKPAFPGETLVTSLWKEDGSQEIVFQTRVKERGVTVLEGG 164
M T+F +E G LV + ISGSF+RG+TG++ KG +LP + +P V E TS QA IYRLSGDYN LH DPE+A +VGFE+PILHGLC+ G ++RA+ + GG A +S+ RFS P +PGET+ T +W+ G + I+FQ VKER V +L GG
Sbjct: 127 METYTQFEDEVGPLVKL-ISGSFIRGLTGYKGKGRKLPPHVQIPKCQPDYVDEFKTSLHQAQIYRLSGDYNPLHVDPEVAMSVGFEKPILHGLCSMGIASRALFKQ--FCGGQVARFKSIRVRFSSPCYPGETIQTRMWQATGGR-ILFQAVVKERDVVILNGG 286 The following BLAST results are available for this feature:
BLAST of EWM27749.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|