EWM30369.1, cds295 (CDS) Nannochloropsis gaditana

Overview
NameEWM30369.1
Unique Namecds295
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:732327..734645 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30369.1
Producttho complex subunit 5
Orig transcript idgnl|cribi|Naga_100026g21.10623.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:732327..734645 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR019163THO_Thoc5
Homology
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|585113029|gb|EWM30369.1| (tho complex subunit 5 [Nannochloropsis gaditana])

HSP 1 Score: 1553.11 bits (4020), Expect = 0.000e+0
Identity = 772/772 (100.00%), Postives = 772/772 (100.00%), Query Frame = 0
Query:    1 MSVSFQSHSIKQDTVPALRRHLTVIRLEAWGSACSSGSAATRGMTGKTTLRAVHEDLVELVHRLKGTLGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAPLPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEGGSLILVDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGGTSPFPPEFVDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKRPGDVPRDASSPRLFPGVEDAGVGRWLVSSFTEVTRSALSGEEPGEGREEGGGKGEDQGDTDPFAEAPCGVLGGEEGEEAGGPDEVQTRNADREGPATVRSTEGGVAWERAGARYFDLALRAQADTKKGGGGRKEKAPEGPELHVAVEITPEYPIRPPRFRLLSPSSLAASTLAAHAPFREAFAHILVEVNVHYEELLMGGSVRDWLFPHQVHKLLFCLEASGAVGGSGSSGGGSERLRWGKDRRRGYSFDTHCALLMPR 772
            MSVSFQSHSIKQDTVPALRRHLTVIRLEAWGSACSSGSAATRGMTGKTTLRAVHEDLVELVHRLKGTLGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAPLPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEGGSLILVDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGGTSPFPPEFVDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKRPGDVPRDASSPRLFPGVEDAGVGRWLVSSFTEVTRSALSGEEPGEGREEGGGKGEDQGDTDPFAEAPCGVLGGEEGEEAGGPDEVQTRNADREGPATVRSTEGGVAWERAGARYFDLALRAQADTKKGGGGRKEKAPEGPELHVAVEITPEYPIRPPRFRLLSPSSLAASTLAAHAPFREAFAHILVEVNVHYEELLMGGSVRDWLFPHQVHKLLFCLEASGAVGGSGSSGGGSERLRWGKDRRRGYSFDTHCALLMPR
Sbjct:    1 MSVSFQSHSIKQDTVPALRRHLTVIRLEAWGSACSSGSAATRGMTGKTTLRAVHEDLVELVHRLKGTLGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAPLPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEGGSLILVDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGGTSPFPPEFVDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKRPGDVPRDASSPRLFPGVEDAGVGRWLVSSFTEVTRSALSGEEPGEGREEGGGKGEDQGDTDPFAEAPCGVLGGEEGEEAGGPDEVQTRNADREGPATVRSTEGGVAWERAGARYFDLALRAQADTKKGGGGRKEKAPEGPELHVAVEITPEYPIRPPRFRLLSPSSLAASTLAAHAPFREAFAHILVEVNVHYEELLMGGSVRDWLFPHQVHKLLFCLEASGAVGGSGSSGGGSERLRWGKDRRRGYSFDTHCALLMPR 772          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|553192389|ref|XP_005855563.1| (THO complex subunit 5, partial [Nannochloropsis gaditana CCMP526] >gi|422293497|gb|EKU20797.1| THO complex subunit 5, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query:   12 QDTVPALRRHLTVIRLEAWGSACSSGSAATRGMTGKTTLRAVHEDLVELVHRLKGTLGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAPLPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEGGS 347
            QDTVPALRRHLTVIRLEAWGSACSSGSAATRGMTGKTTLRAVHEDLVELVHRLKGTLGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAPLPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEGGS
Sbjct:    1 QDTVPALRRHLTVIRLEAWGSACSSGSAATRGMTGKTTLRAVHEDLVELVHRLKGTLGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAPLPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEGGS 336          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|669171383|ref|XP_008621040.1| (hypothetical protein SDRG_16602 [Saprolegnia diclina VS20] >gi|530727277|gb|EQC25519.1| hypothetical protein SDRG_16602 [Saprolegnia diclina VS20])

HSP 1 Score: 84.3445 bits (207), Expect = 3.426e-13
Identity = 71/213 (33.33%), Postives = 98/213 (46.01%), Query Frame = 0
Query:   85 ITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPV----EEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQ-VQALPRPMYVLLGRLQAYRQAQDPAARRTRV 292
            +  A + L + KS  R++ +     R  +  +K  V+  HL+LQNLMYEKDHL R I+  R FPM E+ KIE  EG               LPV    + H   L RL+ EK AR ++ E+      K A L   V E RA L  SLP +I  ++     +      LSI         +   + LP  +Y L   L+AY QA    + R R+
Sbjct:   39 VARALLLLQKIKSSTRDTFLETEAWRKRVADQKDLVEAHHLKLQNLMYEKDHLLREIKRCRGFPMKEMDKIEFPEGQ--------------LPVTGDPDMHAEHLLRLETEKEAREEVQEQQRQLHAKVATLDEAVVEKRAFLE-SLPAEIAAIEKASEPLQA---LLSIPVTTMDVTRQHDAKELPSALYTLYCELEAYTQAMGAGSMRLRI 233          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|299470792|emb|CBN79838.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 84.3445 bits (207), Expect = 3.801e-13
Identity = 67/221 (30.32%), Postives = 102/221 (46.15%), Query Frame = 0
Query:   66 GTLGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPP-------EQVQALPRPMYVLLGRLQAY 279
            G L D    V GK      + +A +   E  S  R+   A+   R ++ + K+ +D  HLQL+NL+YE+D+L R  Q  RDF M EL K+EEDE    L  +       L   EEH  +L  L+++K  RI       A Q +  A S  V E R  L   LP  +++++     + + +P          + P       E+   LP P++ L  +L+AY
Sbjct:   47 GLLHDDGPSVHGK------MRKAQLLFTELHSTTRKIHSAIETIRNKVATAKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEDEEQGFLEDVDT-----LQTAEEHAGNLAILKDQKEQRINAQLALKATQIRVKAASSTVKESRDYLD-RLPENLKDVERALAPLKKNMP----------WRPGSRRGRHERSSELPGPLFTLYCQLEAY 245          

HSP 2 Score: 71.2478 bits (173), Expect = 4.530e-9
Identity = 114/410 (27.80%), Postives = 147/410 (35.85%), Query Frame = 0
Query:  367 GGLQENAGDWDVLIFFFAPEGRELLVTAPGRHP--QALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSP--RSFLWLQWLGGTSPFPPEF--------VDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKRPGDVPRDASSPRLFPGVEDAGVGRWLVSSFTEVTRSALSGEEPGEGREEGGGKGEDQGDTDPFAEAPCGVLGGEEGEEAGGPDEVQTRNADREGPATVRSTEGGVAWERAGARYFDLALRAQADTKKGGGGRKEKAPEGPELHVAVEITPEYPIRPPRFRLLSPSSLAASTLAAHAPFREAFAHILVEVNVHYEELLMGGSVR-DWLFPHQVHKLLFCLEASGAVGGSGSSGGGSERLRWGKDRRRGYSFD 763
             G    A  + V   FF   G  ++   P  H     L NL P DTG D +  P +H  +   A                  +    F  P     R + W Q L G   FPP            + +  T+   +  LR R R+  +L G L++L         D   P   PG  D  V        TE       G E    +E  G   E Q  +  F E      GG E  EA                A  RS E    WER GARYF   L      K G G  KE+      +HV VE+  EYP+RP     L+  S   +  A  A  R+    +  EVN HY+ LL     R D L  HQ+  ++ CL          S  G   RLR G+ RR+   F+
Sbjct:  406 SGSTSTAETFKVRFSFFPSLG--VVAVRPAAHDGGALLANLFPADTGKD-TPNPANHHNKAAQA------------------SPLGVFEYPADVPCRPYRWAQRLAGLR-FPPAADGGGAVAATTMPIEPTTRSAVAALRSRARTLAALGGQLKALS--------DGKGPSPLPGSRDEVV--------TE-------GVELRSWKELSGS--EQQQASTTFQENHASKSGGSEEAEA----------------ACCRSLE---LWERFGARYFKGTL----SIKHGRG--KERI-----VHVQVEVPAEYPLRPSLIS-LTEDSKPDADAAGDAALRDELCTVANEVNAHYDTLLTEDVDRWDHLLSHQLLLVMECL---------ASKAGTLGRLRKGRMRRKPVVFE 728          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|813126299|ref|XP_012196983.1| (hypothetical protein SPRG_03012 [Saprolegnia parasitica CBS 223.65] >gi|641538706|gb|KDO32537.1| hypothetical protein SPRG_03012 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 83.5741 bits (205), Expect = 5.363e-13
Identity = 69/213 (32.39%), Postives = 99/213 (46.48%), Query Frame = 0
Query:   85 ITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPV----EEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQ-VQALPRPMYVLLGRLQAYRQAQDPAARRTRV 292
            +  A + L + KS  R++ +     R  +  +K  V+  HL+LQNLMYEKDHL R I+  R FPM E+ KIE  EG               LPV    + H   L RL+ EK AR ++ E+      K AA+   + E R  L  SLP +I  ++     +      LSI         +   + LP  +Y L   L+AY QA  P + + R+
Sbjct:   39 VARALLLLQKIKSSTRDTFLETEAWRKRVADQKDLVEAHHLKLQNLMYEKDHLLREIKRCRGFPMKEMDKIEFPEGQ--------------LPVTGDPDMHAEHLLRLETEKEAREEVQEQQRQLHAKIAAVDEAIVEKRTFLE-SLPAEIAAIEKASEPLQAL---LSIPVTTMDVARQHDAKELPSALYTLYCELEAYMQAMGPGSLQLRI 233          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|1173950166|gb|OQR98143.1| (hypothetical protein ACHHYP_09048 [Achlya hypogyna])

HSP 1 Score: 81.2629 bits (199), Expect = 2.692e-12
Identity = 121/423 (28.61%), Postives = 168/423 (39.72%), Query Frame = 0
Query:   77 GKD-EMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEE----HRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHE--RIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAPLPQC-------------VAALGTE------AARLKAKRAQLGPSAS-SPSTSGEGEGAEEEGGSLIL---VDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGG 469
             KD E+   +  A + L + K   R++ +     R  +  +K  V+  HL+LQNL+YEKDHL R I+  R F M E+ KI   EG               LPV E    H   L RL+ EK AR ++  +      K AA+     E RA L  SLP +I  ++     + +   IP  S+         ++ ++LP P+Y L   L AY  A   AA   RV   P       LP+              V+A  TE           AKR +   + S SPS S   + A     + +      Q+A R     L P  G  E A     +IF+F P    + V  P   PQ L  L   DTG D +    +  A  T  G         V+ D         F +    R +LW QW+ G
Sbjct:   33 AKDSEVSPQVARALLLLQKIKGSTRDTFLEAESWRKRVAEQKDLVESHHLKLQNLLYEKDHLLREIKRCRGFAMKEMEKIAFPEGQ--------------LPVSEDPDMHAEHLLRLETEKEAREEVQAQQRELHAKIAAVEEATVEKRAFL-ESLPAEIAAIEKASQPLQKLLAIPVTSM----DHARQQEAKSLPSPLYTLYTELDAYMHALGGAAIELRVTEAPTT-----LPRQLKVSSRPPRGAGPVSAAKTENRTRHDGDERAAKRQKTAVAVSRSPSPSIAEQPAAVPLATAVQSAEAFQMAPRALELKLLPPAGSTEKAAR---VIFYFLPVLNVVTVETPD-FPQLLALLFAKDTG-DVTPNLAAGYALETEEGLE-------VEMD---------FPADTCARPYLWAQWVCG 410          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|698816346|ref|XP_009841202.1| (hypothetical protein H257_14955 [Aphanomyces astaci] >gi|574103807|gb|ETV69345.1| hypothetical protein H257_14955 [Aphanomyces astaci])

HSP 1 Score: 80.4925 bits (197), Expect = 4.433e-12
Identity = 106/447 (23.71%), Postives = 175/447 (39.15%), Query Frame = 0
Query:   70 DQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQL--HEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQA-PLPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEGGSLILVDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGGTSPFPPEFVDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKR 513
            D N     KD     + +A   L + K   RE+ +     R  +  +K  V+  HL+LQNL+YEKD+L R I+  R FP  EL KIE  +G  +LP L +         + H+  L+RL +E   R  L  H++H+  Q        +  + +  L  +LP  +  ++     +      LS+         +  +ALP P+Y+L   L AY      +            D +A PL +          +LK+ R + GP A++P  +        +       D  A       +    GL +       ++F + P    ++V +P R P  L  L   D+G      P    A  T  G+                     F +    R ++W QW+ G +      V   L  +   ++ RLR R  +Q +L   L++L+ +
Sbjct:   30 DDNGTTTSKD-----VVKALCLLKDVKQSTRETFLDAEVYRRRVAEQKDLVEAHHLKLQNLLYEKDNLLREIKRCRGFPTKELDKIEFKDG--VLPVLVDD--------DRHKRHLQRLDDELSDRKALLQHQQHLKTQISSV---EDATQSKHALLDALPAHLAAIEEASRPLQAL---LSVPISDSRDRHQAAKALPTPLYLLFCELDAYLSIHAGSG------AVGIADSKAGPLSKL---------KLKSTRGKEGPDAATPDDADSATPPPPKRPKTSTTDHDAFIPSPQSVVLQLGLPDKPTSTTKVVFQYLPRLGVVVVDSP-RFPTLLRRLFATDSGL--QTPPGVSYAFKTADGAE----------------VPMEFPADVKARPYVWAQWISGLTS-----VGHRLEPSVRHVMARLRQRYAAQHALYVHLDALKDK 416          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|698816348|ref|XP_009841203.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574103808|gb|ETV69346.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 80.1073 bits (196), Expect = 5.812e-12
Identity = 106/447 (23.71%), Postives = 175/447 (39.15%), Query Frame = 0
Query:   70 DQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQL--HEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQA-PLPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEGGSLILVDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGGTSPFPPEFVDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKR 513
            D N     KD     + +A   L + K   RE+ +     R  +  +K  V+  HL+LQNL+YEKD+L R I+  R FP  EL KIE  +G  +LP L +         + H+  L+RL +E   R  L  H++H+  Q        +  + +  L  +LP  +  ++     +      LS+         +  +ALP P+Y+L   L AY      +            D +A PL +          +LK+ R + GP A++P  +        +       D  A       +    GL +       ++F + P    ++V +P R P  L  L   D+G      P    A  T  G+                     F +    R ++W QW+ G +      V   L  +   ++ RLR R  +Q +L   L++L+ +
Sbjct:   30 DDNGTTTSKD-----VVKALCLLKDVKQSTRETFLDAEVYRRRVAEQKDLVEAHHLKLQNLLYEKDNLLREIKRCRGFPTKELDKIEFKDG--VLPVLVDD--------DRHKRHLQRLDDELSDRKALLQHQQHLKTQISSV---EDATQSKHALLDALPAHLAAIEEASRPLQAL---LSVPISDSRDRHQAAKALPTPLYLLFCELDAYLSIHAGSG------AVGIADSKAGPLSKL---------KLKSTRGKEGPDAATPDDADSATPPPPKRPKTSTTDHDAFIPSPQSVVLQLGLPDKPTSTTKVVFQYLPRLGVVVVDSP-RFPTLLRRLFATDSGL--QTPPGVSYAFKTADGAE----------------VPMEFPADVKARPYVWAQWISGLTS-----VGHRLEPSVRHVMARLRQRYAAQHALYVHLDALKDK 416          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|673041299|ref|XP_008874610.1| (hypothetical protein H310_10123 [Aphanomyces invadans] >gi|574469819|gb|ETV96832.1| hypothetical protein H310_10123 [Aphanomyces invadans])

HSP 1 Score: 80.1073 bits (196), Expect = 7.043e-12
Identity = 116/450 (25.78%), Postives = 183/450 (40.67%), Query Frame = 0
Query:   85 ITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEE---KGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQA----------QDPAARRTRVEVFPCGDEQAPLPQCVAALGTEAARLKAKRAQL-GPSASSPSTSGEGEGAEEEGGSLILVDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGGTSP---FPPEFVDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKRPGDV 517
            +  A   L + K   RE+ +   G R  +  +K  V+  HL+LQNL+YEKDHL R I+  + +P  EL +I+  +G   LP L +         + H   L+RL +E   + A++Q H++ + AQ   AA+   V    A+L T +P  I  ++     +      LSI            + LP P+Y L   L A+             +      +++ +       A  P+ + A  T AA   AKRA+L  P  ++P              SL+L   L       P         ++    VL F + P+ R ++V AP R+P  L NL   D+G D    P    A     G   +    A  TD  +             R ++W QW+ G S      P             ++ RLR R   Q +L G L++L+++  D+
Sbjct:   40 VVRALCLLKDIKQSTRETFLDAEGYRRRVAEQKDLVEAHHLKLQNLLYEKDHLLREIRRCKGYPTKELDQIQFKDGP--LPVLVDA--------DSHDKHLKRLDDELADRKAQLQ-HQQDLKAQI--AAVDEAVQAKHALLDT-VPAHIAAIEEATRPLQAL---LSIPISESTQRHRDAKVLPAPLYSLFCELDAFLSIHPGTGTVAIGEAKVGSLSKLRIKSRKSTSAAAPEKIEADDT-AAPPDAKRAKLTDPHDAAPFVPA--------PQSLVLELYL-------PTAAGAASASDSHKTKVL-FMYLPQLRVVVVEAP-RYPALLRNLFAADSGTDFPNQPAIAYAFEASDG---MEVPMAFPTDVKA-------------RPYVWAQWITGLSSTGRIEPSI---------RHVMARLRHRYTIQHALYGHLDALKEKRVDL 429          
BLAST of EWM30369.1 vs. NCBI_GenBank
Match: gi|673041297|ref|XP_008874609.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574469820|gb|ETV96833.1| hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 79.7221 bits (195), Expect = 7.325e-12
Identity = 116/450 (25.78%), Postives = 183/450 (40.67%), Query Frame = 0
Query:   85 ITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEE---KGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQA----------QDPAARRTRVEVFPCGDEQAPLPQCVAALGTEAARLKAKRAQL-GPSASSPSTSGEGEGAEEEGGSLILVDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGADPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGGTSP---FPPEFVDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKRPGDV 517
            +  A   L + K   RE+ +   G R  +  +K  V+  HL+LQNL+YEKDHL R I+  + +P  EL +I+  +G   LP L +         + H   L+RL +E   + A++Q H++ + AQ   AA+   V    A+L T +P  I  ++     +      LSI            + LP P+Y L   L A+             +      +++ +       A  P+ + A  T AA   AKRA+L  P  ++P              SL+L   L       P         ++    VL F + P+ R ++V AP R+P  L NL   D+G D    P    A     G   +    A  TD  +             R ++W QW+ G S      P             ++ RLR R   Q +L G L++L+++  D+
Sbjct:   40 VVRALCLLKDIKQSTRETFLDAEGYRRRVAEQKDLVEAHHLKLQNLLYEKDHLLREIRRCKGYPTKELDQIQFKDGP--LPVLVDA--------DSHDKHLKRLDDELADRKAQLQ-HQQDLKAQI--AAVDEAVQAKHALLDT-VPAHIAAIEEATRPLQAL---LSIPISESTQRHRDAKVLPAPLYSLFCELDAFLSIHPGTGTVAIGEAKVGSLSKLRIKSRKSTSAAAPEKIEADDT-AAPPDAKRAKLTDPHDAAPFVPA--------PQSLVLELYL-------PTAAGAASASDSHKTKVL-FMYLPQLRVVVVEAP-RYPALLRNLFAADSGTDFPNQPAIAYAFEASDG---MEVPMAFPTDVKA-------------RPYVWAQWITGLSSTGRIEPSI---------RHVMARLRHRYTIQHALYGHLDALKEKRVDL 429          
The following BLAST results are available for this feature:
BLAST of EWM30369.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113029|gb|EWM30369.1|0.000e+0100.00tho complex subunit 5 [Nannochloropsis gaditana][more]
gi|553192389|ref|XP_005855563.1|0.000e+0100.00THO complex subunit 5, partial [Nannochloropsis ga... [more]
gi|669171383|ref|XP_008621040.1|3.426e-1333.33hypothetical protein SDRG_16602 [Saprolegnia dicli... [more]
gi|299470792|emb|CBN79838.1|3.801e-1330.32conserved unknown protein [Ectocarpus siliculosus][more]
gi|813126299|ref|XP_012196983.1|5.363e-1332.39hypothetical protein SPRG_03012 [Saprolegnia paras... [more]
gi|1173950166|gb|OQR98143.1|2.692e-1228.61hypothetical protein ACHHYP_09048 [Achlya hypogyna... [more]
gi|698816346|ref|XP_009841202.1|4.433e-1223.71hypothetical protein H257_14955 [Aphanomyces astac... [more]
gi|698816348|ref|XP_009841203.1|5.812e-1223.71hypothetical protein, variant 1 [Aphanomyces astac... [more]
gi|673041299|ref|XP_008874610.1|7.043e-1225.78hypothetical protein H310_10123 [Aphanomyces invad... [more]
gi|673041297|ref|XP_008874609.1|7.325e-1225.78hypothetical protein, variant 1 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna295rna295Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications