EWM27717.1, cds2949 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27717.1 vs. NCBI_GenBank
Match: gi|585109990|gb|EWM27717.1| (hypothetical protein Naga_100034g23 [Nannochloropsis gaditana]) HSP 1 Score: 785.023 bits (2026), Expect = 0.000e+0 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0 Query: 1 MEDLGATIQGIGITGTFLFAVMLAIISWRICVFYFLQDTQHAPLPTSTTFTAKLCFHIFLFMAALLDLCYYIPLSRELVSAGFYSAHLMAQWAELAAFSMIVILWARLLNAPRGKDSVVTYVVALDAFTLIYTLIVICLAIVVQQNGDQWVTSSNQPFVFFFFVQAVALFACCLALLYHGISLQYLVRNHPRWDPIRRERRLRTVLRINITLMACTVCFLLRVVLLLARFIQAESHQQARFSDPATLINWYIWCNWVPDCLPACFLLYTVGNGGGQARRNIDGGVPTSKNGSKMAMTSNTRAGALNSYLRDWEEPLISPFETYKSVVNQKIWHSNAMDHYIPPHPAEPATEINERVSPAAEVVPLIEAAARGALRAEAST 380 MEDLGATIQGIGITGTFLFAVMLAIISWRICVFYFLQDTQHAPLPTSTTFTAKLCFHIFLFMAALLDLCYYIPLSRELVSAGFYSAHLMAQWAELAAFSMIVILWARLLNAPRGKDSVVTYVVALDAFTLIYTLIVICLAIVVQQNGDQWVTSSNQPFVFFFFVQAVALFACCLALLYHGISLQYLVRNHPRWDPIRRERRLRTVLRINITLMACTVCFLLRVVLLLARFIQAESHQQARFSDPATLINWYIWCNWVPDCLPACFLLYTVGNGGGQARRNIDGGVPTSKNGSKMAMTSNTRAGALNSYLRDWEEPLISPFETYKSVVNQKIWHSNAMDHYIPPHPAEPATEINERVSPAAEVVPLIEAAARGALRAEAST Sbjct: 1 MEDLGATIQGIGITGTFLFAVMLAIISWRICVFYFLQDTQHAPLPTSTTFTAKLCFHIFLFMAALLDLCYYIPLSRELVSAGFYSAHLMAQWAELAAFSMIVILWARLLNAPRGKDSVVTYVVALDAFTLIYTLIVICLAIVVQQNGDQWVTSSNQPFVFFFFVQAVALFACCLALLYHGISLQYLVRNHPRWDPIRRERRLRTVLRINITLMACTVCFLLRVVLLLARFIQAESHQQARFSDPATLINWYIWCNWVPDCLPACFLLYTVGNGGGQARRNIDGGVPTSKNGSKMAMTSNTRAGALNSYLRDWEEPLISPFETYKSVVNQKIWHSNAMDHYIPPHPAEPATEINERVSPAAEVVPLIEAAARGALRAEAST 380
BLAST of EWM27717.1 vs. NCBI_GenBank
Match: gi|299116094|emb|CBN74510.1| (hypothetical protein Esi_0028_0136 [Ectocarpus siliculosus]) HSP 1 Score: 98.2117 bits (243), Expect = 4.456e-19 Identity = 79/291 (27.15%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 13 ITGTFLFAVMLAIISWRICVFYFLQDTQHAPLPTSTTFTAKLCFHIFLFMAALLDLCYY-IPLS-RELVSAGFYSAHLMAQWAELAAFSMIVILWARLLNAP------------------RGKDS---------------VVTYVVALDAFTLIYTLIVICLAIVVQQNGDQWVTSSNQPFVFFFFVQAVALFACCLALLYHGISLQYLVRNHPRWDPIRRERRLRTVLRINITLMACTVCFLLRVVLLLARFIQAESHQQARFSDPATLINWYIWCNWVPDCLPACFLLY 268 + G L+ + ++ R FL D + S+T KL FH+ + +ALL++ +Y I L+ R V +G Y+ HL+ W L +FS++++LW+ L+ P G D +V A+DA + T++V+ V + ++P++ +V LF L+ +GI LQ V HPRW+P+ R +RL+ + RIN L+ C CFL+RV +L + H R D L+ + + WV +P LL+ Sbjct: 9 VCGIVLYTLFFGLVCIR--TRPFLTDRRS----LSSTDRIKLAFHVCINTSALLEIVHYAIELAFRGSVLSG-YACHLVGLWLSLVSFSLVIVLWSNTLHPPAAARQQQRNAQGGTAANGGGSDDEPAGWRCCGKTRISIAAKFVCAIDAIVALATVVVLWTGSV---------PAYSRPYLILMVTHSVTLFLLASWLVLYGIRLQRRVMGHPRWEPLDRRQRLKILCRINGVLVVCAACFLVRVAVLSSALFVRSRH---RAEDMNRLL-FEVLARWVSGLIPGVALLH 279 The following BLAST results are available for this feature:
BLAST of EWM27717.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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