EWM27741.1, cds2948 (CDS) Nannochloropsis gaditana

Overview
NameEWM27741.1
Unique Namecds2948
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:350923..351684 -
Alignment locationCM002460.1:349764..350789 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27741.1
Productpheophorbide a oxygenase
Orig transcript idgnl|cribi|Naga_100034g24.6314.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:350923..351684 -
CM002460.1supercontigCM002460.1:349764..350789 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0010277chlorophyllide a oxygenase [overall] activity
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013626PaO
IPR017941Rieske_2Fe-2S
Homology
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|585110014|gb|EWM27741.1| (pheophorbide a oxygenase [Nannochloropsis gaditana])

HSP 1 Score: 1231.85 bits (3186), Expect = 0.000e+0
Identity = 595/595 (100.00%), Postives = 595/595 (100.00%), Query Frame = 0
Query:    1 MPTNRLRRRVSGLSHLPFRVFVLYACLPSISRAFVGGTMSKFPTFLQTYCHKFTKISLNMPAAARILSPASVIEAKENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMKDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYFLPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCYFMPTAADGSVRALRKWLARFGGPRWLVPDLSSLPPTPDRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGRN 595
            MPTNRLRRRVSGLSHLPFRVFVLYACLPSISRAFVGGTMSKFPTFLQTYCHKFTKISLNMPAAARILSPASVIEAKENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMKDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYFLPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCYFMPTAADGSVRALRKWLARFGGPRWLVPDLSSLPPTPDRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGRN
Sbjct:    1 MPTNRLRRRVSGLSHLPFRVFVLYACLPSISRAFVGGTMSKFPTFLQTYCHKFTKISLNMPAAARILSPASVIEAKENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMKDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYFLPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCYFMPTAADGSVRALRKWLARFGGPRWLVPDLSSLPPTPDRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGRN 595          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|585108185|gb|EWM26188.1| (Pheophorbide a oxygenase [Nannochloropsis gaditana])

HSP 1 Score: 329.717 bits (844), Expect = 2.862e-102
Identity = 203/534 (38.01%), Postives = 281/534 (52.62%), Query Frame = 0
Query:   87 FDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMKDV-DEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLP---KRERLIR-----------IVTYAVPVAPGRSRVIYRFLRNYFLPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCYFMPTAADGSVRALRKWLARF--GGPRWLVPDLSSLPP-TPDRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFY-------LGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGRN 595
             DWW+QWYP+A   D+D A PT+V LLG+  V+W     AD  K    TW  F D+CPHRLAPLSEGRID R G+LQCAYHGW FSG G C  IPQ +PE     A A RS RACA ++P L AQGM+W+WPD S +G+EAS++  P+ + ++ D   +    V RD+ YG+DTL+EN +DP+H+PFAHH + + R+ A  ++  ++           +  K G   SLP                   R+A+                       ++ F  PT L+ + + T  F ++P +    + E+ +R           +VTY +PV PGRSR++  F RN+F          P W+ H     VLD D VFLHGQERE          ++DR ++MPT +D  VRA R+WL R+  GGPRW     S+LPP + DR  L+DRY  HT  C  CRGALRN++ L+ +   MS++            +LG+ +   +A  F       GS  + R E+R  F  + H   
Sbjct:  100 IDWWRQWYPMAFLDDLDPARPTQVELLGKLFVIW-----ADHDK----TWHAFEDQCPHRLAPLSEGRIDER-GNLQCAYHGWSFSGQGGCVNIPQAEPEIK---AVAERSGRACAKAVPLLVAQGMVWLWPDNSPDGMEASRSQLPSTVPELHDPAFIRGAWVTRDLMYGYDTLVENVVDPAHVPFAHHGVQAQRSMAMPLNVSLN-----------YVGKEGVFLSLP-------------------RLAN----------------------STIEFHAPTRLHYLFDFTGFFQRVPLMKWAFRLEKWLRRLPPDTRPRSSLVTYTIPVGPGRSRILALFPRNFFAIN------KPRWLDHLERNAVLDGDLVFLHGQEREMRRPELKWEENIDRAFYMPTKSDEGVRAFRQWLVRWGAGGPRWADGVDSALPPRSNDRHFLMDRYTQHTTQCSACRGALRNIRVLKGVTAAMSLVCMTAIWTPRPASVLGKILGAGVAMAF-------GSWQMARLEKRMLFIDYVHAHK 555          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|1035921919|gb|OAY51508.1| (hypothetical protein MANES_04G012500 [Manihot esculenta])

HSP 1 Score: 289.656 bits (740), Expect = 4.794e-87
Identity = 186/531 (35.03%), Postives = 267/531 (50.28%), Query Frame = 0
Query:   77 ENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLM-KDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYF---LPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCY----FMPTAADGSVRALRKWLARFGG--PRWLVP-DLSSLPPTP-DRRTLLDRYESHTKSCKICRGALRNLKRLRQ-LIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGR 594
            E+G E  D  F W   WYPV+L  D+D ++PT   LLGRDLVLW +         A + W  F D+CPHRLAPLSEGRID   GHLQC+YHGW F+G G C++IPQ  PE  +  A A++S RACAT  PT+ +QG+++VWPD  + G E ++A KP ++  D D+ E S + + RD+ YG+DTL+EN  DPSH+ FAHH +   R++A  +  +++     GF                                         N+ + R   + +AP                 Y +  V  I  K+P +  ++  I I ++ VP+APG++R I    RN+F   +P  +W +  P W +H    +V D D + L GQE+     S   + DV++ Y    F PT AD  V A R WL R G   P+W V  D   LP T   +R +LDR+E HT+ C  CR A    + L++ LIG     +   G+     +  L  G F +L    + ++ + E  F F  + H  
Sbjct:   74 ESGEESSDSKFSWRDHWYPVSLVEDLDPSLPTPFQLLGRDLVLWFDK--------ASQQWVAFDDKCPHRLAPLSEGRID-ENGHLQCSYHGWSFAGCGSCTRIPQASPEGPE--ARAVKSPRACATRFPTMVSQGLLFVWPD--ENGWERAQATKPPMLPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLEASGPWGFAG--------------------------------------ANDGNPRISAKFVAP----------------CYYINKVE-IDTKLPIVGDQKWKIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQLVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKSKEGSTDVNQDYTKLTFTPTQADRFVLAFRNWLRRHGNSQPQWFVSTDQQPLPSTVLSKRQMLDRFEQHTQKCSSCRRAHTAFQTLQKILIGATVAFSATAGIPSDLWFRVLLAG-FAILSAGLAYILNQLERNFVFVDYVHAE 535          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|802551206|ref|XP_012064674.1| (pheophorbide a oxygenase, chloroplastic [Jatropha curcas] >gi|643737966|gb|KDP43954.1| hypothetical protein JCGZ_05421 [Jatropha curcas])

HSP 1 Score: 286.96 bits (733), Expect = 5.709e-86
Identity = 182/530 (34.34%), Postives = 261/530 (49.25%), Query Frame = 0
Query:   77 ENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLM-KDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYF---LPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCY----FMPTAADGSVRALRKWLARFGG--PRWLVPDLSSLPPTP-DRRTLLDRYESHTKSCKICRGALRNLKRLRQ-LIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGR 594
            E+G E  D  F W   WYPV+L  D+D  +PT   LLGRDLVLW +         A + W  F D+CPHRLAPLSEGRID   GHLQC+YHGW F G G C++IPQ  PE  +  A A++S RACAT  PT+ +QG+++VWPD  + G E ++A KP ++  D D  E S + + RD+ YG+DTL+EN  DPSH+ FAHH +   R++A  +  +++     GF                                         NE + R   + IAP                    IN   I  K+P +  ++ +I I ++ VP+APG +R I    RN+F   +P  +W +  P W +H    +V D D + L GQE+     S   +AD+++ Y    F PT AD  V A R WL R G   P W       LP T   +R +LDR+E HT+ C  C+ A    + L++ LIG     +   G+     +  L  G   ++    + ++ + E+ F +  + H  
Sbjct:   78 ESGEESSDSKFSWRDHWYPVSLVEDLDPRLPTPFKLLGRDLVLWFDK--------ANQEWVAFDDKCPHRLAPLSEGRID-ENGHLQCSYHGWSFDGCGSCTRIPQASPEGPE--ARAVKSPRACATRFPTMVSQGLLFVWPD--ENGWERAQATKPPMLPDDFDRPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLEGSGPWGFAG--------------------------------------ANEGNPRISAKFIAP-----------------CYYINKVEIDTKLPIVGNQKWIIWICSFNVPMAPGITRSIVCSARNFFQFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKSKEGSADINQQYTKLTFTPTQADRFVLAFRNWLRRHGNSQPEWFGNTKQPLPSTVLSKRQMLDRFEQHTQKCSSCKSAYSAFQILQKVLIGATVAFSATAGIPSDLQFRVLLAG-LAIVSAGLAYILNQLEKNFVYIDYVHAE 538          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|1201320648|gb|OVA19482.1| (Pheophorbide a oxygenase [Macleaya cordata])

HSP 1 Score: 279.256 bits (713), Expect = 7.614e-83
Identity = 179/522 (34.29%), Postives = 257/522 (49.23%), Query Frame = 0
Query:   87 FDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLM-KDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYF---LPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCY----FMPTAADGSVRALRKWLARFGG--PRWL--VPDLSSLPPTP-DRRTLLDRYESHTKSCKICRGALRNLKRLRQ-LIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGR 594
            F W   WYPV+L  D+D  +PT   LL R++VLW++ +  D        W  F D+CPHRLAPLSEGRID   G+LQC+YHGW F   G C +IPQ  PE  +  A A+RS RAC T  PTL +QG+++VWPD  ++G E + A KPT++  D D  E S + + RD+ YG+DTL+EN  DPSH+ FAHH +   R++A  +  +V+     GF         G     P IS              A  +A C                                   +N   I  K+P + +++  I I ++ +P+APG++R I    RN+F   +P  +W +  P W +H    +V D D + L GQE+     S  A++DV+  Y    F PT AD  V A R W+ R G   P W      L +LP T   +R +LDR+E HT  C  C+GA    + L++ LIG   V     G+  + +  R+  G   +L    +  +   ++ F F  + H  
Sbjct:   98 FSWRDHWYPVSLIEDLDPKLPTPFQLLNREIVLWKDRSTGD--------WIAFDDKCPHRLAPLSEGRID-EDGNLQCSYHGWSFDKCGSCVRIPQASPEGPE--ARAIRSPRACVTRFPTLVSQGLLFVWPD--EKGWEKASATKPTMLPDDFDNPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVESSGVWGF--------AGANEGNPRIS--------------AEFVAPCY---------------------------------YMNKIEIDTKLPIVGEQKWKIWICSFNIPMAPGKTRSIVCSARNFFQFTMPGNAWWQVIPRWYEHWTSNKVYDGDMIVLQGQEKVFLSKSMEASSDVNNQYTKITFTPTQADRFVLAFRNWMRRHGNNQPEWFGHTNQLQTLPSTTFSKRQMLDRFEQHTLKCSSCKGAYNTFQTLQKVLIGATIVFCSTAGIPSE-MQLRIVLGGLALLSAGLAYALHELQKNFVFIDYVHAE 550          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|1009114333|ref|XP_015873629.1| (PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 279.256 bits (713), Expect = 9.630e-83
Identity = 180/532 (33.83%), Postives = 256/532 (48.12%), Query Frame = 0
Query:   77 ENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLM-KDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYF---LPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCY----FMPTAADGSVRALRKWLARFGG--PRWLVPDLSSLPPTP----DRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGR 594
            E G E     F W   WYPV+LT D+D  +PT   LLGRDLVLW + +           W  F D+CPHRLAPLSEGRID   G+LQC+YHGW F G G C KIPQ  PE  +  A A++S RACAT  PT+ +QG+++VWPD  + G E + A KP ++  D  + E S + + RD+ YG+DTL+EN  DPSH+ FAHH +   R++A  +  +++     GF         G     P IS              A  +A C                                   +N   I  K+PF+  ++ +I I ++ VP+APG++R I    RN+F   +P  +W +  P W +H    +V D D + L GQE+     S   + DV++ Y    F PT AD  V A R WL R G   P W     SS  P P     +R +LDRY+ HT  C  C+GA    + L++++   +V       +   + +R+      +L    +  +    + F F  + H  
Sbjct:   99 EFGEESSSSKFSWRDHWYPVSLTEDLDPGLPTPFQLLGRDLVLWNDKSTGQ--------WVAFDDKCPHRLAPLSEGRID-EDGNLQCSYHGWSFDGCGSCVKIPQASPEGPE--ARAIKSPRACATRFPTMVSQGLLFVWPD--ENGWERANATKPPMLPDDFGKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGPWGF--------AGANEGNPRIS--------------AEFVAPCY---------------------------------YMNKIEIDTKLPFVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQIVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSESMEGSTDVNKEYTKITFTPTQADRLVLAFRNWLRRHGNSQPEWF--GKSSQQPLPSTVLSKRQMLDRYDQHTLKCSSCKGAYTAFQTLQKVLIGATVAFSATAGIPSDMQSRIFLAVLALLSAGLAYALNELAKNFVFVDYVHAE 560          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|1009174621|ref|XP_015868436.1| (PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 278.87 bits (712), Expect = 1.130e-82
Identity = 180/532 (33.83%), Postives = 256/532 (48.12%), Query Frame = 0
Query:   77 ENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLM-KDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYF---LPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCY----FMPTAADGSVRALRKWLARFGG--PRWLVPDLSSLPPTP----DRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGR 594
            E G E     F W   WYPV+LT D+D  +PT   LLGRDLVLW + +           W  F D+CPHRLAPLSEGRID   G+LQC+YHGW F G G C KIPQ  PE  +  A A++S RACAT  PT+ +QG+++VWPD  + G E + A KP ++  D  + E S + + RD+ YG+DTL+EN  DPSH+ FAHH +   R++A  +  +++     GF         G     P IS              A  +A C                                   +N   I  K+PF+  ++ +I I ++ VP+APG++R I    RN+F   +P  +W +  P W +H    +V D D + L GQE+     S   + DV++ Y    F PT AD  V A R WL R G   P W     SS  P P     +R +LDRY+ HT  C  C+GA    + L++++   +V       +   + +R+      +L    +  +    + F F  + H  
Sbjct:   97 EFGEESSSSKFSWRDHWYPVSLTEDLDPGLPTPFQLLGRDLVLWNDKSTGQ--------WVAFDDKCPHRLAPLSEGRID-EDGNLQCSYHGWSFDGCGSCVKIPQASPEGPE--ARAIKSPRACATRFPTMVSQGLLFVWPD--ENGWERANATKPPMLPDDFGKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGPWGF--------AGANEGNPRIS--------------AEFVAPCY---------------------------------YMNKIEIDTKLPFVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQIVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSESMEGSTDVNKEYTKITFTPTQADRLVLAFRNWLRRHGNSQPEWF--GKSSQQPLPSTVLSKRQMLDRYDQHTLKCSSCKGAYTAFQTLQKVLIGATVAFSATAGIPSDMQSRIFLAVLALLSAGLAYALNELAKNFVFVDYVHAE 558          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|255565489|ref|XP_002523735.1| (PREDICTED: pheophorbide a oxygenase, chloroplastic [Ricinus communis] >gi|223537039|gb|EEF38675.1| pheophorbide A oxygenase, putative [Ricinus communis])

HSP 1 Score: 277.33 bits (708), Expect = 1.919e-82
Identity = 184/562 (32.74%), Postives = 267/562 (47.51%), Query Frame = 0
Query:   46 LQTYCHKFTKISLNMPAAARILSPASVIEAKENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMKD-VDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYF---LPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPS-AAADVDRCY----FMPTAADGSVRALRKWLARFGG--PRWLVPD-LSSLPPTP-DRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGR 594
            L T  +K + + +  P +  +          E+G E  D  F W   WYPV+L  D+D  +PT   LLGRDLVLW + T  +        W    D+CPHRLAPLSEGRID   GHLQC+YHGW F G G C++IPQ  PE  +  A A++S RACAT  PT+ +QG+++VWPD  + G E ++A KP ++ D  D+ E S + + RD+ YG+DTL+EN  DPSH+ FAHH +   R++A  +  +++     GF                                         NE + R   + +AP                    IN   I  K+P +  ++ +I I ++ VP+APG++R I    RN+    +P  +W +  P W +H    +V D D + L GQ  E+  LS S   ++V+  Y    F PT AD  V A R WL R G   P W   D    LP T   +R +LDR+E HT  C  CR A    + L++L+   +V       +   +  R+      +L      ++ + E  F    + H  
Sbjct:   38 LPTRTYKLSPLHVAAPPSPSVEKEEEYRVDDESGQESVDSKFSWRDHWYPVSLVEDLDPGLPTPFQLLGRDLVLWFDTTNQE--------WVALDDKCPHRLAPLSEGRID-ENGHLQCSYHGWSFDGCGSCTRIPQAMPEGPE--ARAVKSPRACATRFPTMVSQGLLFVWPD--ENGWERARASKPPMLPDNFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLAFKLEGSGPWGFAG--------------------------------------ANEGNPRISAKFVAP-----------------CYYINKIEIDTKLPIVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFLQFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ--EKIFLSESKEGSNVNEQYTKLTFTPTQADRFVLAFRNWLRRHGNSQPEWFSFDGQQPLPSTILSKRQMLDRFEQHTNKCSSCRKAYTAFRTLQKLLIGATVAFSATAGIPSDLNLRIILAGLAILSAVSVYILNQLENNFVHVDYVHAE 529          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|1191656855|gb|OTG08826.1| (putative pheophorbide a oxygenase family protein [Helianthus annuus])

HSP 1 Score: 277.33 bits (708), Expect = 2.863e-82
Identity = 185/552 (33.51%), Postives = 263/552 (47.64%), Query Frame = 0
Query:   56 ISLNMPAAARILSPASVIEAKENGIEEDDDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMKDVDEK-EMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYF---LPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQER-ERALLSPSAAADVDRCY----FMPTAADGSVRALRKWLARFGG--PRWL-VPDLSSLPPTP-DRRTLLDRYESHTKSCKICRGALRNLKRLRQLIGFMSVMAFYLGLLGQSVYTRLAGGFFTVLGITGSVVIKRFEERFYFQPWDHGR 594
            + +  P +      +S+    E   E+    F W   WYPV+L  D+D   PT   LL RDLV+W +             W    D+CPHRLAPLSEGRID   GHLQC+YHGW F G G C++IPQ    +D   A A+RS RACAT  PT+ +QG+++VWPD  + GVE +KA KP ++ D  EK E S + + RD+ YG+DTL+EN  DPSH+ FAHH +   R++A  +  ++D     GF         G     P IS              A  +A C                                   IN   I  K+P +  ++ +I I ++ VP+APG++R I    RN+F   +P  +W +  P W +H    +V D D + L GQE+   +  S   + DV++ Y    F PT AD  V A R WL R G   P W    +  SLP T   +R +LDRYE HT  C  C+ A +  + L++L+   +V+      +   +  RL      VL    +    + ++ F F  + H  
Sbjct:   52 LHVAAPPSPTTTDSSSMDIETEEADEKSSSKFSWKDHWYPVSLIEDLDPTRPTPFTLLNRDLVIWFDKVNDQ--------WVALDDKCPHRLAPLSEGRID-ENGHLQCSYHGWSFDGCGSCTRIPQA--SSDGPEARAVRSPRACATRFPTMVSQGLLFVWPD--ENGVERAKATKPPMLPDDFEKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSTGHWGFS--------GENEGNPKIS--------------AKFIAPCY---------------------------------YINKIEIDTKLPIVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKFFLSAQSTDGSIDVNKQYTKLTFTPTQADRFVLAFRNWLRRHGNSQPEWFGDANTQSLPSTYLSKREMLDRYEQHTLKCSSCKKAHKTFETLQKLLTGAAVVFCAAAGVPPEIQLRLIFAGLAVLSAGLAYYSHQLQKNFVFVDYVHAE 535          
BLAST of EWM27741.1 vs. NCBI_GenBank
Match: gi|1130846277|dbj|GAV73168.1| (Rieske domain-containing protein/PaO domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 275.789 bits (704), Expect = 1.018e-81
Identity = 177/483 (36.65%), Postives = 244/483 (50.52%), Query Frame = 0
Query:   84 DDAFDWWKQWYPVALTRDIDGAVPTKVMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQGGAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLM-KDVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNSLTKDKHADAHRMADCINELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAIFDKIPFLPKRERLIRIVTYAVPVAPGRSRVIYRFLRNYF---LPPFSWMRWPPEWIQHQRILRVLDSDTVFLHGQERERALLSPSAAADVDRCY----FMPTAADGSVRALRKWLARFGG--PRWLVP-DLSSLPPTP-DRRTLLDRYESHTKSCKICRGALRNLKRLRQ-LIGFMSVMAFYLGL 553
            D  F W   WYPV+L  D+D A+PT   LLGRDLVLW +  A        + W    D+CPHRLAPLSEGRID   GHLQC+YHGW F GSG C++IPQ   E  +  A A+RS RACAT  PT+ +QG+++VWPD  + G E +KA KP ++  D +  E S + + RD+ YG+DTL+EN  DPSH+ FAHH +   R++A  +  +++     GF         G     P IS              A  +A C                                   +N   I  K+P +  ++ +I I ++ VP+APG++R I    RN+F   +P  +W +  P W +H    +V D D + L GQE+     S   ++D+++ Y    F+PT AD  V A R WL R G   P W    +  SLP T   +R +LDR+E HT  C  CRGA    +   + LIG   V     G+
Sbjct:   83 DSKFSWRDHWYPVSLVEDLDPALPTPFQLLGRDLVLWFDKNA--------KQWVALDDKCPHRLAPLSEGRID-ENGHLQCSYHGWSFDGSGSCTRIPQASSEGPE--ARAVRSPRACATKFPTMVSQGLLFVWPD--ENGWERAKAAKPPMLPADFENPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMESSGPWGF--------AGSSDGNPRIS--------------AQFVAPCY---------------------------------YMNKIEIDTKLPIVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQIVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKSMEDSSDINQQYTKITFVPTQADRFVLAFRNWLRRHGNSQPEWFGSRNEQSLPSTVLSKRQMLDRFEQHTLKCSSCRGAYNAFQTWEKVLIGATVVCCVTAGI 497          
The following BLAST results are available for this feature:
BLAST of EWM27741.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110014|gb|EWM27741.1|0.000e+0100.00pheophorbide a oxygenase [Nannochloropsis gaditana... [more]
gi|585108185|gb|EWM26188.1|2.862e-10238.01Pheophorbide a oxygenase [Nannochloropsis gaditana... [more]
gi|1035921919|gb|OAY51508.1|4.794e-8735.03hypothetical protein MANES_04G012500 [Manihot escu... [more]
gi|802551206|ref|XP_012064674.1|5.709e-8634.34pheophorbide a oxygenase, chloroplastic [Jatropha ... [more]
gi|1201320648|gb|OVA19482.1|7.614e-8334.29Pheophorbide a oxygenase [Macleaya cordata][more]
gi|1009114333|ref|XP_015873629.1|9.630e-8333.83PREDICTED: pheophorbide a oxygenase, chloroplastic... [more]
gi|1009174621|ref|XP_015868436.1|1.130e-8233.83PREDICTED: pheophorbide a oxygenase, chloroplastic... [more]
gi|255565489|ref|XP_002523735.1|1.919e-8232.74PREDICTED: pheophorbide a oxygenase, chloroplastic... [more]
gi|1191656855|gb|OTG08826.1|2.863e-8233.51putative pheophorbide a oxygenase family protein [... [more]
gi|1130846277|dbj|GAV73168.1|1.018e-8136.65Rieske domain-containing protein/PaO domain-contai... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2956rna2956Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications