EWM27711.1, cds2947 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|585109984|gb|EWM27711.1| (voltage-dependent anion-selective channel protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 587.415 bits (1513), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 Query: 1 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSKGVMAKLAAKYKHPSGISLDKLEFKSDGRVLGEASLDVDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTLSA 288 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSKGVMAKLAAKYKHPSGISLDKLEFKSDGRVLGEASLDVDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTLSA Sbjct: 1 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSKGVMAKLAAKYKHPSGISLDKLEFKSDGRVLGEASLDVDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTLSA 288
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|1173932090|gb|OQR84205.1| (voltage-dependent anion-selective channel protein [Achlya hypogyna]) HSP 1 Score: 148.673 bits (374), Expect = 1.637e-39 Identity = 100/290 (34.48%), Postives = 145/290 (50.00%), Query Frame = 0 Query: 1 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGEL-SSKGVMAKLAAKYKHPSGISLDKLEFKSDGRVLGEASLD---VDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 + FKD G+ AD LNDD+ + RKLK+K T +GVT+T+EG L ++K ++AKL A + H SGI+ KL+ + GR++GEA + VD+ LKL EDG + G + +YV S S +D N V G GF +K DY +A +EA++ + NL S VN V + A D+ +T+GG ++ +A+ AK++S LLSIA L F L SA +DAK++ D+HKFG G+TL Sbjct: 4 LLFKDIGKKAADTLNDDYDFSRKLKVKTKTANGVTFTTEGSLGANKAILAKLGASFNHSSGINFTKLQVTTQGRLIGEAEIANALVDN-LKLGFKLEDGANK--GSARQVGTVEAKYVQDN-FSIHSQLDFAGSNVTNAGVFHYENFVFGANTGFSL----------EKSAISDYGGAIAYKAVDFEATILAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTANNTLTVGGRYKANAETTYLAKINSEGLLSIASINKLRPFVSLTTSALIDAKNFDGDAHKFGFGITL 279
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|1173960648|gb|OQS06755.1| (voltage-dependent anion-selective channel protein [Thraustotheca clavata]) HSP 1 Score: 146.362 bits (368), Expect = 1.065e-38 Identity = 91/290 (31.38%), Postives = 156/290 (53.79%), Query Frame = 0 Query: 3 FKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSS-KGVMAKLAAKYKHPS--GISLDKLEFKSDGRVLGEASLD--VDSKLKLWVSAEDG-RQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 FKD ++ D+LNDD+ Y RKLKIK T +GVT+T+EG +++ K ++AK+ A ++ P G+++ KL+ + GR++ EA + + LK+ EDG R+ + + GKLG+EY P + L + D+ G V G+ V ++G ++ G A +N + K D+ LA ++ ++ S + + + + + A +DY V +T+GG + +A+ + K++S +S+A Q + F L SA +DAK + D+HKFGLGLT+ Sbjct: 6 FKDISKTANDVLNDDYDYSRKLKIKTKTANGVTFTTEGAMAANKSILAKVGANFRVPQIGGLTISKLQVTTAGRIVAEADIANAIVDNLKVSFKFEDGSRKVSASQV---GKLGLEYKQPAFTTNL-EADI-TGKNVTGAGVAVVSG---VIIGANAAFNVE------KSAVSDFGGALAFGGADYQVTIASKKSLKTVAAAFHHKPCKSTIYAASIDYDVQTAANALTLGGRYVANAETTFAGKVNSDGFVSLACVQKVTPFLSLTTSAHIDAKHFEGDAHKFGLGLTI 281
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|1173960932|gb|OQS07013.1| (voltage-dependent anion-selective channel protein [Thraustotheca clavata]) HSP 1 Score: 145.206 bits (365), Expect = 3.233e-38 Identity = 98/291 (33.68%), Postives = 148/291 (50.86%), Query Frame = 0 Query: 1 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSS-KGVMAKLAAKYKHPSGISLDKLEFKSDGRVLGEASLD---VDSKLKLWVSAEDG-RQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 + FKD G+ AD+LNDD+ + RKLK+K T +GVT+T+EG L++ K ++AKL A + H SGI+ KL+ + GR++GEA + VD+ LKL EDG + T + + G + +YV S S +D N V G GF +K DY + +EA++ + NL S VN V + A D+ +T+GG + +A+ AK+ S ++SIA Q L + L SA++DAK++ D+HKFG G+TL Sbjct: 4 LLFKDIGKKAADVLNDDYDFNRKLKVKTKTTNGVTFTTEGALNANKSILAKLGASFNHSSGINFTKLQVTTQGRLIGEAEIANALVDN-LKLGFKLEDGANKGTARQV---GTVEAKYVQDK-FSIHSQLDFSGSNITNAGVFHYENFVLGANTGFSL----------EKSAVSDYGGAIGYKVADFEATILAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTAANTLTVGGRYTANAETTYLAKIDSEGIVSIASIQKLRPYVSLTTSAQIDAKNFDGDAHKFGFGITL 279
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|953498424|emb|CEG40062.1| (voltage-dependent anion-selective channel [Plasmopara halstedii]) HSP 1 Score: 142.51 bits (358), Expect = 3.493e-37 Identity = 95/289 (32.87%), Postives = 146/289 (50.52%), Query Frame = 0 Query: 2 FFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSS-KGVMAKLAAKYKH-PSGISLDKLEFKSDGRVLGEASLD--VDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 FKD + ++L DD+ + RKLKIK +GVT+T+EG L++ K ++AK++ + H SG+ KL+ + GR + EA L + LKL EDG K G LG EY LS S+ D V+ TV+ S V++ + G G Q +N K + +NVGL+ + ++ + +Q S ++ + A LDY + + + +GG ++ D D K++S LS+A Q + + L S VDAK++ DSHKFGLGLTL Sbjct: 4 LFKDLASTAENVLRDDYDFSRKLKIKSKASNGVTFTTEGALNTNKSILAKVSGGFTHSASGVVFKKLQITTQGRFITEAELPNVLTEGLKLTFKLEDGSITKNTSAKQVGVLGAEYKQKN-LSFNSEADFVSN-TVSASAVLS---QNGFAVGGQTAFNVD------KSAIVQHNVGLSYTGADYVTTLVTKKNFGAVQASFHHHLSHHTVYAAVLDYDLKSASNTLVVGGRYKVDNDTTYCGKINSEGFLSLASIQRVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTL 281
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|669165106|ref|XP_008618115.1| (hypothetical protein SDRG_13795 [Saprolegnia diclina VS20] >gi|530730225|gb|EQC28467.1| hypothetical protein SDRG_13795 [Saprolegnia diclina VS20]) HSP 1 Score: 142.51 bits (358), Expect = 3.940e-37 Identity = 96/290 (33.10%), Postives = 144/290 (49.66%), Query Frame = 0 Query: 1 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSS-KGVMAKLAAKYKHPSGISLDKLEFKSDGRVLGEASLD---VDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 + FKD G+ AD LNDD+ + RKLK+K T +GVT+T+EG L++ K ++AKL A + H SGI+ KL+ + GR++GEA + VD+ LKL EDG + G + +YV S S +D N V G GF +K DY + +EA++ + NL S VN V + A D+ +T+GG ++ +A+ AK++S +SIA L + L SA++DAK++ D+HKFG G+TL Sbjct: 4 LLFKDIGKKAADTLNDDYDFNRKLKVKTKTANGVTFTTEGALAANKTILAKLGASFNHSSGINFTKLQVTTQGRLIGEAEIANALVDN-LKLGFKLEDGANK--GSARQVGSVEAKYVQDN-FSIHSTLDFAGSNVSNAGVFHYENFVLGANTGFSL----------EKSAISDYGGAIGYKVADFEATILAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTAGNTLTVGGRYKANAETTYLAKINSEGFVSIASINKLRPYVSLTTSAQIDAKNFDGDAHKFGFGITL 279
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|695431826|ref|XP_009530783.1| (hypothetical protein PHYSODRAFT_354972 [Phytophthora sojae] >gi|348673535|gb|EGZ13354.1| hypothetical protein PHYSODRAFT_354972 [Phytophthora sojae]) HSP 1 Score: 141.739 bits (356), Expect = 8.089e-37 Identity = 93/290 (32.07%), Postives = 149/290 (51.38%), Query Frame = 0 Query: 1 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSS-KGVMAKLAAKYKH-PSGISLDKLEFKSDGRVLGEASLD--VDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 + +KD ++ ++L DD+ + RKLKIK +GV++T+EG L++ K ++AK++ + H SG+ KL+ + GRV+ EA L + LKL EDG K G LG EY L+ S+ D V+ TV+ + V++ + G G Q +N K + +NVG + + S+ + + +Q S ++ + A LDY + + + +GG ++ DAD K+ S LS+A Q + + L S VDAK++ DSHKFGLGLTL Sbjct: 3 VLYKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGALNANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTQGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQSN-LAVNSEADFVS-NTVSAAAVLS---QGGFAVGGQTAFNMD------KSAIVQHNVGASYTGADFVTSLVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASNTLVVGGRYKADADTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTL 281
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|813189281|ref|XP_012207529.1| (hypothetical protein SPRG_13142 [Saprolegnia parasitica CBS 223.65] >gi|641527439|gb|KDO21726.1| hypothetical protein SPRG_13142 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 141.354 bits (355), Expect = 1.070e-36 Identity = 96/290 (33.10%), Postives = 144/290 (49.66%), Query Frame = 0 Query: 1 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSS-KGVMAKLAAKYKHPSGISLDKLEFKSDGRVLGEASLD---VDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 + FKD G+ AD LNDD+ + RKLK+K T +GVT+T+EG L++ K ++AKL A + H SGI+ KL+ + GR++GEA + VD+ LKL EDG + G + +YV S S +D N V G GF +K DY + +EA++ + NL S VN V + A D+ +T+GG ++ +A+ AK++S +SIA L + L SA++DAK++ D+HKFG G+TL Sbjct: 4 LLFKDIGKKAADTLNDDYDFNRKLKVKTKTTNGVTFTTEGALAANKTILAKLGASFNHSSGINFTKLQVTTQGRLIGEAEIANALVDN-LKLGFKLEDGANK--GSARQVGSVEAKYVQDN-FSIHSTLDFAGSNVSNAGVFHYENFVLGANTGFSL----------EKSAISDYGGAIGYKVADFEATLLAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTAGNTLTVGGRYKANAETTYLAKINSEGFVSIASINKLRPYVSLTTSAQIDAKNFDGDAHKFGFGITL 279
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|698807882|ref|XP_009836970.1| (hypothetical protein H257_11671 [Aphanomyces astaci] >gi|574108035|gb|ETV73544.1| hypothetical protein H257_11671 [Aphanomyces astaci]) HSP 1 Score: 140.969 bits (354), Expect = 1.273e-36 Identity = 96/289 (33.22%), Postives = 153/289 (52.94%), Query Frame = 0 Query: 3 FKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGEL-SSKGVMAKLAAKYKHPSGISLDKLEFKSDGRVLGEASLD---VDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVV-NGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 FKD G+ + ++DD+ + RKLKIK + +GVT+T+EG L ++K ++AKL A + H SG+++ KL+ + GR++GEA ++ VD+ LKL EDG GK K + ++Y + +++DVV N T NG + + G +++ + K DY +A +EAS+ + NL S + + VT+ A D+ +T+GG + D D AK+ S +LS+A Q L F L SA+VD K++ D+HKFG G+TL Sbjct: 6 FKDIGKKANNTISDDYDFSRKLKIKTKSTNGVTFTTEGALGANKSILAKLGASFSHSSGLNVTKLQVTTQGRLIGEAEINNALVDN-LKLGFKLEDG----GKNAKQVAIVDLKYTQDA-FTTHTEIDVVGNNVTQNGVFHYD-----NFVVGGTTSFSLE------KQAVADYGGAVAYKAADFEASIVAKKFCKNLVTSFVHTPSKDVTYSAVYDFDSKTGGNSLTVGGRYAADKDTTYLAKVDSEGILSLASIQKLRPFVSLTTSAQVDVKNFEGDAHKFGFGITL 277
BLAST of EWM27711.1 vs. NCBI_GenBank
Match: gi|698807968|ref|XP_009837013.1| (hypothetical protein H257_11706 [Aphanomyces astaci] >gi|574108078|gb|ETV73587.1| hypothetical protein H257_11706 [Aphanomyces astaci]) HSP 1 Score: 140.969 bits (354), Expect = 1.614e-36 Identity = 94/291 (32.30%), Postives = 149/291 (51.20%), Query Frame = 0 Query: 2 FFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSS-KGVMAKLAAKYKHPS--GISLDKLEFKSDGRVLGEASLD---VDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286 +KD + ++LNDD+ + RKLKIK T +GVT+T+EG +++ K ++AKL A + P G+++ KL+ + GRV+ EA ++ VD+ LK+ EDG + T + KLG+EY P + + DV T N + V LA G+ G +N K DY LA ++ +V + + + + + + + A +DY V +T+GG + D D K++S +S+A Q + F L SA +DAK + DSHKFGLGLT+ Sbjct: 5 LYKDVSKKATNVLNDDYDFSRKLKIKTKTANGVTFTTEGAMAANKSILAKLGASFVVPQIGGLTVSKLQVTTQGRVIVEADINNALVDN-LKVTAKVEDGSRKTNASQVT--KLGLEYKQP-TYTLTKEFDV----TANTASVSALAVVSGVTVGAHGAFNVN------KSAVSDYGGALAYNGGDFQVTVATKKSLKTINANFHHQFDANTIYAASIDYDVQTAANALTLGGRYAVDKDTTYLGKVNSDGFVSLAVVQKVTPFLSLTTSAHIDAKHFEGDSHKFGLGLTI 281 The following BLAST results are available for this feature:
BLAST of EWM27711.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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