EWM27735.1, cds2940 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|585110008|gb|EWM27735.1| (Protein of unknown function DUF3228 [Nannochloropsis gaditana]) HSP 1 Score: 511.916 bits (1317), Expect = 0.000e+0 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query: 1 MKICSSVLAISVIYAGAFPSAAPVFISWIVQPRPLASKRHYHCRGTMTAKHDIVVDDFCLRQFSQEENYSKIRLPPSEFEEQVNAYYQANPTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNHSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
MKICSSVLAISVIYAGAFPSAAPVFISWIVQPRPLASKRHYHCRGTMTAKHDIVVDDFCLRQFSQEENYSKIRLPPSEFEEQVNAYYQANPTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNHSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR
Sbjct: 1 MKICSSVLAISVIYAGAFPSAAPVFISWIVQPRPLASKRHYHCRGTMTAKHDIVVDDFCLRQFSQEENYSKIRLPPSEFEEQVNAYYQANPTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNHSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|929770020|ref|XP_014159943.1| (hypothetical protein SARC_01800 [Sphaeroforma arctica JP610] >gi|906957749|gb|KNC86041.1| hypothetical protein SARC_01800 [Sphaeroforma arctica JP610]) HSP 1 Score: 226.098 bits (575), Expect = 3.248e-71 Identity = 113/200 (56.50%), Postives = 145/200 (72.50%), Query Frame = 0
Query: 48 TAKHDIVVDDFCLRQFSQEENYS--KIRLPPSEFEEQVNAYYQAN-PTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNHSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
++ H V+DDF +RQF + NY+ +I+ PSEFE +VN +Y + TL DGYAPFCKH+F+PNF G++ G + IT++N LL++ YEAR EKELPVL+R+F E+V A LDIILYS+EQI KENE M N K + +PWGI+SVK Q DYELPMQPITMLRNALGR GGSGV L++ +Y SV+FW HA +
Sbjct: 23 SSAHTFVMDDFAMRQF-DDPNYTGTRIKFDPSEFEAKVNEFYTSGEATLKDGYAPFCKHLFIPNFCGVKCGYARITADNRSLLQTEYEARSEKELPVLVRFFKTEDVTAPDATHLDIILYSKEQIIKENEAMGNPGKIMS-APWGIISVKGQTKDYELPMQPITMLRNALGRDEGGSGVKLEREKYSESVNFWKEHASFK 220
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|298707970|emb|CBJ30341.1| (flagellar associated protein [Ectocarpus siliculosus]) HSP 1 Score: 221.861 bits (564), Expect = 4.240e-69 Identity = 119/246 (48.37%), Postives = 162/246 (65.85%), Query Frame = 0
Query: 9 AISVIYAGAFPSAAPVFISWIVQPRPL-----ASKRHYHCRGT-MTA--KHDIVVDDFCLRQFSQEE-NYSKIRLPPSEFEEQVNAYYQA-NPTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNHSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
A S+++A +A I +P PL AS+R Y T M+A +++V+D F +RQF+ E +K+ P EFE++VN ++A L +GYAPFCKH+F+PNFAG+++ T IT EN LL + YEAR KELP+L R+F V A FLDIILYSREQI+KE M KE + +PWGI+SVK QDVD+E+PMQPITM+RNALG+ GGSGV L++ +Y+ SV+FW HA ++
Sbjct: 7 ACSLLFAARASTACAFRIQAAARPCPLGFPAAASRRGYKSTTTAMSAPGGNELVMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGK-EKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 251
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|635370780|emb|CCI41043.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 225.713 bits (574), Expect = 3.738e-68 Identity = 106/199 (53.27%), Postives = 138/199 (69.35%), Query Frame = 0
Query: 49 AKHDIVVDDFCLRQFSQEE-NYSKIRLPPSEFEEQVNA-YYQANPTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKE-QNHSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
KHD+V+D FC RQF + N ++I EFE+++N Y Q N L+DGYAPFCKH+F+ NF R+ T IT N HLL S YEAR ELPVL+R+FP V A +LDIILY+R+QIQ EN+ + + QN +PWGI+S+K Q+VDYELPM PITM+RNALG+ GGSGV L++ QY+ SV+FW HA ++
Sbjct: 247 VKHDLVLDPFCFRQFDDPKYNGTRINFDKKEFEKRINEIYVQHNKKLIDGYAPFCKHLFVENFTDTRTNTVKITQANAHLLMSDYEARAAHELPVLVRWFPSHSVTPSMAKYLDIILYNRDQIQNENKATGTAMDQTQNEAPWGIISIKAQNVDYELPMTPITMMRNALGKEEGGSGVPLNRNQYIKSVEFWKNHANVK 445
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|325187396|emb|CCA21935.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325190309|emb|CCA24785.1| conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 220.32 bits (560), Expect = 2.911e-66 Identity = 104/199 (52.26%), Postives = 137/199 (68.84%), Query Frame = 0
Query: 49 AKHDIVVDDFCLRQFSQEE-NYSKIRLPPSEFEEQVNA-YYQANPTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKE-QNHSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
HD+V+D FC RQF + N ++I +EFE+++N Y + N LVDGYAPFCKH+F+ NF R+ IT N HLL S YEAR ELPVL+R+FP V A +LDIILY+R+QIQ EN+ + + Q+ +PWGI+S+K Q+VDYELPM PITM+RNALG+ GGSGV LD+ +YL SV+FW HA ++
Sbjct: 226 VNHDLVLDPFCFRQFDDAKYNGTRINYDKNEFEKRINEIYVKQNKNLVDGYAPFCKHLFVENFTDTRTNMVKITQANAHLLMSEYEARAAYELPVLVRWFPSHSVTPSMAKYLDIILYNRDQIQNENKATGTAMDQTQDEAPWGIISIKAQNVDYELPMTPITMMRNALGKEEGGSGVPLDRNKYLKSVEFWKNHANVK 424
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|118356530|ref|XP_001011521.1| (flagellar associated protein [Tetrahymena thermophila SB210] >gi|89293288|gb|EAR91276.1| flagellar associated protein [Tetrahymena thermophila SB210]) HSP 1 Score: 211.075 bits (536), Expect = 1.521e-65 Identity = 108/194 (55.67%), Postives = 137/194 (70.62%), Query Frame = 0
Query: 53 IVVDDFCLRQFSQEENYSK-IRLPPSEFEEQVNAYYQANPTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQN-HSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
IV+D FCL+QF S + E +E +N Y + LVDGYAPFCKH+F+PNF + TS IT EN HLL+++YEAR EKELPVL RYFP V + A+ LDIILYS+EQIQ EN M N+ ++ WG+VSVKPQ++DYE+PM PITM+RNALG+ GGSGV LD+ +YL SV+FWS +AII+
Sbjct: 6 IVIDPFCLKQFDPNVKTSTYVCSTVEEMQEHLNKIYDPS-KLVDGYAPFCKHLFIPNFTQTKLSTSKITPENEHLLKTIYEARTEKELPVLRRYFPVGSVPQEVASHLDIILYSKEQIQLENAAMGNVDPNKDIDYHWGVVSVKPQNLDYEIPMDPITMMRNALGKEEGGSGVPLDRKKYLESVEFWSKNAIIK 198
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|566030513|gb|ETI53424.1| (hypothetical protein F443_03620 [Phytophthora parasitica P1569] >gi|567968115|gb|ETK93265.1| hypothetical protein L915_03514 [Phytophthora parasitica] >gi|567996565|gb|ETL46672.1| hypothetical protein L916_03465 [Phytophthora parasitica] >gi|568025815|gb|ETL99817.1| hypothetical protein L917_03385 [Phytophthora parasitica] >gi|568056263|gb|ETM52975.1| hypothetical protein L914_03489 [Phytophthora parasitica] >gi|570334196|gb|ETO82144.1| hypothetical protein F444_03689 [Phytophthora parasitica P1976] >gi|570958233|gb|ETP23212.1| hypothetical protein F441_03615 [Phytophthora parasitica CJ01A1] >gi|570994004|gb|ETP51218.1| hypothetical protein F442_03600 [Phytophthora parasitica P10297] >gi|970660780|gb|KUF98303.1| Uroporphyrinogen-III synthase [Phytophthora nicotianae]) HSP 1 Score: 212.231 bits (539), Expect = 2.333e-65 Identity = 109/200 (54.50%), Postives = 140/200 (70.00%), Query Frame = 0
Query: 50 KHDIVVDDFCLRQFSQEENYS--KIRLPPSEFEEQVNAYYQAN-PTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNH--SPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
+ DIV+D F RQF ++ YS +I EF ++VN Y+AN LVDGYAPFCKH+F+ NF G R IT N H+L S YEAR E ELPVL R+FP V K A +LDIILYSREQI KENE ++ + +H SPWGIVS+K QDVD+ELPM+PITM+RNA+G+ GGSGV LD+ +Y+ +V++W HA+I+
Sbjct: 48 RGDIVLDGFAKRQFD-DKTYSGTQIDFDKKEFVKKVNEIYEANNKQLVDGYAPFCKHLFIKNFTGARLNMVAITQANAHMLMSDYEARTEYELPVLGRWFPSHSVTPKVAEYLDIILYSREQIIKENE-AVDVPADPDHGDSPWGIVSIKAQDVDHELPMKPITMMRNAVGKEQGGSGVPLDRDEYMKAVEYWRNHAVIK 245
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|570994005|gb|ETP51219.1| (hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 211.075 bits (536), Expect = 2.818e-65 Identity = 109/200 (54.50%), Postives = 140/200 (70.00%), Query Frame = 0
Query: 50 KHDIVVDDFCLRQFSQEENYS--KIRLPPSEFEEQVNAYYQAN-PTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNH--SPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
+ DIV+D F RQF ++ YS +I EF ++VN Y+AN LVDGYAPFCKH+F+ NF G R IT N H+L S YEAR E ELPVL R+FP V K A +LDIILYSREQI KENE ++ + +H SPWGIVS+K QDVD+ELPM+PITM+RNA+G+ GGSGV LD+ +Y+ +V++W HA+I+
Sbjct: 25 RGDIVLDGFAKRQFD-DKTYSGTQIDFDKKEFVKKVNEIYEANNKQLVDGYAPFCKHLFIKNFTGARLNMVAITQANAHMLMSDYEARTEYELPVLGRWFPSHSVTPKVAEYLDIILYSREQIIKENE-AVDVPADPDHGDSPWGIVSIKAQDVDHELPMKPITMMRNAVGKEQGGSGVPLDRDEYMKAVEYWRNHAVIK 222
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|675183881|ref|XP_008900825.1| (hypothetical protein PPTG_08476 [Phytophthora parasitica INRA-310] >gi|568099032|gb|ETN13750.1| hypothetical protein PPTG_08476 [Phytophthora parasitica INRA-310]) HSP 1 Score: 212.231 bits (539), Expect = 2.837e-65 Identity = 109/200 (54.50%), Postives = 140/200 (70.00%), Query Frame = 0
Query: 50 KHDIVVDDFCLRQFSQEENYS--KIRLPPSEFEEQVNAYYQAN-PTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNH--SPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
+ DIV+D F RQF ++ YS +I EF ++VN Y+AN LVDGYAPFCKH+F+ NF G R IT N H+L S YEAR E ELPVL R+FP V K A +LDIILYSREQI KENE ++ + +H SPWGIVS+K QDVD+ELPM+PITM+RNA+G+ GGSGV LD+ +Y+ +V++W HA+I+
Sbjct: 48 RGDIVLDGFAKRQFD-DKTYSGTQIDFDKKEFVKKVNEIYEANNKQLVDGYAPFCKHLFIKNFTGARLNMVAITQANAHMLMSDYEARTEYELPVLGRWFPSHSVTPKVAEYLDIILYSREQIIKENE-AVDVPADPDHGDSPWGIVSIKAQDVDHELPMKPITMMRNAVGKEQGGSGVPLDRDEYMKAVEYWRNHAVIK 245
BLAST of EWM27735.1 vs. NCBI_GenBank
Match: gi|970655246|gb|KUF93435.1| (hypothetical protein AM587_10007889 [Phytophthora nicotianae]) HSP 1 Score: 211.846 bits (538), Expect = 3.566e-65 Identity = 109/200 (54.50%), Postives = 140/200 (70.00%), Query Frame = 0
Query: 50 KHDIVVDDFCLRQFSQEENYS--KIRLPPSEFEEQVNAYYQAN-PTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVALKPAAFLDIILYSREQIQKENEDMANLVKEQNH--SPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
+ DIV+D F RQF ++ YS +I EF ++VN Y+AN LVDGYAPFCKH+F+ NF G R IT N H+L S YEAR E ELPVL R+FP V K A +LDIILYSREQI KENE ++ + +H SPWGIVS+K QDVD+ELPM+PITM+RNA+G+ GGSGV LD+ +Y+ +V++W HA+I+
Sbjct: 48 RGDIVLDGFAKRQFD-DKTYSGTQIDFDKKEFVKKVNEIYEANNKQLVDGYAPFCKHLFIKNFTGARLNMVAITQANAHMLMSDYEARTEYELPVLGRWFPSHSVTPKVAEYLDIILYSREQIIKENE-AVDVPADPDHGDSPWGIVSIKAQDVDHELPMKPITMMRNAVGKEQGGSGVPLDRDEYMKAVEYWRNHAVIK 245 The following BLAST results are available for this feature:
BLAST of EWM27735.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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