EWM27731.1, cds2939 (CDS) Nannochloropsis gaditana

Overview
NameEWM27731.1
Unique Namecds2939
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:329165..329266 +
Alignment locationCM002460.1:329349..330599 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27731.1
Productl-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
Orig transcript idgnl|cribi|Naga_100034g33.6304.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:329165..329266 +
CM002460.1supercontigCM002460.1:329349..330599 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
GO:0000287magnesium ion binding
GO:0008897holo-[acyl-carrier-protein] synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR0082784-PPantetheinyl_Trfase_SF
Homology
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|585110004|gb|EWM27731.1| (l-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl [Nannochloropsis gaditana])

HSP 1 Score: 927.161 bits (2395), Expect = 0.000e+0
Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0
Query:    1 MSHSHAQRCSRGPSTCGAFFLPPGRSPRYSRLNSAKHIGEQLGDPSRAPTWYPNLLLSKMKRLCQWSAIKLSKSTPENLIEENLHVPTHTELTLAASDPGLPPLPPGLQGRALAAVHEGVLRLGMRIVAEPLSPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLPQWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGPKPTAHHLPSPGNVRHCAPCSACLYAPPSPSKGICGTSTAIATATPASSAPHDILRKKVCVLTIRDCLPLGVQAQWDALSLVGPIANRSSNTG 450
            MSHSHAQRCSRGPSTCGAFFLPPGRSPRYSRLNSAKHIGEQLGDPSRAPTWYPNLLLSKMKRLCQWSAIKLSKSTPENLIEENLHVPTHTELTLAASDPGLPPLPPGLQGRALAAVHEGVLRLGMRIVAEPLSPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLPQWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGPKPTAHHLPSPGNVRHCAPCSACLYAPPSPSKGICGTSTAIATATPASSAPHDILRKKVCVLTIRDCLPLGVQAQWDALSLVGPIANRSSNTG
Sbjct:    1 MSHSHAQRCSRGPSTCGAFFLPPGRSPRYSRLNSAKHIGEQLGDPSRAPTWYPNLLLSKMKRLCQWSAIKLSKSTPENLIEENLHVPTHTELTLAASDPGLPPLPPGLQGRALAAVHEGVLRLGMRIVAEPLSPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLPQWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGPKPTAHHLPSPGNVRHCAPCSACLYAPPSPSKGICGTSTAIATATPASSAPHDILRKKVCVLTIRDCLPLGVQAQWDALSLVGPIANRSSNTG 450          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|585102084|gb|EWM21752.1| (l-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Nannochloropsis gaditana])

HSP 1 Score: 166.007 bits (419), Expect = 3.666e-41
Identity = 99/285 (34.74%), Postives = 142/285 (49.82%), Query Frame = 0
Query:   97 SDPGLPPLPPGLQGRALAAVHEGVLRLGMRIVAEPLSPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSR--------------LPQWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPF---EAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEE------LMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            +DP  P LPP    R L  +  G+ RL + +    ++P  W L   L    +  K+QR+  +KDRRL+LGS LLQRA  +W  G  + +I I RT    KP+     +                P WNYNVSHHGD+V +ASEP   VG D+++  ++P        A ++ + F R L+  EW  +       E ++   FYR WA+KEAY+KAIG GLSF  RR+E + +D        E     EE      L +DG    DW+ +  +L   ++ C + GP
Sbjct:  367 ADPSAPTLPP----RLLPMISNGMARLVVNMKEAYMTPATWKLCYSLFRAEDAAKIQRFRFEKDRRLSLGSQLLQRAVIAWTFGVSYPEIVISRTEK-GKPFFKYTPTHPGEVPGEEETAQVPFPNWNYNVSHHGDFVGIASEPVCLVGLDIMNAKEKPRGGGRERGAHDFFKSFHRQLSATEWGSIYEA--PSEETKLERFYRQWALKEAYIKAIGSGLSFSPRRIEITGLD-------HEQRPYTEEAYDPSMLRIDGAERPDWKFKFSALDYGHVACVSRGP 637          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|953486620|emb|CEG49523.1| (l-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl [Plasmopara halstedii])

HSP 1 Score: 153.295 bits (386), Expect = 1.167e-39
Identity = 87/228 (38.16%), Postives = 125/228 (54.82%), Query Frame = 0
Query:  133 SPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLP--QWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            S  +W+ L+  L + +  +V RY  +KD++LALGS LLQR     V G  +  I I RT   NKPY N   + L    WNYNVSHHG  V +AS+    VG D+V + DRP +  +  +++  FK H  P EW+ +R    + E  QY+ FYR+W++KEAY+KA+GVGL F + R E + V +G D         +  +++DG    DW      +   +L   A GP
Sbjct:   15 SSTEWHQLLLQLPDHDQKQVMRYVFEKDQKLALGSRLLQRKLIQEVSGLNYDAIKIARTPE-NKPYWNRDRNSLAPLLWNYNVSHHGTIVAIASDSRALVGVDVVRLTDRPNQTTSIHDFIRAFKSHFNPREWKYIRGSSIEEEDDQYKRFYRLWSLKEAYIKAVGVGLGFSLLRAEFNQVKLGRD--------DQWNIILDGQQSNDWHFTSTQVDDVHLISVAYGP 233          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|553191099|ref|XP_005855320.1| (4'-phosphopantetheinyl transferase [Nannochloropsis gaditana CCMP526] >gi|422293739|gb|EKU21039.1| 4'-phosphopantetheinyl transferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 151.754 bits (382), Expect = 1.742e-38
Identity = 91/266 (34.21%), Postives = 133/266 (50.00%), Query Frame = 0
Query:  116 VHEGVLRLGMRIVAEPLSPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSR--------------LPQWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPF---EAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEE------LMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            +  G+ RL + +    ++P  W L   L    +  K+QR+  +KDRRL+LGS LLQRA  +W  G  + +I I RT    KP+     +                P WNYNVSHHGD+V +ASEP   VG D+++  ++P        A ++ + F R L+  EW  +       E ++   FYR WA+KEAY+KAIG GLSF  RR+E + +D        E     EE      L +DG    DW+ +  +L   ++ C + GP
Sbjct:    2 ISNGMARLVVNMKEAYMTPATWKLCYSLFRAEDAAKIQRFRFEKDRRLSLGSQLLQRAVIAWTFGVSYPEIVISRTEK-GKPFFKYTPTHPGEVPGEEETAQVPFPNWNYNVSHHGDFVGIASEPVCLVGLDIMNAKEKPRGGGRERGAHDFFKSFHRQLSATEWGSIYEA--PSEETKLERFYRQWALKEAYIKAIGSGLSFSPRRIEITGLD-------HEQRPYTEEAYDPSMLRIDGAERPDWKFKFSALDYGHVACVSRGP 257          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|570325495|gb|ETO73443.1| (hypothetical protein F444_10623 [Phytophthora parasitica P1976])

HSP 1 Score: 144.821 bits (364), Expect = 1.678e-36
Identity = 84/227 (37.00%), Postives = 121/227 (53.30%), Query Frame = 0
Query:  133 SPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLP-QWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            + ++W  L+  L + E  +V R+   KD++LAL S LLQR     + G ++  I I RT   NKPY N   +  P  WNYNVSHHG  V +AS+    VG D+V + DRP    +  E+   F  H  P EW+ +R  G   E  +Y  FYR+W++KEAY+KA+G+GL F + R E   V++  D           EL +DG + +DW      +  ++L   A GP
Sbjct:   17 TSEEWRRLLLQLPDHEQKQVMRFMFAKDQKLALASRLLQRQLIHELFGVKYDTIAIARTPE-NKPYWNRLGNLAPISWNYNVSHHGTVVAIASDSRALVGVDVVRLTDRPHRKTSIEEFFRAFADHFNPGEWEYIR--GATDEDGRYTRFYRLWSLKEAYIKAVGIGLGFSLLRAEFVCVNLTGD--------NHWELRLDGTLSSDWHFTSTQIDAAHLVSVAYGP 232          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|675169389|ref|XP_008893579.1| (hypothetical protein PPTG_01938 [Phytophthora parasitica INRA-310] >gi|568107223|gb|ETN21853.1| hypothetical protein PPTG_01938 [Phytophthora parasitica INRA-310])

HSP 1 Score: 144.821 bits (364), Expect = 1.849e-36
Identity = 84/227 (37.00%), Postives = 121/227 (53.30%), Query Frame = 0
Query:  133 SPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLP-QWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            + ++W  L+  L + E  +V R+   KD++LAL S LLQR     + G ++  I I RT   NKPY N   +  P  WNYNVSHHG  V +AS+    VG D+V + DRP    +  E+   F  H  P EW+ +R  G   E  +Y  FYR+W++KEAY+KA+G+GL F + R E   V++  D           EL +DG + +DW      +  ++L   A GP
Sbjct:   20 TSEEWRRLLLQLPDHEQKQVMRFMFAKDQKLALASRLLQRQLIHELFGVKYDTIAIARTPE-NKPYWNRLGNLAPISWNYNVSHHGTVVAIASDSRALVGVDVVRLTDRPHRKTSIGEFFRAFADHFNPGEWEYIR--GATDEDGRYTRFYRLWSLKEAYIKAVGIGLGFSLLRAEFVCVNLTGD--------NHWELRLDGTLSSDWHFTSTQIDAAHLVSVAYGP 235          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|566021867|gb|ETI44778.1| (hypothetical protein F443_10533 [Phytophthora parasitica P1569])

HSP 1 Score: 144.821 bits (364), Expect = 1.888e-36
Identity = 84/227 (37.00%), Postives = 121/227 (53.30%), Query Frame = 0
Query:  133 SPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLP-QWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            + ++W  L+  L + E  +V R+   KD++LAL S LLQR     + G ++  I I RT   NKPY N   +  P  WNYNVSHHG  V +AS+    VG D+V + DRP    +  E+   F  H  P EW+ +R  G   E  +Y  FYR+W++KEAY+KA+G+GL F + R E   V++  D           EL +DG + +DW      +  ++L   A GP
Sbjct:   20 TSEEWRRLLLQLPDHEQKQVMRFMFAKDQKLALASRLLQRQLIHELFGVKYDTIAIARTPE-NKPYWNRLGNLAPISWNYNVSHHGTVVAIASDSRALVGVDVVRLTDRPHRKTSIEEFFRAFADHFNPGEWEYIR--GATDEDGRYTRFYRLWSLKEAYIKAVGIGLGFSLLRAEFVCVNLTGD--------NHWELRLDGTLSSDWHFTSTQIDAAHLVSVAYGP 235          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|567959210|gb|ETK84787.1| (hypothetical protein L915_10290 [Phytophthora parasitica])

HSP 1 Score: 144.821 bits (364), Expect = 1.907e-36
Identity = 84/227 (37.00%), Postives = 121/227 (53.30%), Query Frame = 0
Query:  133 SPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLP-QWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            + ++W  L+  L + E  +V R+   KD++LAL S LLQR     + G ++  I I RT   NKPY N   +  P  WNYNVSHHG  V +AS+    VG D+V + DRP    +  E+   F  H  P EW+ +R  G   E  +Y  FYR+W++KEAY+KA+G+GL F + R E   V++  D           EL +DG + +DW      +  ++L   A GP
Sbjct:   20 TSEEWRRLLLQLPDHEQKQVMRFMFAKDQKLALASRLLQRQLIHELFGVKYDTIAIARTPE-NKPYWNRLGNLAPISWNYNVSHHGTVVAIASDSRALVGVDVVRLTDRPHRKTSIEEFFRAFADHFNPGEWEYIR--GATDEDGRYTRFYRLWSLKEAYIKAVGIGLGFSLLRAEFVCVNLTGD--------NHWELRLDGTLSSDWHFTSTQIDAAHLVSVAYGP 235          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|568017124|gb|ETL91301.1| (hypothetical protein L917_10130 [Phytophthora parasitica] >gi|570949367|gb|ETP14624.1| hypothetical protein F441_10470 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 144.05 bits (362), Expect = 2.789e-36
Identity = 84/227 (37.00%), Postives = 121/227 (53.30%), Query Frame = 0
Query:  133 SPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLP-QWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            + ++W  L+  L + E  +V R+   KD++LAL S LLQR     + G ++  I I RT   NKPY N   +  P  WNYNVSHHG  V +AS+    VG D+V + DRP    +  E+   F  H  P EW+ +R  G   E  +Y  FYR+W++KEAY+KA+G+GL F + R E   V++  D           EL +DG + +DW      +  ++L   A GP
Sbjct:   17 TSEEWRRLLLQLPDHEQKQVTRFMFVKDQKLALASRLLQRQLIHELFGVKYDTIAIARTPE-NKPYWNRLGNLAPISWNYNVSHHGTVVAIASDSRALVGVDVVRLTDRPHRKTSIEEFFRAFADHFNPGEWEYIR--GATDEDGRYTRFYRLWSLKEAYIKAVGIGLGFSLLRAEFVCVNLTGD--------NHWELRLDGTLSSDWHFTSTQIDAAHLVSVAYGP 232          
BLAST of EWM27731.1 vs. NCBI_GenBank
Match: gi|568047569|gb|ETM44647.1| (hypothetical protein L914_10152 [Phytophthora parasitica])

HSP 1 Score: 144.436 bits (363), Expect = 2.917e-36
Identity = 84/227 (37.00%), Postives = 121/227 (53.30%), Query Frame = 0
Query:  133 SPDQWNLLIRLLSESEGGKVQRYYHDKDRRLALGSILLQRAATSWVLGKRFSDINIERTRTYNKPYVNAKDSRLP-QWNYNVSHHGDWVVLASEPFHAVGTDLVDVGDRPFEAMTALEYLEHFKRHLTPAEWQGLRSVGRDGEASQYRAFYRVWAMKEAYVKAIGVGLSFPVRRLECSIVDVGADLTGMETDGVEEELMMDGYIMTDWRLRLVSLPPSYLWCTAVGP 358
            + ++W  L+  L + E  +V R+   KD++LAL S LLQR     + G ++  I I RT   NKPY N   +  P  WNYNVSHHG  V +AS+    VG D+V + DRP    +  E+   F  H  P EW+ +R  G   E  +Y  FYR+W++KEAY+KA+G+GL F + R E   V++  D           EL +DG + +DW      +  ++L   A GP
Sbjct:   20 TSEEWRRLLLQLPDHEQKQVTRFMFVKDQKLALASRLLQRQLIHELFGVKYDTIAIARTPE-NKPYWNRLGNLAPISWNYNVSHHGTVVAIASDSRALVGVDVVRLTDRPHRKTSIEEFFRAFADHFNPGEWEYIR--GATDEDGRYTRFYRLWSLKEAYIKAVGIGLGFSLLRAEFVCVNLTGD--------NHWELRLDGTLSSDWHFTSTQIDAAHLVSVAYGP 235          
The following BLAST results are available for this feature:
BLAST of EWM27731.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110004|gb|EWM27731.1|0.000e+0100.00l-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
gi|585102084|gb|EWM21752.1|3.666e-4134.74l-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
gi|953486620|emb|CEG49523.1|1.167e-3938.16l-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
gi|553191099|ref|XP_005855320.1|1.742e-3834.214'-phosphopantetheinyl transferase [Nannochloropsi... [more]
gi|570325495|gb|ETO73443.1|1.678e-3637.00hypothetical protein F444_10623 [Phytophthora para... [more]
gi|675169389|ref|XP_008893579.1|1.849e-3637.00hypothetical protein PPTG_01938 [Phytophthora para... [more]
gi|566021867|gb|ETI44778.1|1.888e-3637.00hypothetical protein F443_10533 [Phytophthora para... [more]
gi|567959210|gb|ETK84787.1|1.907e-3637.00hypothetical protein L915_10290 [Phytophthora para... [more]
gi|568017124|gb|ETL91301.1|2.789e-3637.00hypothetical protein L917_10130 [Phytophthora para... [more]
gi|568047569|gb|ETM44647.1|2.917e-3637.00hypothetical protein L914_10152 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2947rna2947Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications