EWM27714.1, cds2931 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27714.1 vs. NCBI_GenBank
Match: gi|585109987|gb|EWM27714.1| (Methyltransferase FkbM [Nannochloropsis gaditana]) HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query: 1 MPKKWHCYEKTRAWSLAFPSILLLLFVSQLWWHFDDITCTGRSSINGKCTTRLANAILEKEIWQDVENDSPDKDMHLASPTAHLKTEFQVASPGYPHGILEYVTKTHNGEKAVTESFHHIIAATKCNGLVLDIGANTGFYSMLTLSEGCKHVVSFDPQPSCVRHIEHGLVKNDFKHGAIVPRPVDYVSGRTLELNPKYDCAGRWPVLQHEGKAPDPADLIKVETVTLTETLPYNSYISLAKVDTEGAEYRVLLAMMPFDRQGVIDQFVSLVRDHGFSCRPLEIFPWAANDFYTKENVTGLAKRIDSAVQLNICFITIRFNTEQIGSDGIRLTYCLV 336
MPKKWHCYEKTRAWSLAFPSILLLLFVSQLWWHFDDITCTGRSSINGKCTTRLANAILEKEIWQDVENDSPDKDMHLASPTAHLKTEFQVASPGYPHGILEYVTKTHNGEKAVTESFHHIIAATKCNGLVLDIGANTGFYSMLTLSEGCKHVVSFDPQPSCVRHIEHGLVKNDFKHGAIVPRPVDYVSGRTLELNPKYDCAGRWPVLQHEGKAPDPADLIKVETVTLTETLPYNSYISLAKVDTEGAEYRVLLAMMPFDRQGVIDQFVSLVRDHGFSCRPLEIFPWAANDFYTKENVTGLAKRIDSAVQLNICFITIRFNTEQIGSDGIRLTYCLV
Sbjct: 1 MPKKWHCYEKTRAWSLAFPSILLLLFVSQLWWHFDDITCTGRSSINGKCTTRLANAILEKEIWQDVENDSPDKDMHLASPTAHLKTEFQVASPGYPHGILEYVTKTHNGEKAVTESFHHIIAATKCNGLVLDIGANTGFYSMLTLSEGCKHVVSFDPQPSCVRHIEHGLVKNDFKHGAIVPRPVDYVSGRTLELNPKYDCAGRWPVLQHEGKAPDPADLIKVETVTLTETLPYNSYISLAKVDTEGAEYRVLLAMMPFDRQGVIDQFVSLVRDHGFSCRPLEIFPWAANDFYTKENVTGLAKRIDSAVQLNICFITIRFNTEQIGSDGIRLTYCLV 336
BLAST of EWM27714.1 vs. NCBI_GenBank
Match: gi|1129180405|gb|OLP87971.1| (Succinate semialdehyde dehydrogenase [NAD(P)+] Sad [Symbiodinium microadriaticum]) HSP 1 Score: 68.5514 bits (166), Expect = 5.002e-9 Identity = 58/184 (31.52%), Postives = 84/184 (45.65%), Query Frame = 0
Query: 108 NGEKAVTESFHHIIAATKC-----------NGLVLDIGANTGFYSMLTLSEGCKHVVSFDPQPSCVRHI-----EHGLVKNDFKHGAIVPRPVDYVS--GRTLELNPKYDCAGRWPVLQHE-------GKAPDPAD--------LIKVETVTLTETLPYNSYISLAKVDTEGAEYRVLLAMMPF 258
GE+ V + FH + T C +VLDIG+NTGFY +L L++GC VV +PQP C I E GL + + V +PV G++L + C+GR+P+ E G + AD + V + L +S I L K+DTE E ++L AM+P
Sbjct: 15 KGEQFVQDIFHQTLD-TICRVDMSPSEAWEKAVVLDIGSNTGFYGLLALAKGCA-VVFVEPQPECNALISWSIRESGLDERKVRR---VQQPVGREEEWGKSLTVQSDNHCSGRFPIENAERGHKDAYGSSAGSADSKASMQIPFLPVSNMLELVGLNASSKIQLIKIDTEVNELQILEAMLPL 193 The following BLAST results are available for this feature:
BLAST of EWM27714.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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