EWM27725.1, cds2929 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|585109998|gb|EWM27725.1| (tetratricopeptide repeat family protein [Nannochloropsis gaditana]) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
Query: 1 MRSLICSLLKGHNTQCQGTRLVASGSLWSTRMPVFALMIGSCTSASILLNSPRASHVQHRLFLSSCHRSFRKETECEADLEDVDKMRNLDVRQPSMETEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRDGDGSKSVGMIHEEKPN 381
MRSLICSLLKGHNTQCQGTRLVASGSLWSTRMPVFALMIGSCTSASILLNSPRASHVQHRLFLSSCHRSFRKETECEADLEDVDKMRNLDVRQPSMETEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRDGDGSKSVGMIHEEKPN
Sbjct: 1 MRSLICSLLKGHNTQCQGTRLVASGSLWSTRMPVFALMIGSCTSASILLNSPRASHVQHRLFLSSCHRSFRKETECEADLEDVDKMRNLDVRQPSMETEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRDGDGSKSVGMIHEEKPN 381
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|585109997|gb|EWM27724.1| (tetratricopeptide repeat family protein [Nannochloropsis gaditana]) HSP 1 Score: 357.836 bits (917), Expect = 5.715e-120 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
Query: 201 QQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRDGDGSKSVGMIHEEKPN 381
+ AEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRDGDGSKSVGMIHEEKPN
Sbjct: 100 KDAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRDGDGSKSVGMIHEEKPN 280 HSP 2 Score: 227.639 bits (579), Expect = 6.654e-69 Identity = 140/273 (51.28%), Postives = 174/273 (63.74%), Query Frame = 0
Query: 1 MRSLICSLLKGHNTQCQGTRLVASGSLWSTRMPVFALMIGSCTSASILLNSPRASHVQHRLFLSSCHRSFRKETECEADLEDVDKMRNLDVRQPSMETEKDVGL---ALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALD-TYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASI------LQRTGRGVEAE 263
MRSLICSLLKGHNTQCQGTRLVASGSLWSTRMPVFALMIGSCTSASILLNSPRASHVQHRLFLSSCHRSFRKETECEADLEDVDKMRNLDVRQPSMETEKD E L++ + T L+ L ++ L L +D P + +N+A + + T +A + +++ G ATA+NNLG +L++ + G E+ AL+ +E L IR L + P ++ + +NLA + L+ GR ++ E
Sbjct: 1 MRSLICSLLKGHNTQCQGTRLVASGSLWSTRMPVFALMIGSCTSASILLNSPRASHVQHRLFLSSCHRSFRKETECEADLEDVDKMRNLDVRQPSMETEKDAEANKGGKMEALALFESAEAT--LREVLVIRAQL---LEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLG--YLLKEE------GRLGESRALY-------KEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDE 253
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|669160368|ref|XP_008615746.1| (hypothetical protein SDRG_11481 [Saprolegnia diclina VS20] >gi|530732480|gb|EQC30722.1| hypothetical protein SDRG_11481 [Saprolegnia diclina VS20]) HSP 1 Score: 158.688 bits (400), Expect = 7.395e-42 Identity = 101/274 (36.86%), Postives = 155/274 (56.57%), Query Frame = 0
Query: 97 ETEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRDGDGSK 370
+TE ++ ++V++ Y +G + AL ++L +D ++ G DHPVYAS LNN+ALM K ++L DA+ Y AL YK VG H S+AT L+NLG V+ +Q+ + K+EAL ++A +E L IR + L +D P + SN+ +L T + + EEM+ + R+Q K G+ S A AMNN+G + KE G+L E+ AL++ IR A EH I +++N AE L G + E LQ +IL ++ P+ D D S+
Sbjct: 51 DTESNIAGMQQKVREFYTQGDFEAALDMALLCRDTVKDHFGTDHPVYASTLNNIALMQKNLSQLTDAIATYEEALRVYKECVGEGHASFATTLHNLGGVYRLQSHVLSGMQ--KVEAL---DNALDCFQESLRIRKENLANDHPDIAIGMSNVGMLLWHTHKKEKGEEMVVEAMERLQAKL-GRDSTLTALAMNNVGIVYKELGKLDEAIALFQATTEIREAKLGLEHMETITAMHNWAE-ALRAAGRDDEAAVLQTQILAVVGPMDEDEDSSQ 317
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|813101668|ref|XP_012193580.1| (hypothetical protein SPRG_00074 [Saprolegnia parasitica CBS 223.65] >gi|641541484|gb|KDO35229.1| hypothetical protein SPRG_00074 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 154.451 bits (389), Expect = 3.010e-40 Identity = 100/276 (36.23%), Postives = 156/276 (56.52%), Query Frame = 0
Query: 97 ETEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRD-GDGSKS 371
+TE ++ ++V++ Y +G + AL ++L +D ++ G DHPVYAS LNN+ALM K ++L DA+ Y AL YK VG H S+AT L+NLG V+ +Q+ + K+EAL ++A +E L IR + L +D P + SN+ +L T + + EEM+ + R+Q K G+ S A AMNN+G + KE G+L E+ L++ IR A EH I +++N AE L G + E LQ +IL ++ P+ D G+ S++
Sbjct: 51 DTESNIAGMQQKVREFYTQGDFEAALDMALICRDTVKDHFGNDHPVYASTLNNIALMQKNLSQLTDAIATYEEALRVYKECVGEGHASFATTLHNLGGVYRLQSHVLSGMQ--KVEAL---DNALDCFQESLRIRKENLANDHPDIAIGMSNVGMLLWHTHKKEKGEEMVVEAMERLQAKL-GRDSTLTALAMNNVGIVYKELGKLDEAIDLFQATTEIREAKLGLEHMETITAMHNWAE-ALRAAGRDDEAAVLQTQILAVVGPMDEDEGNSSQT 319
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|635370826|emb|CCI41089.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 148.288 bits (373), Expect = 5.800e-38 Identity = 101/276 (36.59%), Postives = 147/276 (53.26%), Query Frame = 0
Query: 96 METEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASI---LQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPVRRDGDG 368
+E E+D+ +++ Y GKY +AL VS+ +D + G+ H VYAS ++N+ALM+K ++E+AV Y AL+ Y++SVG H SYAT L NLG V+ AQ A KG ME L + A E IR L+ + P + T NL + L++ +GV EM++ R+ E+ G A AMNNL ++ KE R E+ ALY+E + RR L HP I++ +NLAE G E + +Q+EIL L + DG
Sbjct: 55 VEVEQDIATLQHRIREAYTAGKYQDALDVSVECRDLAQSHFGDSHAVYASTISNIALMYKSLGKMEEAVESYQHALEVYEKSVGKQHASYATTLFNLGAVYRTVAQSA---KG--MERLQAHQQAIDCFEETYKIRRANLDSNHPDIALTECNLGLLYWYLKQQKKGV---EMLQNAKVRL-EQVYGVKHVSTALAMNNLAFVYKESERYDEAIALYQEVVATRRELLGSRHPESILAQHNLAE-AFRAAGNEIKALEVQNEILSLYEEA-SNADG 319
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|566019072|gb|ETI41983.1| (hypothetical protein F443_12825 [Phytophthora parasitica P1569] >gi|568014481|gb|ETL88658.1| hypothetical protein L917_12285 [Phytophthora parasitica]) HSP 1 Score: 148.288 bits (373), Expect = 5.860e-38 Identity = 96/267 (35.96%), Postives = 142/267 (53.18%), Query Frame = 0
Query: 96 METEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQ--EKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLN 360
++ E+D+ + RE++D Y G Y AL L +D ++ GE+HPVYAS + N+ALM+K ++E+AV Y AL TYK SVG H S+AT L NLGLV+ +A A ME ++ A E L IR +LE P + + SN+ I + ++E+ T + V EK G S A A NNL Y KE GE+ LY++ L +R+ + H I++ +NLAE + G E + +Q+EIL+L +
Sbjct: 58 VQVEQDIAVMQREIRDAYNSGDYQAALDAGLQCRDLVKSHFGENHPVYASTVTNIALMYKNLGQMEEAVEAYEFALQTYKASVGEQHASFATTLYNLGLVY-----RALAISSSGMERVSALHRALECFEESLKIRRNILEPGHPDIALSMSNMGVI---HWQNKQSEKAFATLVEAVDLLEKKVGPNSSLTALAKNNLAYAKKEAREYGEAIKLYEDVLNVRKQVLGSAHNETIMARHNLAE-AYRSSGNEDKAVEIQNEILELFD 315
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|673025284|ref|XP_008866603.1| (hypothetical protein H310_04167 [Aphanomyces invadans] >gi|574478169|gb|ETW05165.1| hypothetical protein H310_04167 [Aphanomyces invadans]) HSP 1 Score: 147.132 bits (370), Expect = 1.339e-37 Identity = 92/271 (33.95%), Postives = 146/271 (53.87%), Query Frame = 0
Query: 92 RQPSMETEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLNPV 362
R M E D+ +++++LY +G + L+++ +D + G+DHPVYAS LNN+ALM K ++L++A+ Y AL YK VG NH S+AT L+NLG V+ +QA K K+E L + A E L +R ++L D P + + N+ + T + +AEEM+ + R++ K G SP A A NNLG + KE G+ + L+ +A +R+A + H I +++N AE L G + + +Q IL L+ V
Sbjct: 42 RNDYMVVEADIAGMQKKIRELYSKGDFVSGLEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRVYKSCVGENHASWATTLHNLGGVYRLQAHSLSGMK--KVEGL---DHALECFEESLRVRREILAADHPDIAMSMCNVGMLYWHTHKKEKAEEMLVEAVERLEAKV-GATSPLTALAWNNLGIVYKELGKFDAAIELFAKATAVRKAALGELHVETITTMHNWAE-ALRASGRDDDAAEIQKTILDLVGDV 305
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|570946469|gb|ETP11726.1| (hypothetical protein F441_12785 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 147.132 bits (370), Expect = 1.518e-37 Identity = 93/265 (35.09%), Postives = 142/265 (53.58%), Query Frame = 0
Query: 96 METEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLN 360
++ E+D+ + RE++D Y G Y AL L +D ++ GE+HPVYAS + N+ALM+K ++E+AV Y AL TYK SVG H S+AT L NLGLV+ +A A ME ++ A E L IR +LE P + + SN+ I + + +A + + +++K G S A A NNL Y KE GE+ LY++ L +R+ + H I++ +NLAE + G E + +Q+EIL+L +
Sbjct: 58 VQVEQDIAVMQREIRDAYNSGDYQAALDAGLQCRDLVKSHFGENHPVYASTVTNIALMYKNLGQMEEAVEAYEFALQTYKASVGEQHASFATTLYNLGLVY-----RALAISSSGMERVSALHRALECFEESLKIRRNILEPGHPDIALSMSNMGVIHWQNKQSEKAFAALVEAVDLLEKKV-GPNSSLTALAKNNLAYAKKEAREYGEAIKLYEDVLNVRKQVLGSAHNETIMARHNLAE-AYRSSGNEDKAVEIQNEILELFD 315
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|970642202|gb|KUF83968.1| (Nephrocystin-3 [Phytophthora nicotianae] >gi|970653648|gb|KUF92089.1| Nephrocystin-3 [Phytophthora nicotianae]) HSP 1 Score: 147.132 bits (370), Expect = 1.612e-37 Identity = 93/265 (35.09%), Postives = 142/265 (53.58%), Query Frame = 0
Query: 96 METEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLN 360
++ E+D+ + RE++D Y G Y AL L +D ++ GE+HPVYAS + N+ALM+K ++E+AV Y AL TYK SVG H S+AT L NLGLV+ +A A ME ++ A E L IR +LE P + + SN+ I + + +A + + +++K G S A A NNL Y KE GE+ LY++ L +R+ + H I++ +NLAE + G E + +Q+EIL+L +
Sbjct: 57 VQVEQDIAVMQREIRDAYNSGDYQAALDAGLQCRDLVKSHFGENHPVYASTVTNIALMYKNLGQMEEAVEAYEFALQTYKASVGEQHASFATTLYNLGLVY-----RALAISSSGMERVSALHRALECFEESLKIRRNILEPGHPDIALSMSNMGVIHWQNKQSEKAFAALVEAVDLLEKKV-GPNSSLTALAKNNLAYAKKEAREYGEAIKLYEDVLNVRKQVLGSAHNETIMARHNLAE-AYRSSGNEDKAVEIQNEILELFD 314
BLAST of EWM27725.1 vs. NCBI_GenBank
Match: gi|568044707|gb|ETM41901.1| (hypothetical protein L914_12366 [Phytophthora parasitica]) HSP 1 Score: 147.132 bits (370), Expect = 1.720e-37 Identity = 93/265 (35.09%), Postives = 142/265 (53.58%), Query Frame = 0
Query: 96 METEKDVGLALREVQDLYKEGKYTEALQVSLGMKDWLERELGEDHPVYASCLNNVALMHKMTNELEDAVHYYAMALDTYKRSVGVNHRSYATALNNLGLVFLMQAQQAEANKGGKMEALALFESAEATLREVLVIRAQLLEDDDPALLTTRSNLASILQRTGRGVEAEEMMRTTISRVQEKARGKASPEVATAMNNLGYLLKEEGRLGESRALYKEALRIRRALYPKEHPLVIVSLNNLAELCLVTPGLEGEGRALQDEILKLLN 360
++ E+D+ + RE++D Y G Y AL L +D ++ GE+HPVYAS + N+ALM+K ++E+AV Y AL TYK SVG H S+AT L NLGLV+ +A A ME ++ A E L IR +LE P + + SN+ I + + +A + + +++K G S A A NNL Y KE GE+ LY++ L +R+ + H I++ +NLAE + G E + +Q+EIL+L +
Sbjct: 58 VQVEQDIAVMQREIRDAYNSGDYQAALDAGLQCRDLVKSHFGENHPVYASTVTNIALMYKNLGQMEEAVEAYEFALQTYKASVGEQHASFATTLYNLGLVY-----RALAISSSGMERVSALHRALECFEESLKIRRNILEPGHPDIALSMSNMGVIHWQNKQSEKAFAALVEAVDLLEKKV-GPNSSLTALAKNNLAYAKKEAREYGEAIKLYEDVLNVRKQVLGSAHNETIMARHNLAE-AYRSSGNEDKAVEIQNEILELFD 315 The following BLAST results are available for this feature:
BLAST of EWM27725.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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