EWM27764.1, cds2907 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27764.1 vs. NCBI_GenBank
Match: gi|585110042|gb|EWM27764.1| (TRAPP II complex, Trs120 protein [Nannochloropsis gaditana]) HSP 1 Score: 362.459 bits (929), Expect = 7.206e-127 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 Query: 1 MNVLHHAEEEPNSFAAHRQLRVAVVPLGGVPGARFRVYLSLLRRSFHELPMANLSKPGSWKKESSPFKHFSWFDGNLLLQYLDRAPPSTSASSEWQDFQAFRRTWAVSPQRLFLVKYLFIQALASDAYHFARFIASHCPGRTSGAALPLCSSPAGSAFRYQMPVCWSGCTLDFIHS 176 MNVLHHAEEEPNSFAAHRQLRVAVVPLGGVPGARFRVYLSLLRRSFHELPMANLSKPGSWKKESSPFKHFSWFDGNLLLQYLDRAPPSTSASSEWQDFQAFRRTWAVSPQRLFLVKYLFIQALASDAYHFARFIASHCPGRTSGAALPLCSSPAGSAFRYQMPVCWSGCTLDFIHS Sbjct: 1 MNVLHHAEEEPNSFAAHRQLRVAVVPLGGVPGARFRVYLSLLRRSFHELPMANLSKPGSWKKESSPFKHFSWFDGNLLLQYLDRAPPSTSASSEWQDFQAFRRTWAVSPQRLFLVKYLFIQALASDAYHFARFIASHCPGRTSGAALPLCSSPAGSAFRYQMPVCWSGCTLDFIHS 176
BLAST of EWM27764.1 vs. NCBI_GenBank
Match: gi|299115529|emb|CBN75733.1| (OSJNBa0029H02.30 [Ectocarpus siliculosus]) HSP 1 Score: 77.7962 bits (190), Expect = 1.421e-13 Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0 Query: 16 AHRQLRVAVVPLGGVPGARFRVYLSLLRRSFHELPMANLSKPGSWKKESSPFKHFSWFDGNLLLQYLDRAPPSTSASSEWQDFQAFRRT 104 +HR +V +VPLG +P + Y +LRR F +PM NL+ PG W +++S KHF+W +G ++D+ + S+W+D+QA+RR Sbjct: 14 SHRSAQVLLVPLGNIPPDVYAKYCEILRR-FSTIPMQNLTAPGDWNRQNSALKHFNWSEGCFNFHFIDQ-DTTDGGLSDWEDYQAYRRV 100
BLAST of EWM27764.1 vs. NCBI_GenBank
Match: gi|330804027|ref|XP_003290001.1| (hypothetical protein DICPUDRAFT_154468 [Dictyostelium purpureum] >gi|325079899|gb|EGC33478.1| hypothetical protein DICPUDRAFT_154468 [Dictyostelium purpureum]) HSP 1 Score: 63.929 bits (154), Expect = 1.185e-8 Identity = 33/118 (27.97%), Postives = 66/118 (55.93%), Query Frame = 0 Query: 13 SFAAHRQLRVAVVPLGGVPGARFRVYLSLLRRSFHELPMANLSKPGSWKKESSPFKHFSWFDGNLLLQYLDRAPPSTSASSEWQDFQAFRRTWAV-------SPQRLFLVKYLFIQAL 123 +F +R ++V ++P+G + +++ Y SL++ + + LS + ES+PF+ SW DG++LL ++D S+ SE+++FQ +++ + V + L + K LF QA+ Sbjct: 6 TFTENRSIKVIILPIGDISPEKYKEYTSLIK----TINIIELSSITRSQNESTPFEKISWVDGSMLLNFVD---ASSYQRSEYEEFQTYKKVFGVIGVVDCKKSKDLMVTKKLFEQAV 116 The following BLAST results are available for this feature:
BLAST of EWM27764.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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